[Blends-commit] [Git][blends-team/science][master] Add cwlformat to workflows

2020-12-04 Thread Andreas Tille


Andreas Tille pushed to branch master at Debian Blends Team / science


Commits:
6116795d by Andreas Tille at 2020-12-04T15:43:24+01:00
Add cwlformat to workflows

- - - - -


1 changed file:

- tasks/workflow


Changes:

=
tasks/workflow
=
@@ -12,6 +12,8 @@ Recommends: snakemake
 
 Recommends: cwltool
 
+Suggests: cwlformat
+
 Recommends: coop-computing-tools
 
 #Recommends: python-nipype



View it on GitLab: 
https://salsa.debian.org/blends-team/science/-/commit/6116795df0d93c8c6d21676874bf53fb6e3f3b54

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[Blends-commit] [Git][blends-team/med][master] Update bio-dev - added all the qiime packages

2020-12-04 Thread Steffen Möller


Steffen Möller pushed to branch master at Debian Blends Team / med


Commits:
e056dc1d by Steffen Möller at 2020-12-02T22:29:18+00:00
Update bio-dev - added all the qiime packages
- - - - -


1 changed file:

- tasks/bio-dev


Changes:

=
tasks/bio-dev
=
@@ -24,6 +24,8 @@ Suggests: python3-biopython-sql, python-biopython-doc
 
 Suggests: python3-cogent3
 
+Suggests: python3-mcaller
+
 Suggests: python3-joypy
 
 Suggests: python3-ncls
@@ -101,6 +103,34 @@ Remark: Fork from jebl
  http://sourceforge.net/projects/jebl/ to develop a new API and class
  library.
 
+Suggests: qiime,
+  q2-alignment,
+  q2-composition,
+  q2-cutadapt
+  q2-dada2,
+  q2-deblur,
+  q2-demux,
+  q2-diversity,
+  q2-emperor,
+  q2-feature-classifier,
+  q2-feature-table,
+  q2-fragment-insertion,
+  q2-gneiss,
+  q2-longitudinal,
+  q2-metadata,
+  q2-phylogeny,
+  q2-quality-control,
+  q2-quality-filter,
+  q2-sample-classifier,
+  q2-shogun,
+  q2-taxa,
+  q2-types,
+  q2-vsearch,
+  q2cli,
+  q2cwl,
+  q2lint,
+  q2templates
+
 Suggests: r-bioc-affy,
   r-bioc-affyio,
   r-bioc-altcdfenvs,
@@ -275,8 +305,6 @@ Suggests: r-cran-venndiagram
 
 Recommends: r-cran-webgestaltr
 
-
-
 Recommends: r-other-hms-dbmi-spp
 
 Recommends: r-other-apmswapp



View it on GitLab: 
https://salsa.debian.org/blends-team/med/-/commit/e056dc1de9486da0086ae5f086950ed0e08cf777

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