Re: [NMusers] How to format output table as purely comma-separated file

2019-03-20 Thread Devin Pastoor
data.table::fread should automatically detect the character separators and
parse it (lightning fast and parallelized i might add), so if using R, that
is a great swiss army knife that can read multihundred megabyte files
virtually instantly.

If that isn't working there is PKPDmisc::read_nonmem - I wrote that to
automatically detect the separator characters, trim spaces, convert to csv,
in cpp so quickly, then pass to read_csv under the hood. It also
automatically parses NSUB/table statements out for simulation replicate
files and works pretty well. It could be optimized more as I wrote it a
couple years ago but it is stable and on CRAN.

Devin

On Mon, Mar 18, 2019 at 10:45 PM Mark Tepeck  wrote:

> I vote for *FORMAT=CSV*, which reads super intuitive and handy.  I would
> even expect it to be the default although this change sounds crazy for the
> time being.
>
> Mark
>
> On Mon, Mar 18, 2019 at 8:50 PM Nick Holford 
> wrote:
>
>> Hi Bob,
>>
>> I agree with Sebastien. This would be a useful option and even better if
>> it was user friendly option like FORMAT=CSV which also converted from
>> scientific format to general format (Excel format names).
>>
>> Best wishes,
>>
>> Nick
>>
>>
>>
>> *From:* owner-nmus...@globomaxnm.com  *On
>> Behalf Of *Sebastien Bihorel
>> *Sent:* Tuesday, 19 March 2019 1:23 PM
>> *To:* Robert Bauer 
>> *Cc:* nmusers@globomaxnm.com
>> *Subject:* Re: [NMusers] How to format output table as purely
>> comma-separated file
>>
>>
>>
>> Hi,
>>
>>
>>
>> I think it would be a very useful option!
>>
>>
>>
>> Thanks
>>
>>
>> --
>>
>> *From: *"Robert Bauer" 
>> *To: *nmusers@globomaxnm.com
>> *Sent: *Monday, March 18, 2019 2:20:15 PM
>> *Subject: *RE: [NMusers] How to format output table as purely
>> comma-separated file
>>
>>
>>
>> Well, this is not a strange behavior, this is a standard FORTRAN
>> formatting process.
>>
>> Nonetheless, I can add a delimiter option that specifically removes
>> spaces for future releases of NONMEM.
>>
>>
>>
>>
>>
>> Robert J. Bauer, Ph.D.
>>
>> Senior Director
>>
>> Pharmacometrics R
>>
>> ICON Early Phase
>>
>> 820 W. Diamond Avenue
>>
>> Suite 100
>>
>> Gaithersburg, MD 20878
>>
>> Office: (215) 616-6428
>>
>> Mobile: (925) 286-0769
>>
>> robert.ba...@iconplc.com
>>
>> www.iconplc.com
>>
>>
>>
>> *From:* owner-nmus...@globomaxnm.com [mailto:owner-nmus...@globomaxnm.com
>> ] *On Behalf Of *Mark Tepeck
>> *Sent:* Saturday, March 16, 2019 10:33 AM
>> *To:* nmusers@globomaxnm.com
>> *Cc:* Sebastien Bihorel; Emmanuel Chigutsa; Paul Hutson
>> *Subject:* Re: [NMusers] How to format output table as purely
>> comma-separated file
>>
>>
>>
>> Hi,
>>
>>
>>
>> I am also wondering why NONMEM has this strange behavior. Is there any
>> possibility for the developer to fix that?  at least to provide an option
>> to exclude the space.
>>
>>
>>
>> Mark
>>
>>
>>
>> On Thu, Mar 14, 2019 at 6:31 PM Paul Hutson  wrote:
>>
>> Spaces as well, yes, but a simple click on the file opens nicely into
>> EXCEL without Data/Text Import. Thank you.
>>
>>
>>
>> Paul Hutson, PharmD, BCOP
>>
>> Professor
>>
>> UWisc School of Pharmacy
>>
>> T: 608.263.2496
>>
>> F: 608.265.5421
>>
>>
>>
>> *From:* owner-nmus...@globomaxnm.com  *On
>> Behalf Of *Sebastien Bihorel
>> *Sent:* Thursday, March 14, 2019 4:23 PM
>> *To:* Emmanuel Chigutsa 
>> *Cc:* nmusers@globomaxnm.com
>> *Subject:* Re: [NMusers] How to format output table as purely
>> comma-separated file
>>
>>
>>
>> Thanks for the input but I already tried that (or things along the line
>> of FORMAT=,1PE11.4). Commas are indeed in the table file... but so are
>> spaces.
>>
>>
>> --
>>
>> *From: *"Emmanuel Chigutsa" 
>> *To: *nmusers@globomaxnm.com, "Sebastien Bihorel" <
>> sebastien.biho...@cognigencorp.com>
>> *Sent: *Thursday, March 14, 2019 3:47:15 PM
>> *Subject: *Re: [NMusers] How to format output table as purely
>> comma-separated file
>>
>>
>>
>> Hi Sebastien,
>>
>>
>>
>> Try the following example code, with the rele

