Re: [HCP-Users] HCP_hp2000.RData
Thanks for posting the solution here as well.
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Tuesday, November 7, 2017 at 12:20 PM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thanks. I did and they helped.
The problem seams to be the required version for packages:
* 'kernlab' version 0.9.24
* 'ROCR' version 1.0.7
* 'class' version 7.3.14
* 'party' version 1.0.25
* 'e1071' version 1.6.7
* 'randomForest' version 4.6.12
On Nov 6, 2017, at 9:34 PM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
I would ask specifically on the FSL list again as they are the primary support
for FIX.
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Monday, November 6, 2017 at 8:31 PM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thanks, Matt.
I am still getting the same problem. What version of R and package party are
you using or is recommended?
I checked also in the FSL list and this problem has been posted but not
solution was provided.
Thank you,
-L
On Nov 6, 2017, at 11:54 AM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
I’m not an expert in R, so I’m not sure. I think that it does some compiling
and other things on my machine, but perhaps if you don’t compile that is all
that is needed. You could test ICA+FIX again and see if the error is resolved.
Peace,
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Monday, November 6, 2017 at 10:51 AM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thanks again, Matt.
I went through required packages again as suggested, a common output in R is
the following (for all packages): as root,
"> install.packages("randomForest", dependencies=TRUE)
trying URL
'https://cran.cnr.berkeley.edu/bin/macosx/el-capitan/contrib/3.4/randomForest_4.6-12.tgz'
Content type 'application/x-gzip' length 176377 bytes (172 KB)
==
downloaded 172 KB
The downloaded binary packages are in
/tmp/RtmpP65gVF/downloaded_packages”
Should I go over each package to install it or this message includes
installation?
Thank you,
-L
On Nov 6, 2017, at 10:31 AM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
You could ask on the FSL list, but I think it would make sense to go through
the setup instructions again and make sure you aren’t missing any of the
required R packages.
Peace,
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Monday, November 6, 2017 at 9:29 AM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thank you, Matt. I found the only one and following error in
Results/RS_fMRI_2/RS_fMRI_2_hp2000.ica:
"Error in ctreefit(object = object, controls = controls, weights = weights, :
no slot of name "remove_weights" for this object of class "TreeGrowControl"
Calls: eval -> eval -> -> ctreefit -> .Call
Execution halted”
Any idea what should I do to fix this problem? I do not have R-devel installed,
is this required and/or related to this problem?
Thank you,
-L
On Nov 4, 2017, at 4:55 PM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
You will need to look into the logs more carefully (i.e. in subfolders of the
FIX folder) and you will likely find some issue with the R packages you have
installed.
Peace,
Matt.
From:
<hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>>
on behalf of Marta Moreno
<mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Saturday, November 4, 2017 at 3:28 PM
To: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: [HCP-Users] HCP_hp2000.RData
Dear experts,
I am getting the following error running hip_fix, my RSfMRI data is similar to
HCP data but I am getting the following error running hcp_fix
RS_fMRI_2/RS_fMRI_2.nii.gz 2000:
"FIX Classifying components in Melodic directory: RS_fMRI_2_hp2000.ica using
training file: /usr/local/fix1.065/training_files/H
Re: [HCP-Users] HCP_hp2000.RData
Thanks. I did and they helped.
The problem seams to be the required version for packages:
'kernlab' version 0.9.24
'ROCR' version 1.0.7
'class' version 7.3.14
'party' version 1.0.25
'e1071' version 1.6.7
'randomForest' version 4.6.12
> On Nov 6, 2017, at 9:34 PM, Glasser, Matthew <glass...@wustl.edu> wrote:
>
> I would ask specifically on the FSL list again as they are the primary
> support for FIX.
>
> Matt.
