[Paraview] How can someone insert an image to animation?

2009-01-14 Thread Andrey Merdeev
Hello everyone!

 

ParaView is very interesting program!

 

Two small questions: 

1. Is any possibility to format text or to insert some math symbols?

Like this: \epsilon or fm^3.

 

2. Is any possibility to change color legend extremely,

 for example, to do nonlinear fragmentation? 

 

How can someone insert an image to animation?

 

Thanks to community.

 

 

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Andrey Merdeev

 

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Re: [Paraview] Csv files and time series

2009-01-14 Thread Utkarsh Ayachit
Francois,

I've just committed a fix to the CVS head to make it possible to read
a file-series of CSV files so that one can animate through them.

Utkarsh

On Wed, Jan 14, 2009 at 5:29 AM, Francois Beaubert
francois.beaub...@univ-valenciennes.fr wrote:
 Hi all,

 I'm able to import some very simple csv file but can't animate them in time.
 Say for example that I have a serie of csv files like this:

 file_1.csv
 file_2.csv
 file_3.csv
 file_4.csv

 When I want to import them Paraview show them as a file series in the
 open-file panel, import is ok but I can't animate them.

 Is animation not supported for those csv files ?

 How can I convert them to vtk file format ?
 I know how to do this for 2d or 3D data set but not for simple 1D DATA ...
 don't find some good info on the last one

 Here is an example of one of my csv file where X is the spatial coordinate,
 C the concentration of a scalar and U the magnitude of a velocity

  X(m),C,U
  0.2000E+01, 0.6948E+01, 0.5703E+01
  0.2101E+01, 0.79500017E+01, 0.5802E+01
  0.2200E+01, 0.8948E+01, 0.5901E+01
  0.2300E+01, 0.9948E+01, 0.6000E+01
  0.2401E+01, 0.10950001E+01, 0.6099E+01
  0.2500E+01, 0.1200E+01, 0.6203E+01
  0.2601E+01, 0.11049998E+01, 0.6302E+01
  0.2700E+01, 0.1005E+01, 0.6401E+01
  0.2800E+01, 0.9052E+01, 0.6500E+01
  0.2901E+01, 0.8042E+01, 0.6599E+01
  0.3000E+01, 0.7052E+01, 0.6703E+01

 Thank you for reading
 Regards

 François


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Re: [Paraview] Add support for PARAVIEW_EXTRA_EXTERNAL_PLUGINS?

2009-01-14 Thread Michael Jackson
That is not is ParaView anymore? When did it go away? I use it all the  
time and recommend it to my first time users to compile their own  
filters. I would vote to keep the functionality if it is not causing  
problems for other parts of the build.


Why was it removed? Is it removed in CVS or 3.4?

---
Mike Jackson www.bluequartz.net


On Jan 14, 2009, at 8:46 AM, John Biddiscombe wrote:

There used to be a PARAVIEW_EXTRA_EXTERNAL_MODULES - which allowed  
you to compile modules into paraview - in fact it still exists, but  
probably nobody uses it any more since plugins have improved so much.


I have some users who want to compile paraview, and a couple of  
selected plugins, and then do a single make install


I've added PARAVIEW_EXTRA_EXTERNAL_PLUGINS to the main paraview  
cmake, which allows you to enter


vtkCSCSCommon;vtkCSCSFluent;vtkCSCSNetCDF etc etc etc

and then it prompts for paths to the sources, and compiles them at  
the same time as paraview itself.


Does anyone else need this functionality? Shall I add it to cvs?  
It's very simple - but does make life easier for the less  
experienced users (to manage one build instead of two).


JB

--
John Biddiscombe,email:biddisco @ cscs.ch
http://www.cscs.ch/
CSCS, Swiss National Supercomputing Centre  | Tel:  +41 (91) 610.82.07
Via Cantonale, 6928 Manno, Switzerland  | Fax:  +41 (91) 610.82.82


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Re: [Paraview] Add support for PARAVIEW_EXTRA_EXTERNAL_PLUGINS?

2009-01-14 Thread John Biddiscombe

Michael

Read again carefully and this time look for the in fact it still 
exists, but probably nobody uses it any more since plugins have improved 
so much - I actually use it myself, so I'm playing deveils advocate, 
but I like plugins better now...


JB

That is not is ParaView anymore? When did it go away? I use it all the 
time and recommend it to my first time users to compile their own 
filters. I would vote to keep the functionality if it is not causing 
problems for other parts of the build.


Why was it removed? Is it removed in CVS or 3.4?

