Re: [galaxy-dev] importing large files into local instance
Hi Have you looked into using Data Libraries, see: http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Libraries http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Uploading%20Library%20Files you get access to the data without duplication. Regards, Hans On 01/17/2012 12:35 AM, Joshua Gross wrote: Hello all-- We have set up a local version of Galaxy on our own server. On the same computer, we have a couple ~27 GB fastq files we want to use in Galaxy, but we have not figured out how to import them. Since they are on the same HDD, we imagine that there is a way to simply copy them into a folder or something. Is there a simple way to import these files? We have been unable to locate anything in the documentation that directly addresses this issue. Thanks a lot for your time! Josh Gross ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] importing large files into local instance
Hello Josh, You'll want to upload them into a Galaxy Data Library using the File system paths / Do not copy data into Galaxy approach. For details about all of the ways to upload to Galaxy data libraries, see our wiki here: http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Uploading%20Library%20Files For details about Galaxy Data Libraries in general, see our wiki here: http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Libraries Greg Von Kuster On Jan 16, 2012, at 6:35 PM, Joshua Gross wrote: Hello all-- We have set up a local version of Galaxy on our own server. On the same computer, we have a couple ~27 GB fastq files we want to use in Galaxy, but we have not figured out how to import them. Since they are on the same HDD, we imagine that there is a way to simply copy them into a folder or something. Is there a simple way to import these files? We have been unable to locate anything in the documentation that directly addresses this issue. Thanks a lot for your time! Josh Gross ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ Greg Von Kuster Galaxy Development Team g...@bx.psu.edu ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
[galaxy-dev] importing large files into local instance
Hello all-- We have set up a local version of Galaxy on our own server. On the same computer, we have a couple ~27 GB fastq files we want to use in Galaxy, but we have not figured out how to import them. Since they are on the same HDD, we imagine that there is a way to simply copy them into a folder or something. Is there a simple way to import these files? We have been unable to locate anything in the documentation that directly addresses this issue. Thanks a lot for your time! Josh Gross ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