>
> From: Marta Moreno <mmorenoort...@icloud.com
> <mailto:mmorenoort...@icloud.com>>
> Date: Monday, November 6, 2017 at 8:31 PM
> To: Matt Glasser <glass...@wustl.edu <mailto:glass...@wustl.edu>>
> Cc: HCP Users <hcp-users@humanconnectome.org
> <mailto:hcp-users@humanconnectome.org>>
> Subject: Re: [HCP-Users] HCP_hp2000.RData
>
> Thanks, Matt.
>
> I am still getting the same problem. What version of R and package party are
> you using or is recommended?
> I checked also in the FSL list and this problem has been posted but not
> solution was provided.
>
> Thank you,
> -L
>
>> On Nov 6, 2017, at 11:54 AM, Glasser, Matthew <glass...@wustl.edu
>> <mailto:glass...@wustl.edu>> wrote:
>>
>> I’m not an expert in R, so I’m not sure. I think that it does some
>> compiling and other things on my machine, but perhaps if you don’t compile
>> that is all that is needed. You could test ICA+FIX again and see if the
>> error is resolved.
>>
>> Peace,
>>
>> Matt.
>>
>> From: Marta Moreno <mmorenoort...@icloud.com
>> <mailto:mmorenoort...@icloud.com>>
>> Date: Monday, November 6, 2017 at 10:51 AM
>> To: Matt Glasser <glass...@wustl.edu <mailto:glass...@wustl.edu>>
>> Cc: HCP Users <hcp-users@humanconnectome.org
>> <mailto:hcp-users@humanconnectome.org>>
>> Subject: Re: [HCP-Users] HCP_hp2000.RData
>>
>> Thanks again, Matt.
>>
>> I went through required packages again as suggested, a common output in R is
>> the following (for all packages): as root,
>> "> install.packages("randomForest", dependencies=TRUE)
>> trying URL
>> 'https://cran.cnr.berkeley.edu/bin/macosx/el-capitan/contrib/3.4/randomForest_4.6-12.tgz
>>
>> <https://cran.cnr.berkeley.edu/bin/macosx/el-capitan/contrib/3.4/randomForest_4.6-12.tgz>'
>> Content type 'application/x-gzip' length 176377 bytes (172 KB)
>> ==
>> downloaded 172 KB
>> The downloaded binary packages are in
>> /tmp/RtmpP65gVF/downloaded_packages”
>>
>> Should I go over each package to install it or this message includes
>> installation?
>>
>> Thank you,
>>
>> -L
>>
>>
>>> On Nov 6, 2017, at 10:31 AM, Glasser, Matthew <glass...@wustl.edu
>>> <mailto:glass...@wustl.edu>> wrote:
>>>
>>> You could ask on the FSL list, but I think it would make sense to go
>>> through the setup instructions again and make sure you aren’t missing any
>>> of the required R packages.
>>>
>>> Peace,
>>>
>>> Matt.
>>>
>>> From: Marta Moreno <mmorenoort...@icloud.com
>>> <mailto:mmorenoort...@icloud.com>>
>>> Date: Monday, November 6, 2017 at 9:29 AM
>>> To: Matt Glasser <glass...@wustl.edu <mailto:glass...@wustl.edu>>
>>> Cc: HCP Users <hcp-users@humanconnectome.org
>>> <mailto:hcp-users@humanconnectome.org>>
>>> Subject: Re: [HCP-Users] HCP_hp2000.RData
>>>
>>> Thank you, Matt. I found the only one and following error in
>>> Results/RS_fMRI_2/RS_fMRI_2_hp2000.ica:
>>>
>>> "Error in ctreefit(object = object, controls = controls, weights = weights,
>>> :
>>> no slot of name "remove_weights" for this object of class
>>> "TreeGrowControl"
>>> Calls: eval -> eval -> -> ctreefit -> .Call
>>> Execution halted”
>>>
>>> Any idea what should I do to fix this problem? I do not have R-devel
>>> installed, is this required and/or related to this problem?