Re: [NMusers] How to format output table as purely comma-separated file

2019-03-18 Thread Mark Tepeck
I vote for *FORMAT=CSV*, which reads super intuitive and handy.  I would
even expect it to be the default although this change sounds crazy for the
time being.

Mark

On Mon, Mar 18, 2019 at 8:50 PM Nick Holford 
wrote:

> Hi Bob,
>
> I agree with Sebastien. This would be a useful option and even better if
> it was user friendly option like FORMAT=CSV which also converted from
> scientific format to general format (Excel format names).
>
> Best wishes,
>
> Nick
>
>
>
> *From:* owner-nmus...@globomaxnm.com  *On
> Behalf Of *Sebastien Bihorel
> *Sent:* Tuesday, 19 March 2019 1:23 PM
> *To:* Robert Bauer 
> *Cc:* nmusers@globomaxnm.com
> *Subject:* Re: [NMusers] How to format output table as purely
> comma-separated file
>
>
>
> Hi,
>
>
>
> I think it would be a very useful option!
>
>
>
> Thanks
>
>
> --
>
> *From: *"Robert Bauer" 
> *To: *nmusers@globomaxnm.com
> *Sent: *Monday, March 18, 2019 2:20:15 PM
> *Subject: *RE: [NMusers] How to format output table as purely
> comma-separated file
>
>
>
> Well, this is not a strange behavior, this is a standard FORTRAN
> formatting process.
>
> Nonetheless, I can add a delimiter option that specifically removes spaces
> for future releases of NONMEM.
>
>
>
>
>
> Robert J. Bauer, Ph.D.
>
> Senior Director
>
> Pharmacometrics R
>
> ICON Early Phase
>
> 820 W. Diamond Avenue
>
> Suite 100
>
> Gaithersburg, MD 20878
>
> Office: (215) 616-6428
>
> Mobile: (925) 286-0769
>
> robert.ba...@iconplc.com
>
> www.iconplc.com
>
>
>
> *From:* owner-nmus...@globomaxnm.com [mailto:owner-nmus...@globomaxnm.com
> ] *On Behalf Of *Mark Tepeck
> *Sent:* Saturday, March 16, 2019 10:33 AM
> *To:* nmusers@globomaxnm.com
> *Cc:* Sebastien Bihorel; Emmanuel Chigutsa; Paul Hutson
> *Subject:* Re: [NMusers] How to format output table as purely
> comma-separated file
>
>
>
> Hi,
>
>
>
> I am also wondering why NONMEM has this strange behavior. Is there any
> possibility for the developer to fix that?  at least to provide an option
> to exclude the space.
>
>
>
> Mark
>
>
>
> On Thu, Mar 14, 2019 at 6:31 PM Paul Hutson  wrote:
>
> Spaces as well, yes, but a simple click on the file opens nicely into
> EXCEL without Data/Text Import. Thank you.
>
>
>
> Paul Hutson, PharmD, BCOP
>
> Professor
>
> UWisc School of Pharmacy
>
> T: 608.263.2496
>
> F: 608.265.5421
>
>
>
> *From:* owner-nmus...@globomaxnm.com  *On
> Behalf Of *Sebastien Bihorel
> *Sent:* Thursday, March 14, 2019 4:23 PM
> *To:* Emmanuel Chigutsa 
> *Cc:* nmusers@globomaxnm.com
> *Subject:* Re: [NMusers] How to format output table as purely
> comma-separated file
>
>
>
> Thanks for the input but I already tried that (or things along the line of
> FORMAT=,1PE11.4). Commas are indeed in the table file... but so are spaces.
>
>
> --
>
> *From: *"Emmanuel Chigutsa" 
> *To: *nmusers@globomaxnm.com, "Sebastien Bihorel" <
> sebastien.biho...@cognigencorp.com>
> *Sent: *Thursday, March 14, 2019 3:47:15 PM
> *Subject: *Re: [NMusers] How to format output table as purely
> comma-separated file
>
>
>
> Hi Sebastien,
>
>
>
> Try the following example code, with the relevant pieces in red:
>
>
>
> $TABLE ID TIME CMT IPRED FORMAT=, FILE=mytab1.csv NOPRINT ONEHEADER
>
>
>
> Mannie
>
>
>
> On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel <
> sebastien.biho...@cognigencorp.com> wrote:
>
>
>
>
>
> Hi,
>
>
>
> I was wondering if there is a way to create "pure" csv file with $TABLE. I
> have tried various things with the FORMAT option but always ended up with
> spaces in between entries (in addition to the comma delimiters).
>
>
>
> Is there a proper fortran format one can use in $TABLE to make this happen?
>
>
>
> Thanks in advance
>
>
>
> Sebastien
>
>
>
>
>
>
>
> ICON plc made the following annotations.
> --
>
> This e-mail transmission may contain confidential or legally privileged
> information that is intended only for the individual or entity named in the
> e-mail address. If you are not the intended recipient, you are hereby
> notified that any disclosure, copying, distribution, or reliance upon the
> contents of this e-mail is strictly prohibited. If you have received this
> e-mail transmission in error, please reply to the sender, so that ICON plc
> can arrange for proper delivery, and then please delete the message.
>
> Thank You,
>
> ICON plc
> South County Business Park
> Leopardstown
> Dublin 18
> Ireland
> Registered number: 145835
>
>


