Re: [ccp4bb] handling crystals in volatile solvents

2015-06-16 Thread Patrick Shaw Stewart
Hi Len

In every case that I know of this problem has been solved by working under
oil.  The oil becomes saturated with the volatiles, and it prevents
crystals from doing backstroke, breaststroke or front crawl during
harvesting.

The most convenient way to get going is to dispense the wells without the
volatile solvents, then allow solvents to difuse through the oil and into
the drops.  We suggest our old Vapor Batch plates, and you should place the
same concentration of the solvent that you want in the drops into the large
moat around the plate.  If you put in higher concentrations you may
dehydrate your drops :-(

A very nice feature is that you can set up e.g. a random screen, then try
soaking in one or more volatile solvents if nothing grows in the first
round.

The approach was invented by Lesley Haire, and you can find her
presentation at

http://www.douglas.co.uk/winner1.htm



See also

Mortuza, Gulnahar B., et al. High-resolution structure of a retroviral
capsid hexameric
amino-terminal domain. *Nature* 431.7007 (2004): 481-485.



The plates look like this:

http://www.douglas.co.uk/products.htm#Vapor Batch Plates



We'll send you some sample plates to try.

Best wishes,

Patrick



On 12 June 2015 at 22:11, Thomas, Leonard M. lmtho...@ou.edu wrote:

 Hi All,

 We have gotten some very nicely formed crystals out of a couple of
 different volatile solvents recently.  Besides looking for something easier
 to work in does anybody have any tips on handling crystals from these types
 of solvents.  It is very hard to loop a crystal while it is doing the
 backstroke in the well with all of its buddies.

 Thanks in advance.
 Len

 Leonard M. Thomas Ph.D.
 Macromolecular Crystallography Laboratory Manager
 University of Oklahoma
 Department of Chemistry and Biochemistry
 Stephenson Life Sciences Research Center
 101 Stephenson Parkway
 Norman, OK 73019
 405-325-1126
 lmtho...@ou.edu
 http://barlywine.chem.ou.edu
 http://structuralbiology.ou.edu




-- 
 patr...@douglas.co.ukDouglas Instruments Ltd.
 Douglas House, East Garston, Hungerford, Berkshire, RG17 7HD, UK
 Directors: Peter Baldock, Patrick Shaw Stewart

 http://www.douglas.co.uk
 Tel: 44 (0) 148-864-9090US toll-free 1-877-225-2034
 Regd. England 2177994, VAT Reg. GB 480 7371 36


Re: [ccp4bb] handling crystals in volatile solvents

2015-06-12 Thread Tanner, John J.
This paper might be helpful.

1. J Struct Biol. 2014 Nov;188(2):102-6. doi: 10.1016/j.jsb.2014.09.011. Epub 
2014
Oct 5.

Efficient cryoprotection of macromolecular crystals using vapor diffusion of
volatile alcohols.

Farley C, Juers DH.

Author information:
(1)Department of Physics, Whitman College, Walla Walla, WA 99362, United States.
(2)Department of Physics, Whitman College, Walla Walla, WA 99362, United States;
Program in Biochemistry, Biophysics and Molecular Biology, Whitman College, 
Walla
Walla, WA 99362, United States. Electronic address: 
juer...@whitman.edumailto:juer...@whitman.edu.

Macromolecular X-ray crystallography, usually done at cryogenic temperature to
limit radiation damage, often requires liquid cryoprotective soaking that can be
labor intensive and damaging to crystals. Here we describe a method for
cryoprotection that uses vapor diffusion of volatile cryoprotective agents into
loop-mounted crystals. The crystal is mounted into a vial containing a small
volume of an alcohol-based cryosolution. After a short incubation with the 
looped
crystal sitting in the cryosolution vapor, the crystal is transferred directly
from the vial into the cooling medium. Effective for several different protein
crystals, the approach obviates the need for liquid soaking and opens up a
heretofore underutilized class of cryoprotective agents for macromolecular
crystallography.

PMCID: PMC4252874 [Available on 2015-11-01]
PMID: 25286441  [PubMed - in process]

John J. Tanner
Professor of Biochemistry and Chemistry
Chair, Biochemistry Department Graduate Admissions Committee
University of Missouri-Columbia
125 Chemistry Building
Columbia, MO 65211
Phone: 573-884-1280
Fax: 573-882-2754
Email: tanne...@missouri.edumailto:tanne...@missouri.edu
http://faculty.missouri.edu/~tannerjj/tannergroup/tanner.html

On Jun 12, 2015, at 4:11 PM, Thomas, Leonard M. 
lmtho...@ou.edumailto:lmtho...@ou.edu
 wrote:

Hi All,

We have gotten some very nicely formed crystals out of a couple of different 
volatile solvents recently.  Besides looking for something easier to work in 
does anybody have any tips on handling crystals from these types of solvents.  
It is very hard to loop a crystal while it is doing the backstroke in the well 
with all of its buddies.

Thanks in advance.
Len

Leonard M. Thomas Ph.D.
Macromolecular Crystallography Laboratory Manager
University of Oklahoma
Department of Chemistry and Biochemistry
Stephenson Life Sciences Research Center
101 Stephenson Parkway
Norman, OK 73019
405-325-1126
lmtho...@ou.edumailto:lmtho...@ou.edu
http://barlywine.chem.ou.edu
http://structuralbiology.ou.edu



[ccp4bb] handling crystals in volatile solvents

2015-06-12 Thread Thomas, Leonard M.
Hi All,

We have gotten some very nicely formed crystals out of a couple of different 
volatile solvents recently.  Besides looking for something easier to work in 
does anybody have any tips on handling crystals from these types of solvents.  
It is very hard to loop a crystal while it is doing the backstroke in the well 
with all of its buddies.  

Thanks in advance.
Len

Leonard M. Thomas Ph.D.
Macromolecular Crystallography Laboratory Manager
University of Oklahoma
Department of Chemistry and Biochemistry
Stephenson Life Sciences Research Center
101 Stephenson Parkway
Norman, OK 73019
405-325-1126
lmtho...@ou.edu
http://barlywine.chem.ou.edu
http://structuralbiology.ou.edu