>>>
>>> Thank you,
>>>
>>> -L
>>>
>>>
>>>
>>>
>>>
>>>> On Nov 4, 2017, at 4:55 PM, Glasser, Matthew <glass...@wustl.edu
>>>> <mailto:glass...@wustl.edu>> wrote:
>>>>
>>>> You will need to look into the logs more carefully (i.e. in subfolders of
>>>> the FIX folder) and you will likely find some issue with the
Re: [HCP-Users] HCP_hp2000.RData
I would ask specifically on the FSL list again as they are the primary support
for FIX.
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Monday, November 6, 2017 at 8:31 PM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thanks, Matt.
I am still getting the same problem. What version of R and package party are
you using or is recommended?
I checked also in the FSL list and this problem has been posted but not
solution was provided.
Thank you,
-L
On Nov 6, 2017, at 11:54 AM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
I’m not an expert in R, so I’m not sure. I think that it does some compiling
and other things on my machine, but perhaps if you don’t compile that is all
that is needed. You could test ICA+FIX again and see if the error is resolved.
Peace,
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Monday, November 6, 2017 at 10:51 AM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thanks again, Matt.
I went through required packages again as suggested, a common output in R is
the following (for all packages): as root,
"> install.packages("randomForest", dependencies=TRUE)
trying URL
'https://cran.cnr.berkeley.edu/bin/macosx/el-capitan/contrib/3.4/randomForest_4.6-12.tgz'
Content type 'application/x-gzip' length 176377 bytes (172 KB)
==
downloaded 172 KB
The downloaded binary packages are in
/tmp/RtmpP65gVF/downloaded_packages”
Should I go over each package to install it or this message includes
installation?
Thank you,
-L
On Nov 6, 2017, at 10:31 AM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
You could ask on the FSL list, but I think it would make sense to go through
the setup instructions again and make sure you aren’t missing any of the
required R packages.
Peace,
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Monday, November 6, 2017 at 9:29 AM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thank you, Matt. I found the only one and following error in
Results/RS_fMRI_2/RS_fMRI_2_hp2000.ica:
"Error in ctreefit(object = object, controls = controls, weights = weights, :
no slot of name "remove_weights" for this object of class "TreeGrowControl"
Calls: eval -> eval -> -> ctreefit -> .Call
Execution halted”
Any idea what should I do to fix this problem? I do not have R-devel installed,
is this required and/or related to this problem?
Thank you,
-L
On Nov 4, 2017, at 4:55 PM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
You will need to look into the logs more carefully (i.e. in subfolders of the
FIX folder) and you will likely find some issue with the R packages you have
installed.
Peace,
Matt.
From:
<hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>>
on behalf of Marta Moreno
<mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Saturday, November 4, 2017 at 3:28 PM
To: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: [HCP-Users] HCP_hp2000.RData
Dear experts,
I am getting the following error running hip_fix, my RSfMRI data is similar to
HCP data but I am getting the following error running hcp_fix
RS_fMRI_2/RS_fMRI_2.nii.gz 2000:
"FIX Classifying components in Melodic directory: RS_fMRI_2_hp2000.ica using
training file: /usr/local/fix1.065/training_files/HCP_hp2000.RData and
threshold 10
No valid labelling file specified"
I checked the settings and everything looks good. I do not see errors in
/.fix.log. Any idea what might be the problem?
Thank you,
-L
___
HCP-Users mailing list
HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org>
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
___
HCP-Users mailing list
HCP-Users@humanconnectome.org
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
Re: [HCP-Users] HCP_hp2000.RData
I’m not an expert in R, so I’m not sure. I think that it does some compiling
and other things on my machine, but perhaps if you don’t compile that is all
that is needed. You could test ICA+FIX again and see if the error is resolved.
Peace,
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Monday, November 6, 2017 at 10:51 AM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thanks again, Matt.
I went through required packages again as suggested, a common output in R is
the following (for all packages): as root,
"> install.packages("randomForest", dependencies=TRUE)
trying URL
'https://cran.cnr.berkeley.edu/bin/macosx/el-capitan/contrib/3.4/randomForest_4.6-12.tgz'
Content type 'application/x-gzip' length 176377 bytes (172 KB)
==
downloaded 172 KB
The downloaded binary packages are in
/tmp/RtmpP65gVF/downloaded_packages”
Should I go over each package to install it or this message includes
installation?
