Re: [PyMOL] Changing Bfactors
Hi Ramakrishna, On Jan 12, 2008 3:51 PM, rama krishna ram...@gmail.com wrote: Dear User, I need to color the Molecule based on generalized order parameter after running the script data2bfactor i used the command data2b_res 'mol','datafile' after that it shows that IOError: [Errno 2] No such file or directory: 'datafile' i would like to know whether i need to specify path of input file or i need to place it in specified folder. Why don't you try? Note that you can also change the working directory within pymol... (cd) Tsjerk -- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623
Re: [PyMOL] Changing Bfactors
On Sat, 12 Jan 2008 20:21:37 +0530, rama krishna ram...@gmail.com wrote: Dear User, I need to color the Molecule based on generalized order parameter after running the script data2bfactor i used the command data2b_res 'mol','datafile' after that it shows that IOError: [Errno 2] No such file or directory: 'datafile' i would like to know whether i need to specify path of input file or i need to place it in specified folder. I prepared the input file like this 1 MET 0.2 . so on kindly suggest me where its going wrong Perhaps the instructions on my web page were misleading. Don't put quotes around the name of the mol or datafile. I.e. if you have a real object named my_protein and a data file called interesting_info.dat, then the command would be: data2b_res my_protein, interesting_info.dat Cheers, Rob -- Robert L. Campbell, Ph.D. Senior Research Associate/Adjunct Assistant Professor Botterell Hall Rm 644 Department of Biochemistry, Queen's University, Kingston, ON K7L 3N6 Canada Tel: 613-533-6821Fax: 613-533-2497 robert.campb...@queensu.cahttp://pldserver1.biochem.queensu.ca/~rlc
[PyMOL] Changing Bfactors
Dear User, I need to color the Molecule based on generalized order parameter after running the script data2bfactor i used the command data2b_res 'mol','datafile' after that it shows that IOError: [Errno 2] No such file or directory: 'datafile' i would like to know whether i need to specify path of input file or i need to place it in specified folder. I prepared the input file like this 1 MET 0.2 . so on kindly suggest me where its going wrong Ramakrishna
