Re: sudo port install tk -quartz problem (related with pymol)

2012-12-27 Thread Peng Yu
On Wed, Dec 26, 2012 at 8:30 PM, Ryan Schmidt ryandes...@macports.org wrote:

 On Dec 26, 2012, at 20:29, Peng Yu wrote:

 On Wed, Dec 26, 2012 at 8:26 PM, Ryan Schmidt wrote:

 On Dec 26, 2012, at 20:22, Peng Yu wrote:

 On Wed, Dec 26, 2012 at 7:22 PM, Ryan Schmidt wrote:

 Yeah that's weird... for the record I don't see this problem on my 
 system. So if you still see this problem after a rebuild, please attach a 
 log of the build to the ticket.

 What the path of the log file I'm suppose to post?

 The location of the logfile is printed by the command:

 port logfile tk

 I don't find it.

 ~$ port logfile tk
 Error: Log file not found for port in
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/x11/tk

 Explained in:

 https://trac.macports.org/ticket/37395#comment:7

I don't get what the solution is to this problem? (BTW, I have
attached the log file to the ticket system.)

-- 
Regards,
Peng
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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-27 Thread Ryan Schmidt

On Dec 27, 2012, at 22:55, Peng Yu pengyu...@gmail.com wrote:

 I don't get what the solution is to this problem? (BTW, I have
 attached the log file to the ticket system.)

You should be able to run

sudo port clean tk
sudo port selfupdate
sudo port upgrade tk

to receive the fixed version of tk.



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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-26 Thread Clemens Lang
Hi,

On Tue, Dec 25, 2012 at 11:26:17PM -0600, Peng Yu wrote:
 Could not open /opt/local/lib:/opt/local/lib/libtk8.6.dylib: Error
 opening or reading file (referenced from /opt/local/bin/wish8.6)
 DEBUG: Marking /opt/local/bin/wish8.6 as broken

what's the output of otool -L /opt/local/bin/wish8.6?

-- 
Clemens Lang

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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-26 Thread Peng Yu
On Wed, Dec 26, 2012 at 2:52 AM, Clemens Lang c...@macports.org wrote:
 Hi,

 On Tue, Dec 25, 2012 at 11:26:17PM -0600, Peng Yu wrote:
 Could not open /opt/local/lib:/opt/local/lib/libtk8.6.dylib: Error
 opening or reading file (referenced from /opt/local/bin/wish8.6)
 DEBUG: Marking /opt/local/bin/wish8.6 as broken

 what's the output of otool -L /opt/local/bin/wish8.6?

Here is the output.

$ otool -L /opt/local/bin/wish8.6
/opt/local/bin/wish8.6:
/opt/local/lib/libfontconfig.1.dylib (compatibility version 8.0.0,
current version 8.2.0)
/opt/local/lib:/opt/local/lib/libtk8.6.dylib (compatibility version
8.6.0, current version 8.6.0)
/opt/local/lib/libtcl8.6.dylib (compatibility version 8.6.0, current
version 8.6.0)
/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current
version 169.3.0)

/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
(compatibility version 150.0.0, current version 744.12.0)
/opt/local/lib/libXft.2.dylib (compatibility version 6.0.0, current
version 6.1.0)
/opt/local/lib/libX11.6.dylib (compatibility version 10.0.0, current
version 10.0.0)
/opt/local/lib/libXss.1.dylib (compatibility version 2.0.0, current
version 2.0.0)
/opt/local/lib/libXext.6.dylib (compatibility version 11.0.0, current
version 11.0.0)
/opt/local/lib/libz.1.dylib (compatibility version 1.0.0, current
version 1.2.7)


-- 
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Peng
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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-26 Thread Clemens Lang
On Wed, Dec 26, 2012 at 08:19:23AM -0600, Peng Yu wrote:
 $ otool -L /opt/local/bin/wish8.6
   /opt/local/lib:/opt/local/lib/libtk8.6.dylib (compatibility version 
 8.6.0, current version 8.6.0)

That's the problem. The part before (and including) the colon shouldn't
be there. This might be a bug in the port; please file a ticket.

-- 
Clemens Lang

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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-26 Thread Ryan Schmidt

On Dec 26, 2012, at 18:30, Clemens Lang c...@macports.org wrote:

 On Wed, Dec 26, 2012 at 08:19:23AM -0600, Peng Yu wrote:
 $ otool -L /opt/local/bin/wish8.6
  /opt/local/lib:/opt/local/lib/libtk8.6.dylib (compatibility version 
 8.6.0, current version 8.6.0)
 
 That's the problem. The part before (and including) the colon shouldn't
 be there. This might be a bug in the port; please file a ticket.

Yeah that's weird... for the record I don't see this problem on my system. So 
if you still see this problem after a rebuild, please attach a log of the build 
to the ticket.



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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-26 Thread Peng Yu
On Wed, Dec 26, 2012 at 7:22 PM, Ryan Schmidt ryandes...@macports.org wrote:

 On Dec 26, 2012, at 18:30, Clemens Lang c...@macports.org wrote:

 On Wed, Dec 26, 2012 at 08:19:23AM -0600, Peng Yu wrote:
 $ otool -L /opt/local/bin/wish8.6
  /opt/local/lib:/opt/local/lib/libtk8.6.dylib (compatibility version 
 8.6.0, current version 8.6.0)

 That's the problem. The part before (and including) the colon shouldn't
 be there. This might be a bug in the port; please file a ticket.

 Yeah that's weird... for the record I don't see this problem on my system. So 
 if you still see this problem after a rebuild, please attach a log of the 
 build to the ticket.