RE: [NMusers] How to format output table as purely comma-separated file

2019-03-18 Thread Nick Holford
Hi Bob,
I agree with Sebastien. This would be a useful option and even better if it was 
user friendly option like FORMAT=CSV which also converted from scientific 
format to general format (Excel format names).
Best wishes,
Nick

From: owner-nmus...@globomaxnm.com  On Behalf Of 
Sebastien Bihorel
Sent: Tuesday, 19 March 2019 1:23 PM
To: Robert Bauer 
Cc: nmusers@globomaxnm.com
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Hi,

I think it would be a very useful option!

Thanks


From: "Robert Bauer" mailto:robert.ba...@iconplc.com>>
To: nmusers@globomaxnm.com<mailto:nmusers@globomaxnm.com>
Sent: Monday, March 18, 2019 2:20:15 PM
Subject: RE: [NMusers] How to format output table as purely comma-separated file

Well, this is not a strange behavior, this is a standard FORTRAN formatting 
process.
Nonetheless, I can add a delimiter option that specifically removes spaces for 
future releases of NONMEM.


Robert J. Bauer, Ph.D.
Senior Director
Pharmacometrics R
ICON Early Phase
820 W. Diamond Avenue
Suite 100
Gaithersburg, MD 20878
Office: (215) 616-6428
Mobile: (925) 286-0769
robert.ba...@iconplc.com<mailto:robert.ba...@iconplc.com>
www.iconplc.com<http://www.iconplc.com/>

From: owner-nmus...@globomaxnm.com<mailto:owner-nmus...@globomaxnm.com> 
[mailto:owner-nmus...@globomaxnm.com] On Behalf Of Mark Tepeck
Sent: Saturday, March 16, 2019 10:33 AM
To: nmusers@globomaxnm.com<mailto:nmusers@globomaxnm.com>
Cc: Sebastien Bihorel; Emmanuel Chigutsa; Paul Hutson
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Hi,

I am also wondering why NONMEM has this strange behavior. Is there any 
possibility for the developer to fix that?  at least to provide an option to 
exclude the space.

