Re: [mart-dev] Gramene datasets, error 502
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 HTTP 502 = Bad Gateway usually means a proxying problem. Matteo Floris wrote: Dear developers, I get this error when I try to download 3 gramene datasets (I can download only Rice Polymorphism): Debug: http://www.gramene.org:80/Multi/martservice?type=configurationdataset=hsapiens_band_startvirtualschema=default Debug: OPENING CONNECTION Debug: CONNECTION OPENED Debug: EXCEPTION ON HTTPPOST: java.io.IOException: Server returned HTTP response code: 502 for URL: http://www.gramene.org:80/Multi/martservice?type=configurationdataset=hsapiens_band_startvirtualschema=default Do you have any suggestion? thanks in advance! Matteo Floris CRS4 Bioinformatics -BEGIN PGP SIGNATURE- Version: GnuPG v1.4.2.2 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org iD8DBQFGpKBs4C5LeMEKA/QRAtWYAJwKwpqVQ3M+KTJHv/ZkFsgQFvnZiQCdEh1k opkoe1+Gp/42YGPGG+TG56E= =Qsnh -END PGP SIGNATURE-
Re: [mart-dev] Gramene datasets, error 502
Hi Matteo Your request is incorrect. the configuration for the dataset you are requesting does'nt exist. when you do http://www.gramene.org/Multi/martservice?type=datasetsmart=ENSEMBL_MART_ENSEMBL you may see that 'hsapiens_band_start' is not listed, so you cant request its configuration :) Gramene experts would shed light on the matter if they have changed dataset names recently. cheers syed On Mon, 2007-07-23 at 14:22 +0200, Matteo Floris wrote: Dear developers, I get this error when I try to download 3 gramene datasets (I can download only Rice Polymorphism): Debug: http://www.gramene.org:80/Multi/martservice? type=configurationdataset=hsapiens_band_startvirtualschema=default Debug: OPENING CONNECTION Debug: CONNECTION OPENED Debug: EXCEPTION ON HTTPPOST: java.io.IOException: Server returned HTTP response code: 502 for URL: http://www.gramene.org:80/Multi/ martservice? type=configurationdataset=hsapiens_band_startvirtualschema=default Do you have any suggestion? thanks in advance! Matteo Floris CRS4 Bioinformatics -- == Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. ==
Re: [mart-dev] Gramene datasets, error 502
Well, thats Gramene configuration question, lets wait till a Gramene expert goes through this and explains this. Cheers syed On Mon, 2007-07-23 at 15:12 +0200, Matteo Floris wrote: Thanks Syed, the problem is that in xml file athaliana_gene_ensembl (that is present in the list of Gramene datasets) there is a pointer to hsapiens_band_start: FilterDescription internalName=hsapiens_band_start.band_start pointerDataset=hsapiens_band_start pointerFilter=band_start pointerInterface=default type=drop_down_basic_filter / but we cannot find hsapiens_band_start Thanks, Matteo. Hi Matteo Your request is incorrect. the configuration for the dataset you are requesting does'nt exist. when you do http://www.gramene.org/Multi/martservice? type=datasetsmart=ENSEMBL_MART_ENSEMBL you may see that 'hsapiens_band_start' is not listed, so you cant request its configuration :) Gramene experts would shed light on the matter if they have changed dataset names recently. cheers syed On Mon, 2007-07-23 at 14:22 +0200, Matteo Floris wrote: Dear developers, I get this error when I try to download 3 gramene datasets (I can download only Rice Polymorphism): Debug: http://www.gramene.org:80/Multi/martservice? type=configurationdataset=hsapiens_band_startvirtualschema=default Debug: OPENING CONNECTION Debug: CONNECTION OPENED Debug: EXCEPTION ON HTTPPOST: java.io.IOException: Server returned HTTP response code: 502 for URL: http://www.gramene.org:80/Multi/ martservice? type=configurationdataset=hsapiens_band_startvirtualschema=default Do you have any suggestion? thanks in advance! Matteo Floris CRS4 Bioinformatics -- == Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. == -- == Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. ==
Re: [mart-dev] Gramene datasets, error 502
Thanks Syed, the problem is that in xml file athaliana_gene_ensembl (that is present in the list of Gramene datasets) there is a pointer to hsapiens_band_start: FilterDescription internalName=hsapiens_band_start.band_start pointerDataset=hsapiens_band_start pointerFilter=band_start pointerInterface=default type=drop_down_basic_filter / but we cannot find hsapiens_band_start Thanks, Matteo. Hi Matteo Your request is incorrect. the configuration for the dataset you are requesting does'nt exist. when you do http://www.gramene.org/Multi/martservice? type=datasetsmart=ENSEMBL_MART_ENSEMBL you may see that 'hsapiens_band_start' is not listed, so you cant request its configuration :) Gramene experts would shed light on the matter if they have changed