Re: [CentOS] Yum Segfaulting

2012-12-19 Thread Ken Smith
James Pearson wrote:
 Ken Smith wrote:

 On both the faulty system and a good one, yum appears to hunt for
 various versions of python files.

 Anyone with more knowledge than I have of system calls, is there a clue
 in here?
  
 You could try flushing the file system cache:

echo 3  /proc/sys/vm/drop_caches

 (or reboot) and try again ?

 James Pearson

Hi James, brilliant echo 3  /proc/sys/vm/drop_caches worked. So does 
that mean that there wasn't enough free memory for yum to run?

Thanks

Ken



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Re: [CentOS] Yum Segfaulting

2012-12-19 Thread James Pearson
Ken Smith wrote:
 
 Hi James, brilliant echo 3  /proc/sys/vm/drop_caches worked. So does 
 that mean that there wasn't enough free memory for yum to run?

No, it might mean that there was a 'corruption' of the in-memory copy of 
'something' used by yum/python

The above command flushes the file system cache - so the 'something' has 
to be read back into memory from disk again (I have no idea what this 
'something' is ...)

I guess this 'corruption' (if it is indeed a corruption) shouldn't 
happen - but I have noticed this with yum before - and flushing the 
cache in this way generally 'fixes' the issue for me

James Pearson
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Re: [CentOS] Yum Segfaulting

2012-12-19 Thread Ken Smith

James Pearson wrote:
 Ken Smith wrote:

 Hi James, brilliant echo 3  /proc/sys/vm/drop_caches worked. So 
 does that mean that there wasn't enough free memory for yum to run?

 No, it might mean that there was a 'corruption' of the in-memory copy 
 of 'something' used by yum/python


I had wondered about memory integrity so I had run a memory test - that 
passed. Oh well.

Thanks

Ken

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Re: [CentOS] Yum Segfaulting

2012-12-18 Thread Ken Smith
Reindl Harald wrote:


 Am 18.12.2012 19:41, schrieb Ken Smith:
 Hi All, I have a Centos 5.8 system with relatively little memory, that
 runs in rl3, where yum has decided not to work any more.
{snip}

 Any ideas where to look - I'm a bit stumped

 at least with dmesg and in /var/log/messages where ANY
 useful information will be found if problems happening

Indeed. Nothing is getting logged to messages.

Here are the last few system calls logged by running yum via strace

open(/usr/lib/python2.4/_socketmodule.so, O_RDONLY|O_LARGEFILE) = -1 
ENOENT (No such file or directory)
open(/usr/lib/python2.4/_socket.py, O_RDONLY|O_LARGEFILE) = -1 ENOENT 
(No such file or directory)
open(/usr/lib/python2.4/_socket.pyc, O_RDONLY|O_LARGEFILE) = -1 ENOENT 
(No such file or directory)
stat64(/usr/lib/python2.4/plat-linux2/_socket, 0xbfdb3954) = -1 ENOENT 
(No such file or directory)
open(/usr/lib/python2.4/plat-linux2/_socket.so, O_RDONLY|O_LARGEFILE) 
= -1 ENOENT (No such file or directory)
open(/usr/lib/python2.4/plat-linux2/_socketmodule.so, 
O_RDONLY|O_LARGEFILE) = -1 ENOENT (No such file or directory)
open(/usr/lib/python2.4/plat-linux2/_socket.py, O_RDONLY|O_LARGEFILE) 
= -1 ENOENT (No such file or directory)
open(/usr/lib/python2.4/plat-linux2/_socket.pyc, O_RDONLY|O_LARGEFILE) 
= -1 ENOENT (No such file or directory)
stat64(/usr/lib/python2.4/lib-tk/_socket, 0xbfdb3954) = -1 ENOENT (No 
such file or directory)
open(/usr/lib/python2.4/lib-tk/_socket.so, O_RDONLY|O_LARGEFILE) = -1 
ENOENT (No such file or directory)
open(/usr/lib/python2.4/lib-tk/_socketmodule.so, O_RDONLY|O_LARGEFILE) 
= -1 ENOENT (No such file or directory)
open(/usr/lib/python2.4/lib-tk/_socket.py, O_RDONLY|O_LARGEFILE) = -1 
ENOENT (No such file or directory)
open(/usr/lib/python2.4/lib-tk/_socket.pyc, O_RDONLY|O_LARGEFILE) = -1 
ENOENT (No such file or directory)
stat64(/usr/lib/python2.4/lib-dynload/_socket, 0xbfdb3954) = -1 ENOENT 
(No such file or directory)
open(/usr/lib/python2.4/lib-dynload/_socket.so, O_RDONLY|O_LARGEFILE) 
= -1 ENOENT (No such file or directory)
open(/usr/lib/python2.4/lib-dynload/_socketmodule.so, 
O_RDONLY|O_LARGEFILE) = 7
fstat64(7, {st_mode=S_IFREG|0555, st_size=49268, ...}) = 0
open(/usr/lib/python2.4/lib-dynload/_socketmodule.so, O_RDONLY) = 8
read(8, 
\177ELF\1\1\1\0\0\0\0\0\0\0\0\0\3\0\3\0\1\0\0\0\240\33\0\0004\0\0\0..., 512) 
= 512
fstat64(8, {st_mode=S_IFREG|0555, st_size=49268, ...}) = 0
mmap2(NULL, 48008, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 8, 0) 
= 0xdcc000
mmap2(0xdd5000, 12288, PROT_READ|PROT_WRITE, 
MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 8, 0x9) = 0xdd5000
close(8)= 0
--- SIGSEGV (Segmentation fault) @ 0 (0) ---
+++ killed by SIGSEGV +++


whereas on a good system, albeit 64 bit, it proceds beyond that point, 
as follows...


open(/usr/lib64/python2.4/lib-dynload/_socketmodule.so, O_RDONLY) = 7
fstat(7, {st_mode=S_IFREG|0555, st_size=52152, ...}) = 0
open(/usr/lib64/python2.4/lib-dynload/_socketmodule.so, O_RDONLY) = 8
read(8, 
\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0\0\1\0\0\0`.\0\0\0\0\0\0..., 832) 
= 832
fstat(8, {st_mode=S_IFREG|0555, st_size=52152, ...}) = 0
mmap(NULL, 2147440, PROT_READ|PROT_EXEC, MAP_PRIVATE|MAP_DENYWRITE, 8, 
0) = 0x2ae0a0858000
mprotect(0x2ae0a0862000, 2093056, PROT_NONE) = 0
mmap(0x2ae0a0a61000, 16384, PROT_READ|PROT_WRITE, 
MAP_PRIVATE|MAP_FIXED|MAP_DENYWRITE, 8, 0x9000) = 0x2ae0a0a61000
close(8)= 0
mmap(NULL, 266240, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 
0) = 0x2ae0a0a65000
close(7)= 0


On both the faulty system and a good one, yum appears to hunt for 
various versions of python files.

Anyone with more knowledge that I have of system calls, is there a clue 
in here?

Thanks

Ken

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Re: [CentOS] Yum Segfaulting

2012-12-18 Thread James Pearson
Ken Smith wrote:
 
 On both the faulty system and a good one, yum appears to hunt for 
 various versions of python files.
 
 Anyone with more knowledge that I have of system calls, is there a clue 
 in here?

You could try flushing the file system cache:

  echo 3  /proc/sys/vm/drop_caches

(or reboot) and try again ?

James Pearson
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