Re: [PyMOL] trouble selecting residues with mouse
I also have such a problem (on Linux). Couldn't find any solution though. On 2/8/07, Heidi Privett priv...@caltech.edu wrote: I have been trying to run the latest version of MacPyMOL on my new iMac with an Intel Core 2 Duo processor and the latest version of OSX. I have noticed problems trying to select residues with my mouse (either control-clicking to select or double clicking to get the menu). I can select some residues normally, but for others, when I control-click on them, a residue in another part of the protein gets selected. Still other residues cannot be selected at all using the mouse. This also happens with I try to pick atoms with the mouse. I've seen this happen with multiple PDB files and older versions of MacPyMOL as well.I don't have any problems selecting residues or atoms with the command line. This problem seems to be similar to the one that someone was having with the X11 version a couple of weeks ago. Does anyone have any suggestions? Thanks. Heidi ~~ Heidi K. Privett Graduate Student Division of Chemistry and Chemical Engineering California Institute of Technology 1200 E. California Blvd. MC 114-96 Pasadena, CA 91125 USA priv...@caltech.edu - Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly with pre-integrated technology to make your job easier. Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo http://sel.as-us.falkag.net/sel?cmd=lnkkid=120709bid=263057dat=121642 ___ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users
[PyMOL] reload modified wizard
Hello, I develop several custom PyMol wizards. Is there any way to reload a modified wizard, without restarting PyMol? Thank you.
Re: [PyMOL] trouble selecting residues with mouse
This problem is usually caused by running out of colors used to encode atoms during interactive selection -- that can happen when the display is in 16-bit (thousands of colors) as opposed to 24/32-bit (millions of colors). Please double-check the Display settings in System Preferences. -Original Message- From: pymol-users-boun...@lists.sourceforge.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of bgbg bg Sent: Saturday, February 24, 2007 2:23 AM To: Heidi Privett Cc: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] trouble selecting residues with mouse I also have such a problem (on Linux). Couldn't find any solution though. On 2/8/07, Heidi Privett priv...@caltech.edu wrote: I have been trying to run the latest version of MacPyMOL on my new iMac with an Intel Core 2 Duo processor and the latest version of OSX. I have noticed problems trying to select residues with my mouse (either control-clicking to select or double clicking to get the menu). I can select some residues normally, but for others, when I control-click on them, a residue in another part of the protein gets selected. Still other residues cannot be selected at all using the mouse. This also happens with I try to pick atoms with the mouse. I've seen this happen with multiple PDB files and older versions of MacPyMOL as well.I don't have any problems selecting residues or atoms with the command line. This problem seems to be similar to the one that someone was having with the X11 version a couple of weeks ago. Does anyone have any suggestions? Thanks. Heidi ~~ Heidi K. Privett Graduate Student Division of Chemistry and Chemical Engineering California Institute of Technology 1200 E. California Blvd. MC 114-96 Pasadena, CA 91125 USA priv...@caltech.edu -- --- Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly with pre-integrated technology to make your job easier. Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo http://sel.as-us.falkag.net/sel?cmd=lnkkid=120709bid=263057dat=1216 42 ___ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users -- --- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT business topics through brief surveys-and earn cash http://www.techsay.com/default.php?page=join.phpp=sourceforge CID=DEVDEV ___ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users
Re: [PyMOL] reload modified wizard
Actually, I did this when I was developing the APBS Plugin. I put all of the interesting code in a module called _apbs_tools. apbs_tools was just a little wrapper where the init function would import and reload _apbs_tools and then call through to it. -Michael On 2/24/07, DeLano Scientific del...@delsci.info wrote: I believe this is a limitation of Python: once a code module is loaded and initialized, it is difficult to reload it...you might be able to hack it though. -Original Message- From: pymol-users-boun...@lists.sourceforge.net [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of bgbg bg Sent: Saturday, February 24, 2007 5:19 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] reload modified wizard Hello, I develop several custom PyMol wizards. Is there any way to reload a modified wizard, without restarting PyMol? Thank you. -- --- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT business topics through brief surveys-and earn cash http://www.techsay.com/default.php?page=join.phpp=sourceforge CID=DEVDEV ___ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users - Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT business topics through brief surveys-and earn cash http://www.techsay.com/default.php?page=join.phpp=sourceforgeCID=DEVDEV ___ PyMOL-users mailing list PyMOL-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/pymol-users -- Biophysics Graduate Student Carlson Lab, University of Michigan http://www.umich.edu/~mlerner http://lernerclan.net