dataset names recently. cheers syed On Mon, 2007-07-23 at 14:22 +0200, Matteo Floris wrote: Dear developers, I get this error when I try to download 3 gramene datasets (I can download only Rice Polymorphism): Debug: http://www.gramene.org:80/Multi/martservice? type=configurationdataset=hsapiens_band_startvirtualschema=default Debug: OPENING CONNECTION Debug: CONNECTION OPENED Debug: EXCEPTION ON HTTPPOST: java.io.IOException: Server returned HTTP response code: 502 for URL: http://www.gramene.org:80/Multi/ martservice? type=configurationdataset=hsapiens_band_startvirtualschema=default Do you have any suggestion? thanks in advance! Matteo Floris CRS4 Bioinformatics -- == Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. ==
Re: [mart-dev] Gramene datasets, error 502
Hi Syed, Matteo, I have just fixed a problem with the server. Can you try again now and let me know if the issue persists? Thanks, Will On Mon, 23 Jul 2007, Syed Haider wrote: Well, thats Gramene configuration question, lets wait till a Gramene expert goes through this and explains this. Cheers syed On Mon, 2007-07-23 at 15:12 +0200, Matteo Floris wrote: Thanks Syed, the problem is that in xml file athaliana_gene_ensembl (that is present in the list of Gramene datasets) there is a pointer to hsapiens_band_start: FilterDescription internalName=hsapiens_band_start.band_start pointerDataset=hsapiens_band_start pointerFilter=band_start pointerInterface=default type=drop_down_basic_filter / but we cannot find hsapiens_band_start Thanks, Matteo. Hi Matteo Your request is incorrect. the configuration for the dataset you are requesting does'nt exist. when you do http://www.gramene.org/Multi/martservice? type=datasetsmart=ENSEMBL_MART_ENSEMBL you may see that 'hsapiens_band_start' is not listed, so you cant request its configuration :) Gramene experts would shed light on the matter if they have changed dataset names recently. cheers syed On Mon, 2007-07-23 at 14:22 +0200, Matteo Floris wrote: Dear developers, I get this error when I try to download 3 gramene datasets (I can download only Rice Polymorphism): Debug: http://www.gramene.org:80/Multi/martservice? type=configurationdataset=hsapiens_band_startvirtualschema=default Debug: OPENING CONNECTION Debug: CONNECTION OPENED Debug: EXCEPTION ON HTTPPOST: java.io.IOException: Server returned HTTP response code: 502 for URL: http://www.gramene.org:80/Multi/ martservice? type=configurationdataset=hsapiens_band_startvirtualschema=default Do you have any suggestion? thanks in advance! Matteo Floris CRS4 Bioinformatics -- == Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. == -- --- William Spooner WormMart Developer
Re: [mart-dev] Gramene datasets, error 502
Dear Will, the problem (proxy error) persists... It does not work :( Matteo. Hi Syed, Matteo, I have just fixed a problem with the server. Can you try again now and let me know if the issue persists? Thanks, Will On Mon, 23 Jul 2007, Syed Haider wrote: Well, thats Gramene configuration question, lets wait till a Gramene expert goes through this and explains this. Cheers syed On Mon, 2007-07-23 at 15:12 +0200, Matteo Floris wrote: Thanks Syed, the problem is that in xml file athaliana_gene_ensembl (that is present in the list of Gramene datasets) there is a pointer to hsapiens_band_start: FilterDescription internalName=hsapiens_band_start.band_start pointerDataset=hsapiens_band_start pointerFilter=band_start pointerInterface=default type=drop_down_basic_filter / but we cannot find hsapiens_band_start Thanks, Matteo. Hi Matteo Your request is incorrect. the configuration for the dataset you are requesting does'nt exist. when you do http://www.gramene.org/Multi/martservice? type=datasetsmart=ENSEMBL_MART_ENSEMBL you may see that 'hsapiens_band_start' is not listed, so you cant request its configuration :) Gramene experts would shed light on the matter if they have changed dataset names recently. cheers syed On Mon, 2007-07-23 at 14:22 +0200, Matteo Floris wrote: Dear developers, I get this error when I try to download 3 gramene datasets (I can download only Rice Polymorphism): Debug: http://www.gramene.org:80/Multi/martservice? type=configurationdataset=hsapiens_band_startvirtualschema=defau lt Debug: OPENING CONNECTION Debug: CONNECTION OPENED Debug: EXCEPTION ON HTTPPOST: java.io.IOException: Server returned HTTP response code: 502 for URL: http://www.gramene.org:80/Multi/ martservice? type=configurationdataset=hsapiens_band_startvirtualschema=defau lt Do you have any suggestion? thanks in advance! Matteo Floris CRS4 Bioinformatics -- == Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. == -- --- William Spooner WormMart Developer