Mark

On Thu, Mar 14, 2019 at 6:31 PM Paul Hutson 
mailto:paul.hut...@wisc.edu>> wrote:
Spaces as well, yes, but a simple click on the file opens nicely into EXCEL 
without Data/Text Import. Thank you.

Paul Hutson, PharmD, BCOP
Professor
UWisc School of Pharmacy
T: 608.263.2496
F: 608.265.5421

From: owner-nmus...@globomaxnm.com<mailto:owner-nmus...@globomaxnm.com> 
mailto:owner-nmus...@globomaxnm.com>> On Behalf 
Of Sebastien Bihorel
Sent: Thursday, March 14, 2019 4:23 PM
To: Emmanuel Chigutsa mailto:echigu...@yahoo.com>>
Cc: nmusers@globomaxnm.com<mailto:nmusers@globomaxnm.com>
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Thanks for the input but I already tried that (or things along the line of 
FORMAT=,1PE11.4). Commas are indeed in the table file... but so are spaces.


From: "Emmanuel Chigutsa" mailto:echigu...@yahoo.com>>
To: nmusers@globomaxnm.com<mailto:nmusers@globomaxnm.com>, "Sebastien Bihorel" 
mailto:sebastien.biho...@cognigencorp.com>>
Sent: Thursday, March 14, 2019 3:47:15 PM
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Hi Sebastien,

Try the following example code, with the relevant pieces in red:

$TABLE ID TIME CMT IPRED FORMAT=, FILE=mytab1.csv NOPRINT ONEHEADER

Mannie

On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel 
mailto:sebastien.biho...@cognigencorp.com>> 
wrote:


Hi,

I was wondering if there is a way to create "pure" csv file with $TABLE. I have 
tried various things with the FORMAT option but always ended up with spaces in 
between entries (in addition to the comma delimiters).

Is there a proper fortran format one can use in $TABLE to make this happen?

Thanks in advance

Sebastien




ICON plc made the following annotations.
--
This e-mail transmission may contain confidential or legally privileged 
information that is intended only for the individual or entity named in the 
e-mail address. If you are not the intended recipient, you are hereby notified 
that any disclosure, copying, distribution, or reliance upon the contents of 
this e-mail is strictly prohibited. If you have received this e-mail 
transmission in error, please reply to the sender, so that ICON plc can arrange 
for proper delivery, and then please delete the message.

Thank You,

ICON plc
South County Business Park
Leopardstown
Dublin 18
Ireland
Registered number: 145835



Re: [NMusers] How to format output table as purely comma-separated file

2019-03-18 Thread Sebastien Bihorel
Hi, 

I think it would be a very useful option! 

Thanks 


From: "Robert Bauer"  
To: nmusers@globomaxnm.com 
Sent: Monday, March 18, 2019 2:20:15 PM 
Subject: RE: [NMusers] How to format output table as purely comma-separated 
file 



Well, this is not a strange behavior, this is a standard FORTRAN formatting 
process. 

Nonetheless, I can add a delimiter option that specifically removes spaces for 
future releases of NONMEM. 





Robert J. Bauer, Ph.D. 

Senior Director 

Pharmacometrics R 

ICON Early Phase 

820 W. Diamond Avenue 

Suite 100 

Gaithersburg, MD 20878 

Office: (215) 616-6428 

Mobile: (925) 286-0769 

[ mailto:robert.ba...@iconplc.com | robert.ba...@iconplc.com ] 


[ http://www.iconplc.com/ | www.iconplc.com ] 




From: owner-nmus...@globomaxnm.com [mailto:owner-nmus...@globomaxnm.com] On 
Behalf Of Mark Tepeck 
Sent: Saturday, March 16, 2019 10:33 AM 
To: nmusers@globomaxnm.com 
Cc: Sebastien Bihorel; Emmanuel Chigutsa; Paul Hutson 
Subject: Re: [NMusers] How to format output table as purely comma-separated 
file 




Hi, 





I am also wondering why NONMEM has this strange behavior. Is there any 
possibility for the developer to fix that? at least to provide an option to 
exclude the space. 





Mark 





On Thu, Mar 14, 2019 at 6:31 PM Paul Hutson < [ mailto:paul.hut...@wisc.edu | 
paul.hut...@wisc.edu ] > wrote: 





Spaces as well, yes, but a simple click on the file opens nicely into EXCEL 
without Data/Text Import. Thank you. 