---
Mike Jackson www.bluequartz.net


On Jan 14, 2009, at 8:46 AM, John Biddiscombe wrote:

There used to be a PARAVIEW_EXTRA_EXTERNAL_MODULES - which allowed 
you to compile modules into paraview - in fact it still exists, but 
probably nobody uses it any more since plugins have improved so much.


I have some users who want to compile paraview, and a couple of 
selected plugins, and then do a single make install


I've added PARAVIEW_EXTRA_EXTERNAL_PLUGINS to the main paraview 
cmake, which allows you to enter


vtkCSCSCommon;vtkCSCSFluent;vtkCSCSNetCDF etc etc etc

and then it prompts for paths to the sources, and compiles them at 
the same time as paraview itself.


Does anyone else need this functionality? Shall I add it to cvs? It's 
very simple - but does make life easier for the less experienced 
users (to manage one build instead of two).


JB

--
John Biddiscombe,email:biddisco @ cscs.ch
http://www.cscs.ch/
CSCS, Swiss National Supercomputing Centre  | Tel:  +41 (91) 610.82.07
Via Cantonale, 6928 Manno, Switzerland  | Fax:  +41 (91) 610.82.82


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CSCS, Swiss National Supercomputing Centre  | Tel:  +41 (91) 610.82.07
Via Cantonale, 6928 Manno, Switzerland  | Fax:  +41 (91) 610.82.82


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Re: [Paraview] Add support for PARAVIEW_EXTRA_EXTERNAL_PLUGINS?

2009-01-14 Thread Berk Geveci
 My point is that PARAVIEW_EXTRA_EXTERNAL_PLUGINS may be unnecessary and at
 some point may be obsolete.

PARAVIEW_EXTRA_EXTERNAL_MODULES is useful when deploying ParaView with
 extensions on a platform that does not support shared libraries (for
example Cray Xts and IBM Blue Genes).

-berk


On Wed, Jan 14, 2009 at 9:56 AM, Moreland, Kenneth kmo...@sandia.gov wrote:
 John,

 You should talk to Tim Shead.  As part of his OverView work, he is
 implementing a mechanism is ParaView in which you can define a set of
 plugins which you want loaded upon program startup.  The vision is that one
 day the ParaView application will really be an empty shell the defines its
 GUI and implementation by opening a set of predefined plugins.

 My point is that PARAVIEW_EXTRA_EXTERNAL_PLUGINS may be unnecessary and at
 some point may be obsolete.

 -Ken


 On 1/14/09 6:46 AM, John Biddiscombe biddi...@cscs.ch wrote:

 There used to be a PARAVIEW_EXTRA_EXTERNAL_MODULES - which allowed you
 to compile modules into paraview - in fact it still exists, but probably
 nobody uses it any more since plugins have improved so much.

 I have some users who want to compile paraview, and a couple of selected
 plugins, and then do a single make install

 I've added PARAVIEW_EXTRA_EXTERNAL_PLUGINS to the main paraview cmake,
 which allows you to enter

 vtkCSCSCommon;vtkCSCSFluent;vtkCSCSNetCDF etc etc etc

 and then it prompts for paths to the sources, and compiles them at the
 same time as paraview itself.

 Does anyone else need this functionality? Shall I add it to cvs? It's
 very simple - but does make life easier for the less experienced users
 (to manage one build instead of two).

 JB

 --
 John Biddiscombe,email:biddisco @ cscs.ch
 http://www.cscs.ch/
 CSCS, Swiss National Supercomputing Centre  | Tel:  +41 (91) 610.82.07
 Via Cantonale, 6928 Manno, Switzerland  | Fax:  +41 (91) 610.82.82


 ___
 ParaView mailing list
 ParaView@paraview.org
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  Kenneth Moreland
 ***  Sandia National Laboratories
 ***
 *** *** ***  email: kmo...@sandia.gov
 **  ***  **  phone: (505) 844-8919
 ***  web:   http://www.cs.unm.edu/~kmorel


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Re: [Paraview] time dependent mha

2009-01-14 Thread Berk Geveci
I don't think mha support time natively. I am cc'ing the vtk users
list in case I am wrong. Adding support for file series of mha files,
as long as the images are of the same dimensions, should be fairly
easy. Would that do the trick?

-berk

On Tue, Jan 13, 2009 at 8:07 PM, David Fuentes fuente...@gmail.com wrote:

 Is there a time dependent format for mha files ?
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Re: [Paraview] Add support for PARAVIEW_EXTRA_EXTERNAL_PLUGINS?

2009-01-14 Thread Moreland, Kenneth
Perhaps Tim's plugins should also have an option to compile in statically.  
There is a lot of interest in running infovis capabilities on these platforms.