Thank you,
-L
On Nov 6, 2017, at 10:31 AM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
You could ask on the FSL list, but I think it would make sense to go through
the setup instructions again and make sure you aren’t missing any of the
required R packages.
Peace,
Matt.
From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Monday, November 6, 2017 at 9:29 AM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Cc: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] HCP_hp2000.RData
Thank you, Matt. I found the only one and following error in
Results/RS_fMRI_2/RS_fMRI_2_hp2000.ica:
"Error in ctreefit(object = object, controls = controls, weights = weights, :
no slot of name "remove_weights" for this object of class "TreeGrowControl"
Calls: eval -> eval -> -> ctreefit -> .Call
Execution halted”
Any idea what should I do to fix this problem? I do not have R-devel installed,
is this required and/or related to this problem?
Thank you,
-L
On Nov 4, 2017, at 4:55 PM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
You will need to look into the logs more carefully (i.e. in subfolders of the
FIX folder) and you will likely find some issue with the R packages you have
installed.
Peace,
Matt.
From:
<hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>>
on behalf of Marta Moreno
<mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>>
Date: Saturday, November 4, 2017 at 3:28 PM
To: HCP Users
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: [HCP-Users] HCP_hp2000.RData
Dear experts,
I am getting the following error running hip_fix, my RSfMRI data is similar to
HCP data but I am getting the following error running hcp_fix
RS_fMRI_2/RS_fMRI_2.nii.gz 2000:
"FIX Classifying components in Melodic directory: RS_fMRI_2_hp2000.ica using
training file: /usr/local/fix1.065/training_files/HCP_hp2000.RData and
threshold 10
No valid labelling file specified"
I checked the settings and everything looks good. I do not see errors in
/.fix.log. Any idea what might be the problem?
Thank you,
-L
___
HCP-Users mailing list
HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org>
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
___
HCP-Users mailing list
HCP-Users@humanconnectome.org
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
Re: [HCP-Users] HCP_hp2000.RData
Thanks again, Matt.
I went through required packages again as suggested, a common output in R is
the following (for all packages): as root,
"> install.packages("randomForest", dependencies=TRUE)
trying URL
'https://cran.cnr.berkeley.edu/bin/macosx/el-capitan/contrib/3.4/randomForest_4.6-12.tgz'
Content type 'application/x-gzip' length 176377 bytes (172 KB)
==
downloaded 172 KB
The downloaded binary packages are in
/tmp/RtmpP65gVF/downloaded_packages”
Should I go over each package to install it or this message includes
installation?
Thank you,
-L
> On Nov 6, 2017, at 10:31 AM, Glasser, Matthew <glass...@wustl.edu> wrote:
>
> You could ask on the FSL list, but I think it would make sense to go through
> the setup instructions again and make sure you aren’t missing any of the
> required R packages.
>
> Peace,
>
> Matt.
>
> From: Marta Moreno <mmorenoort...@icloud.com
> <mailto:mmorenoort...@icloud.com>>
> Date: Monday, November 6, 2017 at 9:29 AM
> To: Matt Glasser <glass...@wustl.edu <mailto:glass...@wustl.edu>>
> Cc: HCP Users <hcp-users@humanconnectome.org
> <mailto:hcp-users@humanconnectome.org>>
> Subject: Re: [HCP-Users] HCP_hp2000.RData
>
> Thank you, Matt. I found the only one and following error in
> Results/RS_fMRI_2/RS_fMRI_2_hp2000.ica:
>
> "Error in ctreefit(object = object, controls = controls, weights = weights,
> :
> no slot of name "remove_weights" for this object of class "TreeGrowControl"
> Calls: eval -> eval -> -> ctreefit -> .Call
> Execution halted”
>
> Any idea what should I do to fix this problem? I do not have R-devel
> installed, is this required and/or related to this problem?