Paul Hutson, PharmD, BCOP 

Professor 

UWisc School of Pharmacy 

T: 608.263.2496 

F: 608.265.5421 





From: [ mailto:owner-nmus...@globomaxnm.com | owner-nmus...@globomaxnm.com ] < 
[ mailto:owner-nmus...@globomaxnm.com | owner-nmus...@globomaxnm.com ] > On 
Behalf Of Sebastien Bihorel 
Sent: Thursday, March 14, 2019 4:23 PM 
To: Emmanuel Chigutsa < [ mailto:echigu...@yahoo.com | echigu...@yahoo.com ] > 
Cc: [ mailto:nmusers@globomaxnm.com | nmusers@globomaxnm.com ] 
Subject: Re: [NMusers] How to format output table as purely comma-separated 
file 





Thanks for the input but I already tried that (or things along the line of 
FORMAT=,1PE11.4). Commas are indeed in the table file... but so are spaces. 






From: "Emmanuel Chigutsa" < [ mailto:echigu...@yahoo.com | echigu...@yahoo.com 
] > 
To: [ mailto:nmusers@globomaxnm.com | nmusers@globomaxnm.com ] , "Sebastien 
Bihorel" < [ mailto:sebastien.biho...@cognigencorp.com | 
sebastien.biho...@cognigencorp.com ] > 
Sent: Thursday, March 14, 2019 3:47:15 PM 
Subject: Re: [NMusers] How to format output table as purely comma-separated 
file 





Hi Sebastien, 





Try the following example code, with the relevant pieces in red : 





$TABLE ID TIME CMT IPRED FORMAT=, FILE= mytab1.csv NOPRINT ONEHEADER 





Mannie 





On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel < [ 
mailto:sebastien.biho...@cognigencorp.com | sebastien.biho...@cognigencorp.com 
] > wrote: 








Hi, 





I was wondering if there is a way to create "pure" csv file with $TABLE. I have 
tried various things with the FORMAT option but always ended up with spaces in 
between entries (in addition to the comma delimiters). 





Is there a proper fortran format one can use in $TABLE to make this happen? 





Thanks in advance 





Sebastien 











ICON plc made the following annotations. 
-- 
This e-mail transmission may contain confidential or legally privileged 
information that is intended only for the individual or entity named in the 
e-mail address. If you are not the intended recipient, you are hereby notified 
that any disclosure, copying, distribution, or reliance upon the contents of 
this e-mail is strictly prohibited. If you have received this e-mail 
transmission in error, please reply to the sender, so that ICON plc can arrange 
for proper delivery, and then please delete the message. 

Thank You, 

ICON plc 
South County Business Park 
Leopardstown 
Dublin 18 
Ireland 
Registered number: 145835 




RE: [NMusers] How to format output table as purely comma-separated file

2019-03-18 Thread Bauer, Robert
Well, this is not a strange behavior, this is a standard FORTRAN formatting 
process.
Nonetheless, I can add a delimiter option that specifically removes spaces for 
future releases of NONMEM.


Robert J. Bauer, Ph.D.
Senior Director
Pharmacometrics R
ICON Early Phase
820 W. Diamond Avenue
Suite 100
Gaithersburg, MD 20878
Office: (215) 616-6428
Mobile: (925) 286-0769
robert.ba...@iconplc.com<mailto:robert.ba...@iconplc.com>
www.iconplc.com<http://www.iconplc.com/>

From: owner-nmus...@globomaxnm.com [mailto:owner-nmus...@globomaxnm.com] On 
Behalf Of Mark Tepeck
Sent: Saturday, March 16, 2019 10:33 AM
To: nmusers@globomaxnm.com
Cc: Sebastien Bihorel; Emmanuel Chigutsa; Paul Hutson
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Hi,

I am also wondering why NONMEM has this strange behavior. Is there any 
possibility for the developer to fix that?  at least to provide an option to 
exclude the space.

Mark

On Thu, Mar 14, 2019 at 6:31 PM Paul Hutson 
mailto:paul.hut...@wisc.edu>> wrote:
Spaces as well, yes, but a simple click on the file opens nicely into EXCEL 
without Data/Text Import. Thank you.