-Ken


On 1/14/09 8:31 AM, Berk Geveci berk.gev...@kitware.com wrote:

 My point is that PARAVIEW_EXTRA_EXTERNAL_PLUGINS may be unnecessary and at
 some point may be obsolete.

PARAVIEW_EXTRA_EXTERNAL_MODULES is useful when deploying ParaView with
 extensions on a platform that does not support shared libraries (for
example Cray Xts and IBM Blue Genes).

-berk


On Wed, Jan 14, 2009 at 9:56 AM, Moreland, Kenneth kmo...@sandia.gov wrote:
 John,

 You should talk to Tim Shead.  As part of his OverView work, he is
 implementing a mechanism is ParaView in which you can define a set of
 plugins which you want loaded upon program startup.  The vision is that one
 day the ParaView application will really be an empty shell the defines its
 GUI and implementation by opening a set of predefined plugins.

 My point is that PARAVIEW_EXTRA_EXTERNAL_PLUGINS may be unnecessary and at
 some point may be obsolete.

 -Ken


 On 1/14/09 6:46 AM, John Biddiscombe biddi...@cscs.ch wrote:

 There used to be a PARAVIEW_EXTRA_EXTERNAL_MODULES - which allowed you
 to compile modules into paraview - in fact it still exists, but probably
 nobody uses it any more since plugins have improved so much.

 I have some users who want to compile paraview, and a couple of selected
 plugins, and then do a single make install

 I've added PARAVIEW_EXTRA_EXTERNAL_PLUGINS to the main paraview cmake,
 which allows you to enter

 vtkCSCSCommon;vtkCSCSFluent;vtkCSCSNetCDF etc etc etc

 and then it prompts for paths to the sources, and compiles them at the
 same time as paraview itself.

 Does anyone else need this functionality? Shall I add it to cvs? It's
 very simple - but does make life easier for the less experienced users
 (to manage one build instead of two).

 JB

 --
 John Biddiscombe,email:biddisco @ cscs.ch
 http://www.cscs.ch/
 CSCS, Swiss National Supercomputing Centre  | Tel:  +41 (91) 610.82.07
 Via Cantonale, 6928 Manno, Switzerland  | Fax:  +41 (91) 610.82.82


 ___
 ParaView mailing list
 ParaView@paraview.org
 http://www.paraview.org/mailman/listinfo/paraview




  Kenneth Moreland
 ***  Sandia National Laboratories
 ***
 *** *** ***  email: kmo...@sandia.gov
 **  ***  **  phone: (505) 844-8919
 ***  web:   http://www.cs.unm.edu/~kmorel


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     Kenneth Moreland
***  Sandia National Laboratories
***
*** *** ***  email: kmo...@sandia.gov
**  ***  **  phone: (505) 844-8919
***  web:   http://www.cs.unm.edu/~kmorel

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Re: [Paraview] Add support for PARAVIEW_EXTRA_EXTERNAL_PLUGINS?

2009-01-14 Thread Berk Geveci
If we come up with a standard way of doing this, it would make my life
easier when I am building binaries so I am all for someone doing it
:-)

On Wed, Jan 14, 2009 at 10:39 AM, John Biddiscombe biddi...@cscs.ch wrote:

 Perhaps Tim's plugins should also have an option to compile in statically.
  There is a lot of interest in running infovis capabilities on these
 platforms.

 To avoid confusion. I did not mean statically. I meant only that they are
 compiled in at paraview compile time, not as a second stage afterwards. They
 are still dynamic plugins.

 JB



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Re: [Paraview] Slicer along a track

2009-01-14 Thread Berk Geveci
To my knowledge, such filter does not exist. However, it would be
fairly easy to do this using the Programmable Filter.

-berk

On Wed, Jan 14, 2009 at 6:10 AM, Jérôme jerome.ve...@gmail.com wrote:
 Hi all,
 Is there in ParaView3 an image slicer that slices along a track ?
 Explanation: I have a vtkPolyData that contains one polyline. This
 vtkPolyData is embedded in a volume vtkImageData. I would like to get
 a slice of the volume at each polydata point, oriented by the tangent
 of the line.

 I think I would be able to write my own filter, but I wonder if there
 already exists a way for doing that, maybe by using correctly the
 paraview slicer?

 Thank you!

 Jerome
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Re: [Paraview] time dependent mha

2009-01-14 Thread David Fuentes


Hey berk,

yes, the data is the same dimension at each time instance.



df




On Wed, 14 Jan 2009, Berk Geveci wrote:


I don't think mha support time natively. I am cc'ing the vtk users
list in case I am wrong. Adding support for file series of mha files,
as long as the images are of the same dimensions, should be fairly
easy. Would that do the trick?

