[gt-user] GT5.0.0 gcc32dbgpthr problem
Hello, I am trying to build GT5.0.0 from source (since binaries are not available for now). I get the following error: [globus]$ ./configure --prefix=$GLOBUS_LOCATION --with-buildopts=-verbose [globus]$ make | tee installer.log [...snip...] start - checking whether we are using the GNU C++ compiler... no checking whether /usr/bin/gcc accepts -g... no checking dependency style of /usr/bin/gcc... none checking how to run the C++ preprocessor... /usr/bin/gcc -E configure: error: C++ preprocessor /usr/bin/gcc -E fails sanity check See `config.log' for more details. gpt-build ...SKIPPING gcc32dbgpthr gpt-build Changing to /home/globus/gt5.0.0-all-source-installer/BUILD WARNING: The following flavors are not supported for this platform: gcc32dbgpthr gpt-build CHECKING BUILD DEPENDENCIES FOR globus_libtool ERROR: At least one flavor needs to be defined for package globus_libtool make: *** [globus_libtool-thr-compile] Error 2 end - ./configure --prefix=$GLOBUS_LOCATION --with-buildopts=-verbose doesn't help either. installer.log is available at http://wwwinfo.jinr.ru/~kut/gt/GT5_installer.log. Problem was solved by installing gcc-c++ rpm package (what is not mentioned at http://globus.org/toolkit/docs/latest-stable/admin/install/#gtadmin-prereq-required) Environment: OS version is Scientific Linux 4.8 $ gcc -v Reading specs from /usr/lib/gcc/i386-redhat-linux/3.4.6/specs Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --disable-checking --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-java-awt=gtk --host=i386-redhat-linux Thread model: posix gcc version 3.4.6 20060404 (Red Hat 3.4.6-11) $ make -v GNU Make 3.80 Copyright (C) 2002 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
Re: [gt-user] globus-job-status: UNKNOWN JOB STATE 0
Hi Nikolay, Strange. Yea - looks like a bug. Is that repeatable / happens for every PBS job? Are you using the SEG for PBS job monitoring? If not, try using the SEG and see what happens. http://www.globus.org/toolkit/docs/5.0/5.0.0/execution/gram5/admin/#gram5-Interface_Config_Frag-seg_module http://www.globus.org/toolkit/docs/5.0/5.0.0/execution/gram5/admin/#id2545819 -Stu On Jan 22, 2010, at Jan 22, 7:43 AM, Nikolay Kutovskiy wrote: Hello list, I have installed GRAM5 to use PBS and get the following output of globus-job-status command: $ globus-job-submit gram_hostname:2119/jobmanager-pbs /bin/hostname https://gram_hostname:51499/16073727533535086921/7782764993921513916/ [user]$ globus-job-status https://gram_hostname:51499/16073727533535086921/7782764993921513916/ UNKNOWN JOB STATE 0 [user]$ globus-job-status https://gram_hostname:51499/16073727533535086921/7782764993921513916/ UNKNOWN JOB STATE 0 [user]$ globus-job-status https://gram_hostname:51499/16073727533535086921/7782764993921513916/ UNKNOWN JOB STATE 0 [user]$ globus-job-status https://gram_hostname:51499/16073727533535086921/7782764993921513916/ DONE Is that a bug? some GRAM5|PBS misconfiguration? Commands like globus-job-run work fine. Environment: gt5.0.0-all-source-installer.tar.bz2 torque-2.3.7-1cri torque-docs-2.3.7-1cri torque-server-2.3.7-1cri torque-client-2.3.7-1cri torque-scheduler-2.3.7-1cri Thanks in advance, Nikolay
Re: [gt-user] Simple MDS Alternative
Hi, Yes, we have a team led by U. Chicago that is integrating a new set of open source tools for this purpose. Unlike the original MDS development effort, which was aimed at providing monitoring middleware, our effort is focused on the service registry problem. The goal is to provide a high-level metadata registry for services: what services are known to the system, and for each service, what does it do, who is it intended for, who is operating it, what kind of service levels does it support, where's the documentation for it, where can you get current detailed status info, etc. The data for such a system is quite simple, of course. The tricky part is building a (secure) system that allows the people who operate the services (of which there are many) to register the services and maintain their registration data themselves, but then incorporate those registrations in a variety of community-specific registries. E.g., a service at U Chicago is described by the U Chicago operators, but this info then is automatically incorporated into the (distinct) registries used by TeraGrid, OSG, CANARIE, a medical consortium, etc... Our team began by using MDS4, but we've been replacing bits and pieces of it for several years now and now have something that's more based on native Apache tools and REST interfaces. We have an effort underway to feed the results back in to Globus as a replacement for MDS, but there is currently no estimated time for when it will appear again in Globus. The project is being tracked at http://www.ci.uchicago.edu/wiki/bin/view/IIS/WebHome (a relatively new wiki for the existing project), and we have a paper on it: http://doi.acm.org/10.1145/1658260.1658271. (Sorry, I don't have an open full-text version of the paper to point you to.) -- Lee On Jan 21, 2010, at 4:47 PM, Adam Bishop wrote: Greetings, I am researching alternatives to the MDS utility previously included in the Globus 4.x toolkit. The current iteration of the Nimbus monitoring plug-ins for Nagios rely on the MDS to act as the public registry for the dynamic state of a cluster, but I would like to evaluate alternatives. The ability for various sites to submit gathered data to a single master registry which can then be queried would be ideal. Complicated query support such as XPath is necessary; simple presenting a snippet of XML is all that is required. If there been any discussion or thoughts regarding an alternative to MDS for resource publishing, I'm very interested to hear about it. Cheers, Adam Bishop University of Victoria