Paul Hutson, PharmD, BCOP
Professor
UWisc School of Pharmacy
T: 608.263.2496
F: 608.265.5421

From: owner-nmus...@globomaxnm.com<mailto:owner-nmus...@globomaxnm.com> 
mailto:owner-nmus...@globomaxnm.com>> On Behalf 
Of Sebastien Bihorel
Sent: Thursday, March 14, 2019 4:23 PM
To: Emmanuel Chigutsa mailto:echigu...@yahoo.com>>
Cc: nmusers@globomaxnm.com<mailto:nmusers@globomaxnm.com>
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Thanks for the input but I already tried that (or things along the line of 
FORMAT=,1PE11.4). Commas are indeed in the table file... but so are spaces.


From: "Emmanuel Chigutsa" mailto:echigu...@yahoo.com>>
To: nmusers@globomaxnm.com<mailto:nmusers@globomaxnm.com>, "Sebastien Bihorel" 
mailto:sebastien.biho...@cognigencorp.com>>
Sent: Thursday, March 14, 2019 3:47:15 PM
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Hi Sebastien,

Try the following example code, with the relevant pieces in red:

$TABLE ID TIME CMT IPRED FORMAT=, FILE=mytab1.csv NOPRINT ONEHEADER

Mannie

On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel 
mailto:sebastien.biho...@cognigencorp.com>> 
wrote:


Hi,

I was wondering if there is a way to create "pure" csv file with $TABLE. I have 
tried various things with the FORMAT option but always ended up with spaces in 
between entries (in addition to the comma delimiters).

Is there a proper fortran format one can use in $TABLE to make this happen?

Thanks in advance

Sebastien

ICON plc made the following annotations.
--
This e-mail transmission may contain confidential or legally privileged 
information that is intended only for the individual or entity named in the 
e-mail address. If you
are not the intended recipient, you are hereby notified that any disclosure, 
copying, distribution, or reliance upon the contents of this e-mail is strictly 
prohibited. If
you have received this e-mail transmission in error, please reply to the 
sender, so that ICON plc can arrange for proper delivery, and then please 
delete the message.

Thank You,

ICON plc
South County Business Park
Leopardstown
Dublin 18
Ireland
Registered number: 145835


Re: [NMusers] How to format output table as purely comma-separated file

2019-03-16 Thread Mark Tepeck
Hi,

I am also wondering why NONMEM has this strange behavior. Is there any
possibility for the developer to fix that?  at least to provide an option
to exclude the space.

Mark

On Thu, Mar 14, 2019 at 6:31 PM Paul Hutson  wrote:

> Spaces as well, yes, but a simple click on the file opens nicely into
> EXCEL without Data/Text Import. Thank you.
>
>
>
> Paul Hutson, PharmD, BCOP
>
> Professor
>
> UWisc School of Pharmacy
>
> T: 608.263.2496
>
> F: 608.265.5421
>
>
>
> *From:* owner-nmus...@globomaxnm.com  *On
> Behalf Of *Sebastien Bihorel
> *Sent:* Thursday, March 14, 2019 4:23 PM
> *To:* Emmanuel Chigutsa 
> *Cc:* nmusers@globomaxnm.com
> *Subject:* Re: [NMusers] How to format output table as purely
> comma-separated file
>
>
>
> Thanks for the input but I already tried that (or things along the line of
> FORMAT=,1PE11.4). Commas are indeed in the table file... but so are spaces.
>
>
> --
>
> *From: *"Emmanuel Chigutsa" 
> *To: *nmusers@globomaxnm.com, "Sebastien Bihorel" <
> sebastien.biho...@cognigencorp.com>
> *Sent: *Thursday, March 14, 2019 3:47:15 PM
> *Subject: *Re: [NMusers] How to format output table as purely
> comma-separated file
>
>
>
> Hi Sebastien,
>
>
>
> Try the following example code, with the relevant pieces in red:
>
>
>
> $TABLE ID TIME CMT IPRED FORMAT=, FILE=mytab1.csv NOPRINT ONEHEADER
>
>
>
> Mannie
>
>
>
> On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel <
> sebastien.biho...@cognigencorp.com> wrote:
>
>
>
>
>
> Hi,
>
>
>
> I was wondering if there is a way to create "pure" csv file with $TABLE. I
> have tried various things with the FORMAT option but always ended up with
> spaces in between entries (in addition to the comma delimiters).
>
>
>
> Is there a proper fortran format one can use in $TABLE to make this happen?
>
>
>
> Thanks in advance
>
>
>
> Sebastien
>
>
>
>
>