What the path of the log file I'm suppose to post?

-- 
Regards,
Peng
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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-26 Thread Ryan Schmidt

On Dec 26, 2012, at 20:22, Peng Yu wrote:

 On Wed, Dec 26, 2012 at 7:22 PM, Ryan Schmidt wrote:
 
 Yeah that's weird... for the record I don't see this problem on my system. 
 So if you still see this problem after a rebuild, please attach a log of the 
 build to the ticket.
 
 What the path of the log file I'm suppose to post?

The location of the logfile is printed by the command:

port logfile tk

Attach it to this ticket:

https://trac.macports.org/ticket/37395



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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-26 Thread Peng Yu
On Wed, Dec 26, 2012 at 8:26 PM, Ryan Schmidt ryandes...@macports.org wrote:

 On Dec 26, 2012, at 20:22, Peng Yu wrote:

 On Wed, Dec 26, 2012 at 7:22 PM, Ryan Schmidt wrote:

 Yeah that's weird... for the record I don't see this problem on my system. 
 So if you still see this problem after a rebuild, please attach a log of 
 the build to the ticket.

 What the path of the log file I'm suppose to post?

 The location of the logfile is printed by the command:

 port logfile tk

I don't find it.

~$ port logfile tk
Error: Log file not found for port in
/opt/local/var/macports/sources/rsync.macports.org/release/ports/x11/tk

 Attach it to this ticket:

 https://trac.macports.org/ticket/37395






-- 
Regards,
Peng
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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-26 Thread Ryan Schmidt

On Dec 26, 2012, at 20:29, Peng Yu wrote:

 On Wed, Dec 26, 2012 at 8:26 PM, Ryan Schmidt wrote:
 
 On Dec 26, 2012, at 20:22, Peng Yu wrote:
 
 On Wed, Dec 26, 2012 at 7:22 PM, Ryan Schmidt wrote:
 
 Yeah that's weird... for the record I don't see this problem on my system. 
 So if you still see this problem after a rebuild, please attach a log of 
 the build to the ticket.
 
 What the path of the log file I'm suppose to post?
 
 The location of the logfile is printed by the command:
 
 port logfile tk
 
 I don't find it.
 
 ~$ port logfile tk
 Error: Log file not found for port in
 /opt/local/var/macports/sources/rsync.macports.org/release/ports/x11/tk

Explained in:

https://trac.macports.org/ticket/37395#comment:7



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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-25 Thread Peng Yu
On Mon, Dec 24, 2012 at 10:04 PM, Clemens Lang c...@macports.org wrote:
 Hi,

 Quote: Please run port -d -y rev-upgrade and use the output to report a bug.

 Please post the output of the command mentioned.

Here are the output. Let me know if there is anything else that I shall provide.

DEBUG: skipping ppc in
/Applications/MacPorts/sshfs.app/Contents/Resources/sshnodelay.so
since this system can't run it anyway
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/bin/wineserver
DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/bin/wmc
DEBUG: Ignoring loadcommand containing @executable_path in /opt/local/bin/wrc
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/acledit.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/aclui.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/activeds.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/actxprxy.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/advapi32.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/advpack.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/amstream.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/apphelp.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/appwiz.cpl.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/aspnet_regiis.exe.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/atl.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/attrib.exe.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/authz.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/avicap32.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/avifil32.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/avifile.dll16.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/avrt.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/bcrypt.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/browseui.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cabarc.exe.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cabinet.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cacls.exe.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/capi2032.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cards.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cfgmgr32.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/clock.exe.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/clusapi.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cmd.exe.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/comcat.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/comctl32.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/comdlg32.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/comm.drv16.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/commdlg.dll16.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/compobj.dll16.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/compstui.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/control.exe.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/credui.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/crtdll.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/crypt32.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cryptdlg.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cryptdll.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cryptnet.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cryptui.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/cscript.exe.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/ctapi32.dll.so
DEBUG: Ignoring loadcommand containing @executable_path in
/opt/local/lib/wine/ctl3d.dll16.so
DEBUG: Ignoring 

Re: sudo port install tk -quartz problem (related with pymol)

2012-12-24 Thread Clemens Lang
Hi,

Quote: Please run port -d -y rev-upgrade and use the output to report a bug.

Please post the output of the command mentioned.
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Re: sudo port install tk -quartz problem (related with pymol)

2012-12-24 Thread Ryan Schmidt

On Dec 24, 2012, at 15:40, Peng Yu pengyu...@gmail.com wrote:

 ---  Found 1 broken file(s), matching files to ports
 Error: Port tk is still broken after rebuiling it more than 3 times.
 Error: Please run port -d -y rev-upgrade and use the output to report a bug.

Can we change it so that it exits here...

 Port tk still broken after rebuilding 3 time(s)
while executing
 error Port $portname still broken after rebuilding [expr
 $broken_port_counts($portname) - 1] time(s)
(procedure revupgrade_scanandrebuild line 256)
invoked from within
 revupgrade_scanandrebuild broken_port_counts $opts
(procedure macports::revupgrade line 5)
invoked from within
 macports::revupgrade $opts
(procedure action_revupgrade line 2)
invoked from within
 action_revupgrade $action $portlist $opts
(procedure action_target line 94)
invoked from within
 $action_proc $action $portlist [array get global_options]
(procedure process_cmd line 95)
invoked from within
 process_cmd $remaining_args
invoked from within
 if { [llength $remaining_args]  0 } {
 
# If there are remaining arguments, process those as a command
set exit_status [process_cmd $remaining...
(file /opt/local/bin/port line 4784)

...and all of this jumble is not printed? It's bound to just confuse users.


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