-berk

On Tue, Jan 13, 2009 at 8:07 PM, David Fuentes fuente...@gmail.com wrote:


Is there a time dependent format for mha files ?
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Re: [Paraview] Add support for PARAVIEW_EXTRA_EXTERNAL_PLUGINS?

2009-01-14 Thread Michael Jackson
I sooo missed the subtle difference between  
PARAVIEW_EXTRA_EXTERNAL_MODULES and PARAVIEW_EXTRA_EXTERNAL_PLUGINS.  
My eyes just saw what they wanted to see and the brain didn't process  
it correctly.



So how does this mechanism work? Do I still need to have a  
*ParaViewImport.cmake file in my EXTERNAL_MODULE? Currently most of my  
EXTERNAL_MODULES are compiled into the vtkPVFilters library, what is  
the difference between setting my Module as a  
PARAVIEW_EXTRA_EXTERNAL_MODULES vs PARAVIEW_EXTRA_EXTERNAL_PLUGINS?



---
Mike Jackson www.bluequartz.net



On Jan 14, 2009, at 10:41 AM, John Biddiscombe wrote:



PARAVIEW_EXTRA_EXTERNAL_MODULES is useful when deploying ParaView  
with

extensions on a platform that does not support shared libraries (for
example Cray Xts and IBM Blue Genes).



And also to clarify. I did not intend to remove the  
PARAVIEW_EXTRA_EXTERNAL_MODULES, only to add  
PARAVIEW_EXTRA_EXTERNAL_PLUGINS


JB


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Re: [Paraview] Add support for PARAVIEW_EXTRA_EXTERNAL_PLUGINS?

2009-01-14 Thread Michael Jackson
Awesome. I have the same issues with keeping 2 CMake files for each  
plugin. This eliminates that need and is less work for me. I vote keep  
it/put it in.


Thanks for the excellent explanation.
_
Mike Jackson  mike.jack...@bluequartz.net
BlueQuartz Softwarewww.bluequartz.net
Principal Software Engineer  Dayton, Ohio



On Jan 14, 2009, at 11:04 AM, John Biddiscombe wrote:


Mike
what is the difference between setting my Module as a  
PARAVIEW_EXTRA_EXTERNAL_MODULES vs PARAVIEW_EXTRA_EXTERNAL_PLUGINS?


EXTERNAL_MODULES : the source files are added to the target for  
pvfilters. They might be static or dynamic, depending on how your  
build is configured. The code is compiled into pvfilters, the core  
of paraview.
CMake picks up the file 'NAME'ParaViewImport.cmake and uses it for  
the sources


EXTERNAL_PLUGINS : when BUILD_SHARED_LIBS is ON the source directory  
for each plugin is supplied and the MACRO add_paraview_plugin is  
called for each plugin listed passing the source directory in. The  
CmakeLists.txt file in the directory is used, just as if you were  
compiling the plugin separately. The plugin is added as a separate  
target to the paraview build, and appears just like all those  
overview/prism plugins that are gradually appearing in the build.


I develop custom plugins for several institutions (each one has  
different plugins), and each time I compile paraview for them, I  
then compile the plugins they need afterwards. Each time, they ask,  
why can't you just compile the plugins at the same time as  
paraview. Well now I can. I could have used the EXTERNAL_MODULES  
feature as well, but as you have seen from emails on this list,  
there are Fluent, netCDF, OpenDX, blah vlah blah modules out there  
and many other people weant to use them too and expect to be able to  
compile the as plugins, not as internal modules. Plugins are in  
general easier to manage and I don't want to maintain multiple  
cmakelists files


Currently I have 3 setf for each module, and maintaining them is a  
pain.

1) compile as a vtk filter, (use cmakelists.txt)
2) compile as a plugin (use pv3-plugin/cmakelists.txt)
3) compiles as external_module into paraview (use  
'NAME'ParaViewImport.cmake)


too much work.
3) is no longer required by me.
2) is nice because changing a plugin is a quicker make than changing  
paraview source
2) also allows me to use my new external_plugins to compile at pv- 
compile time just like I used to with 3)


I hope this thread is finished now.

JB






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Re: [Paraview] Paraview multiple display

2009-01-14 Thread Biao She
Thanks for your reply Ken.
I am not trying to implement a camera link with property links. I just use
it as an example. The point I was trying to make is how to synchronize the
properties of two views.
The relationship between my two follow-up questions is that if there is a
way to synchronize property links, I can use CameraViewUp and CameraRotation
(my second question) property links to link cameras with a constant offset.
Sorry for the confusions and Thanks again.