RE: [NMusers] How to format output table as purely comma-separated file

2019-03-14 Thread Paul Hutson
Spaces as well, yes, but a simple click on the file opens nicely into EXCEL 
without Data/Text Import. Thank you.

Paul Hutson, PharmD, BCOP
Professor
UWisc School of Pharmacy
T: 608.263.2496
F: 608.265.5421

From: owner-nmus...@globomaxnm.com  On Behalf Of 
Sebastien Bihorel
Sent: Thursday, March 14, 2019 4:23 PM
To: Emmanuel Chigutsa 
Cc: nmusers@globomaxnm.com
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Thanks for the input but I already tried that (or things along the line of 
FORMAT=,1PE11.4). Commas are indeed in the table file... but so are spaces.


From: "Emmanuel Chigutsa" mailto:echigu...@yahoo.com>>
To: nmusers@globomaxnm.com<mailto:nmusers@globomaxnm.com>, "Sebastien Bihorel" 
mailto:sebastien.biho...@cognigencorp.com>>
Sent: Thursday, March 14, 2019 3:47:15 PM
Subject: Re: [NMusers] How to format output table as purely comma-separated file

Hi Sebastien,

Try the following example code, with the relevant pieces in red:

$TABLE ID TIME CMT IPRED FORMAT=, FILE=mytab1.csv NOPRINT ONEHEADER

Mannie

On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel 
mailto:sebastien.biho...@cognigencorp.com>> 
wrote:


Hi,

I was wondering if there is a way to create "pure" csv file with $TABLE. I have 
tried various things with the FORMAT option but always ended up with spaces in 
between entries (in addition to the comma delimiters).

Is there a proper fortran format one can use in $TABLE to make this happen?

Thanks in advance

Sebastien




Re: [NMusers] How to format output table as purely comma-separated file

2019-03-14 Thread Sebastien Bihorel
Thanks for the input but I already tried that (or things along the line of 
FORMAT=,1PE11.4). Commas are indeed in the table file... but so are spaces. 


From: "Emmanuel Chigutsa"  
To: nmusers@globomaxnm.com, "Sebastien Bihorel" 
 
Sent: Thursday, March 14, 2019 3:47:15 PM 
Subject: Re: [NMusers] How to format output table as purely comma-separated 
file 

Hi Sebastien, 

Try the following example code, with the relevant pieces in red : 

$TABLE ID TIME CMT IPRED FORMAT=, FILE= mytab1.csv NOPRINT ONEHEADER 

Mannie 

On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel 
 wrote: 



Hi, 

I was wondering if there is a way to create "pure" csv file with $TABLE. I have 
tried various things with the FORMAT option but always ended up with spaces in 
between entries (in addition to the comma delimiters). 

Is there a proper fortran format one can use in $TABLE to make this happen? 

Thanks in advance 

Sebastien 




RE: [External] Re: [NMusers] How to format output table as purely comma-separated file

2019-03-14 Thread Singla, Sumeet K

Simba,

It still gives the same results. All the variables are in first column, rather 
than in different columns, separated by comma.

Regards,
Sumeet
From: Simbarashe Peter Zvada 
Sent: Thursday, March 14, 2019 3:34 PM
To: Singla, Sumeet K 
Cc: Emmanuel Chigutsa ; nmusers@globomaxnm.com; Sebastien 
Bihorel 
Subject: Re: [External] Re: [NMusers] How to format output table as purely 
comma-separated file

Hi Sumeet and Sebastian,

Following Mannie's suggestion, sometimes starting with the file works, may be 
not in all cases:

$TABLE  FILE=mytab1.csv  FORMAT=,  ID TIME CMT ... IPRED NOPRINT ONEHEADER

Thanks,
Simba

On Thu, Mar 14, 2019 at 4:21 PM Singla, Sumeet K 
mailto:sumeet-sin...@uiowa.edu>> wrote:
Emmanuel,

It didn’t work for me.