>
> Thank you,
>
> -L
>
>
>
>
>
>> On Nov 4, 2017, at 4:55 PM, Glasser, Matthew <glass...@wustl.edu
>> <mailto:glass...@wustl.edu>> wrote:
>>
>> You will need to look into the logs more carefully (i.e. in subfolders of
>> the FIX folder) and you will likely find some issue with the R packages you
>> have installed.
>>
>> Peace,
>>
>> Matt.
>>
>> From: <hcp-users-boun...@humanconnectome.org
>> <mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Marta Moreno
>> <mmorenoort...@icloud.com <mailto:mmorenoort...@icloud.com>>
>> Date: Saturday, November 4, 2017 at 3:28 PM
>> To: HCP Users <hcp-users@humanconnectome.org
>> <mailto:hcp-users@humanconnectome.org>>
>> Subject: [HCP-Users] HCP_hp2000.RData
>>
>> Dear experts,
>>
>> I am getting the following error running hip_fix, my RSfMRI data is similar
>> to HCP data but I am getting the following error running hcp_fix
>> RS_fMRI_2/RS_fMRI_2.nii.gz 2000:
>>
>> "FIX Classifying components in Melodic directory: RS_fMRI_2_hp2000.ica using
>> training file: /usr/local/fix1.065/training_files/HCP_hp2000.RData and
>> threshold 10
>> No valid labelling file specified"
>>
>> I checked the settings and everything looks good. I do not see errors in
>> /.fix.log. Any idea what might be the problem?
>>
>> Thank you,
>>
>> -L
>>
>> ___
>> HCP-Users mailing list
>> HCP-Users@humanconnectome.org <mailto:HCP-Users@humanconnectome.org>
>> http://lists.humanconnectome.org/mailman/listinfo/hcp-users
>> <http://lists.humanconnectome.org/mailman/listinfo/hcp-users>
___
HCP-Users mailing list
HCP-Users@humanconnectome.org
http://lists.humanconnectome.org/mailman/listinfo/hcp-users
Re: [HCP-Users] HCP_hp2000.RData
You could ask on the FSL list, but I think it would make sense to go through the setup instructions again and make sure you aren’t missing any of the required R packages. Peace, Matt. From: Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>> Date: Monday, November 6, 2017 at 9:29 AM To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>> Cc: HCP Users <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: Re: [HCP-Users] HCP_hp2000.RData Thank you, Matt. I found the only one and following error in Results/RS_fMRI_2/RS_fMRI_2_hp2000.ica: "Error in ctreefit(object = object, controls = controls, weights = weights, : no slot of name "remove_weights" for this object of class "TreeGrowControl" Calls: eval -> eval -> -> ctreefit -> .Call Execution halted” Any idea what should I do to fix this problem? I do not have R-devel installed, is this required and/or related to this problem? Thank you, -L On Nov 4, 2017, at 4:55 PM, Glasser, Matthew <glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote: You will need to look into the logs more carefully (i.e. in subfolders of the FIX folder) and you will likely find some issue with the R packages you have installed. Peace, Matt. From: <hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Marta Moreno <mmorenoort...@icloud.com<mailto:mmorenoort...@icloud.com>> Date: Saturday, November 4, 2017 at 3:28 PM To: HCP Users <hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>> Subject: [HCP-Users] HCP_hp2000.RData Dear experts, I am getting the following error running hip_fix, my RSfMRI data is similar to HCP data but I am getting the following error running hcp_fix RS_fMRI_2/RS_fMRI_2.nii.gz 2000: "FIX Classifying components in Melodic directory: RS_fMRI_2_hp2000.ica using training file: /usr/local/fix1.065/training_files/HCP_hp2000.RData and threshold 10 No valid labelling file specified" I checked the settings and everything looks good. I do not see errors in /.fix.log. Any idea what might be the problem? Thank you, -L ___ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users ___ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