Aaron


On Wed, Jan 14, 2009 at 7:00 AM, Moreland, Kenneth kmo...@sandia.govwrote:

  Your two follow-up questions seem to have nothing to do with the original
 question.  For the initial question, no there is no way to link cameras with
 a constant offset.  I don't have any good ideas how to do it, but I would
 recommend getting the one of ParaView's stereo modes to work.

 As for the follow-up questions:

 1. There is some specialness with the camera link that causes the renders
 to be synchronized along with the camera parameters.  I know of no easy way
 to do the same thing with property links (perhaps someone else knows some
 magic).  I'm not sure why you want to.  What is the point of implementing a
 camera link with property links?

 2. There is no CameraRotation property.  I'll try not to spark a debate on
 why that is; suffice it to say that the underlying vtkCamera has no such
 support.

 -Ken



 On 1/13/09 5:58 PM, Biao She sheb...@gmail.com wrote:

 Hi Paraviewers.
 I guess that I didn't make my question clear in my last email. Here comes
 two specific questions:
  1. I have tried camera link and property link separately to do my job. If
 I use camera link to link the camears in two views, after I rotate the
 camera in one view, the other camera will update itself automatically (The
 two views are exactly the same at all time). However, if I use property
 link, the other camera won't update itself unless I click on its view area
 (It needs focus to update). For property link, I only link two properties:
 CameraPosition and CameraViewUp. Is there a way that I can make the
 other camera update itself automatically?
 2. I can't find any CameraRotation property, is there a way to link the
 rotation matrix of camera in different views? That means, the two different
 cameras in the two different views will multiply the same rotation matrix
 after a rotation.
 Thanks very much for your time!

 Aaron

 On Tue, Jan 13, 2009 at 10:51 AM, Biao She sheb...@gmail.com wrote:

 Hi everyone.
 I am trying to use paraview for side by side stereo display. I understand
 that I can link cameras between two display areas. The problem is that I
 don't know how to set a constant offset (like the distance between two eyes)
 of camera position for two linked cameras.  Dose anybody have any idea?
 Thanks very much!

 Aaron





  Kenneth Moreland
 ***  Sandia National Laboratories
 ***
 *** *** ***  email: kmo...@sandia.gov
 **  ***  **  phone: (505) 844-8919
 ***  web:   
 http://www.cs.unm.edu/~kmorelhttp://www.cs.unm.edu/%7Ekmorel


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[Paraview] GUIToolbar in python? or XML to python

2009-01-14 Thread Jorge Mario Mazo
Hi there is there a way to create a GUIToolbar icon in python

or is there to write a XML view, that trows the data parameters to a
python script, instead of c++ classes,
pretty much like the helix.xml plugin example.

btw how can I hide the

  !-- the script --
 StringVectorProperty
name=Script
command=SetScript
number_of_elements=1
default_values=import math;#xa;pdo =
self.GetPolyDataOutput()#xa;#xa;newPts = vtk.vtkPoints()#xa;for i
in range(0, numPts):#xa;   x = i*float(length)/float(numPts)#xa;   y
= math.sin(i*rounds*2*math.pi/numPts)#xa;   z =
math.cos(i*rounds*2*math.pi/numPts)#xa;   newPts.InsertPoint(i,
x,y,z)#xa;#xa;pdo.SetPoints(newPts)#xa;aPolyLine =
vtk.vtkPolyLine()#xa;#xa;aPolyLine.GetPointIds().SetNumberOfIds(numPts)#xa;for
i in range(0,numPts):#xa;   aPolyLine.GetPointIds().SetId(i,
i)#xa;#xa;pdo.Allocate(1,
1)#xa;pdo.InsertNextCell(aPolyLine.GetCellType(),
aPolyLine.GetPointIds())#xa;
   Hints
 Widget type=multi_line/
   /Hints
 /StringVectorProperty


from the helix source plugin!!!


thanks in advance
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[Paraview] how to control paraview from python

2009-01-14 Thread Jorge Mario Mazo
Hi there

I have a python script that does a lot of stuff to some vrml files, it
works perfect if its ran from the paraview python shell,
but when I run it from outside paraview, the script runs, but it does
not visualizes anything. I dont how to tell python to use the
open paraview.
I also tried to create a server pvserver, connect my script to that
server and then I opened paraview and connected it to that server

but I keep getting

The startup command failed to start ... check your PATH and file permissions

what should my PATH have?

thanks in advance
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