Regards,
Sumeet

From: owner-nmus...@globomaxnm.com<mailto:owner-nmus...@globomaxnm.com> 
mailto:owner-nmus...@globomaxnm.com>> On Behalf 
Of Emmanuel Chigutsa
Sent: Thursday, March 14, 2019 2:47 PM
To: nmusers@globomaxnm.com<mailto:nmusers@globomaxnm.com>; Sebastien Bihorel 
mailto:sebastien.biho...@cognigencorp.com>>
Subject: [External] Re: [NMusers] How to format output table as purely 
comma-separated file

Hi Sebastien,

Try the following example code, with the relevant pieces in red:

$TABLE ID TIME CMT IPRED FORMAT=, FILE=mytab1.csv NOPRINT ONEHEADER

Mannie

On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel 
mailto:sebastien.biho...@cognigencorp.com>> 
wrote:



Hi,

I was wondering if there is a way to create "pure" csv file with $TABLE. I have 
tried various things with the FORMAT option but always ended up with spaces in 
between entries (in addition to the comma delimiters).

Is there a proper fortran format one can use in $TABLE to make this happen?

Thanks in advance

Sebastien



--
e-mail: simba.zv...@gmail.com<mailto:mba.zv...@gmail.com>
mobile: +1-240-758-2758



Re: [External] Re: [NMusers] How to format output table as purely comma-separated file

2019-03-14 Thread Simbarashe Peter Zvada
Hi Sumeet and Sebastian,

Following Mannie's suggestion, sometimes starting with the file works, may
be not in all cases:

$TABLE  FILE=mytab1.csv  FORMAT=,  ID TIME CMT ... IPRED NOPRINT ONEHEADER

Thanks,
Simba

On Thu, Mar 14, 2019 at 4:21 PM Singla, Sumeet K 
wrote:

> Emmanuel,
>
>
>
> It didn’t work for me.
>
>
>
> Regards,
>
> Sumeet
>
>
>
> *From:* owner-nmus...@globomaxnm.com  *On
> Behalf Of *Emmanuel Chigutsa
> *Sent:* Thursday, March 14, 2019 2:47 PM
> *To:* nmusers@globomaxnm.com; Sebastien Bihorel <
> sebastien.biho...@cognigencorp.com>
> *Subject:* [External] Re: [NMusers] How to format output table as purely
> comma-separated file
>
>
>
> Hi Sebastien,
>
>
>
> Try the following example code, with the relevant pieces in red:
>
>
>
> $TABLE ID TIME CMT IPRED FORMAT=, FILE=mytab1.csv NOPRINT ONEHEADER
>
>
>
> Mannie
>
>
>
> On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel <
> sebastien.biho...@cognigencorp.com> wrote:
>
>
>
>
>
>
>
> Hi,
>
>
>
> I was wondering if there is a way to create "pure" csv file with $TABLE. I
> have tried various things with the FORMAT option but always ended up with
> spaces in between entries (in addition to the comma delimiters).
>
>
>
> Is there a proper fortran format one can use in $TABLE to make this happen?
>
>
>
> Thanks in advance
>
>
>
> Sebastien
>
>
>


-- 
e-mail: simba.zv...@gmail.com
mobile: +1-240-758-2758


Re: [NMusers] How to format output table as purely comma-separated file

2019-03-14 Thread Emmanuel Chigutsa
 Hi Sebastien,
Try the following example code, with the relevant pieces in red:
$TABLE ID TIME CMT IPRED FORMAT=, FILE=mytab1.csv NOPRINT ONEHEADER

Mannie
On Wednesday, March 13, 2019, 9:14:21 AM EDT, Sebastien Bihorel 
 wrote:  
 
 
Hi,

I was wondering if there is a way to create "pure" csv file with $TABLE. I have 
tried various things with the FORMAT option but always ended up with spaces in 
between entries (in addition to the comma delimiters).

Is there a proper fortran format one can use in $TABLE to make this happen?

Thanks in advance

Sebastien