Re: [Jmol-users] rocketBarrels and arrows head
El 1 Jun 2010 a las 7:37, jaime.prilu...@weizmann.ac.il escribió: It seems that this only works on alpha helices, no effect on beta sheets. What Bob meant is that he could expand the existing command so that it affects beta sheets too. I have no opinion about whether this should be done or not. I think that somebody asked time ago for the ability to remove the arrows from the rocket cylinders. A similar issue may be raised regarding the use or absence of arrowheads in helical stretches of ribbons and/or cartoons -some programs put them in, some don't. -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] rocketBarrels and arrows head
If programs that remove the arrow heads from the helix cylinders also remove the heads from the sheet boxes, then Jmol should do that, too. What does Pymol do? 2010/6/1 Angel Herráez angel.herr...@uah.es El 1 Jun 2010 a las 7:37, jaime.prilu...@weizmann.ac.il escribió: It seems that this only works on alpha helices, no effect on beta sheets. What Bob meant is that he could expand the existing command so that it affects beta sheets too. I have no opinion about whether this should be done or not. I think that somebody asked time ago for the ability to remove the arrows from the rocket cylinders. A similar issue may be raised regarding the use or absence of arrowheads in helical stretches of ribbons and/or cartoons -some programs put them in, some don't. -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] rocketBarrels and arrows head
Hi Jaime 'set rocketBarrels' is working OK for me in 11.8.23, 11.8.24, 12.0.RC11 and 12.0.RC15 In general, is there an option to remove arrow heads? (beta sheets, ...) I don't think so. But I see no reason to be able to remove arrowheads from alpha rockets and not from beta rockets. Could be done together in my opinion. -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] rocketBarrels and arrows head
According to Angel Herráez angel.herr...@uah.es: 'set rocketBarrels' is working OK for me in 11.8.23, 11.8.24, 12.0.RC11 and 12.0.RC15 Thanks a lot. Will try again. Jaim -- Dr Jaime Prilusky | jaime.prilu...@weizmann.ac.il Head Bioinformatics| RD Bioinformatics and Data Management | Department of Biological Services | Weizmann Institute of Science | fax: 972-8-9344113 76100 Rehovot - Israel | tel: 972-8-9344959 OCA, http://oca.weizmann.ac.il (the protein structure/function database) Proteopedia, http://proteopedia.org (because life has more than 2D) -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] rocketBarrels and arrows head
I'm happy to remove arrow heads from the boxes with set rocketbarrels true Is it a common view to have no arrow heads at all? What does Pymol do? Bob On Mon, May 31, 2010 at 10:38 AM, jaime.prilu...@weizmann.ac.il wrote: According to Angel Herráez angel.herr...@uah.es: 'set rocketBarrels' is working OK for me in 11.8.23, 11.8.24, 12.0.RC11 and 12.0.RC15 Thanks a lot. Will try again. Jaim -- Dr Jaime Prilusky | jaime.prilu...@weizmann.ac.il Head Bioinformatics| RD Bioinformatics and Data Management | Department of Biological Services | Weizmann Institute of Science | fax: 972-8-9344113 76100 Rehovot - Israel | tel: 972-8-9344959 OCA, http://oca.weizmann.ac.il (the protein structure/function database) Proteopedia, http://proteopedia.org (because life has more than 2D) -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
Re: [Jmol-users] rocketBarrels and arrows head
According to Robert Hanson hans...@stolaf.edu: I'm happy to remove arrow heads from the boxes with set rocketbarrels true It seems that this only works on alpha helices, no effect on beta sheets. Jaim -- Dr Jaime Prilusky | jaime.prilu...@weizmann.ac.il Head Bioinformatics| RD Bioinformatics and Data Management | Department of Biological Services | Weizmann Institute of Science | fax: 972-8-9344113 76100 Rehovot - Israel | tel: 972-8-9344959 OCA, http://oca.weizmann.ac.il (the protein structure/function database) Proteopedia, http://proteopedia.org (because life has more than 2D) -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
[Jmol-users] rocketBarrels and arrows head
Hi, Is 'set rocketBarrels' working on jmol 11.8.24 ? In general, is there an option to remove arrow heads? (beta sheets, ...) Thanks in advance, Jaim -- Dr Jaime Prilusky | jaime.prilu...@weizmann.ac.il Head Bioinformatics| RD Bioinformatics and Data Management | Department of Biological Services | Weizmann Institute of Science | fax: 972-8-9344113 76100 Rehovot - Israel | tel: 972-8-9344959 OCA, http://oca.weizmann.ac.il (the protein structure/function database) Proteopedia, http://proteopedia.org (because life has more than 2D) -- ___ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
