Jaim wrote:
We are trying to color by temperature without success.
Is it implemented in Jmol 10pre12 ?
Hmmm ... looks like color temperature is not implemented.
It should be easy to implement, but I need some help with a few things.
Q: What is the range of values that the temperature field can have?
The RasMol doc says:
... High values are coloured in warmer (red) colours and lower values in
colder (blue) colours. This feature is often used to associate a scale
value [such as amino acid variability in viral mutants] with each atom in
a PDB file, and colour the molecule appropriately.
The difference between the temperature and charge colour schemes is that
increasing temperature values proceed from blue to red, whereas increasing
charge valuse go from red to blue.
Q: Do you think that the colors should be assigned based upon fixed
temperature values? Or upon relative values within the molecule?
Miguel
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