Hi Dale The correct url for accessing files are as follows - 1. PDB file - https://www.ebi.ac.uk/pdbe/entry-files/pdb1cbs.ent 2. mmCIF file - https://www.ebi.ac.uk/pdbe/entry-files/1cbs.cif
Kind regards Sameer > On 8 Jun 2023, at 07:25, Dale Tronrud <de...@daletronrud.com> wrote: > > Hi, > > When I click on "Fetch PDB entry using Accession Code..." or "Fetch PDB & > Map using EDS..." I get > > PDB Accession Code: 3eoj > DEBUG:: extracted accession code handle mode n 1 > BL WARNING:: retrieve of url > https://www.ebi.ac.uk/pdbe-srv/view/files/3eoj.ent failed > handle_read_draw_molecule_with_recentre ("coot-download/3eoj.pdb.ent".1) > WARNING:: Error reading coot-download/3eoj.pdb.ent > > That web site, indeed, does not exist and I presume the PDBe has moved the > data. > > To the best of my knowledge this is the most recent version of WinCoot. > I've downloaded the "unstable" version 1.0.01 and it fails in the same way > (but does show a very pretty display when downloading from PDB Redo). > > I've done my best to search the "coot" and "ccp4bb" archives and don't see > mention of this problem, but my search skills are limited. > > What do I do to download PDB's and maps again? > > Dale Tronrud > > ######################################################################## > > To unsubscribe from the COOT list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 > > This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list > hosted by www.jiscmail.ac.uk, terms & conditions are available at > https://www.jiscmail.ac.uk/policyandsecurity/ ######################################################################## To unsubscribe from the COOT list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=COOT&A=1 This message was issued to members of www.jiscmail.ac.uk/COOT, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
