Re: [Qgis-user] Where is R in QGIS Sextante
Yes, no problem, but my script is for working in RStudio, I don't know how to do it in R SEXTANTE or ManageR. ## library(adehabitatHR) the data set is called mam head(mam) Especie X.coord Y.coord 1Canis familiaris 322988.0 1212817 2 Caluromys derbianus 325730.6 1203590 3 Mamifero sp 321659.7 1216665 4 Mamifero sp 322918.3 1213156 5Didelphis sp 323609.1 1211597 6 Mamifero sp 325512.2 1203657 # con adehabitatHR xy - c(mam$X.coord, mam$Y.coord) xyspm - matrix(xy, ncol=2) xyspm xysp - SpatialPoints(xyspm) plot(xysp, pch = 16, col = red) ud - kernelUD(xysp) ud image(ud) # Estimating the home range from the UD homerange - getverticeshr(ud) class(homerange) plot(homerange, col = red) vud - getvolumeUD(ud) vud image(vud) contour(vud) 2012/11/20 simbamangu simbamangu+os...@gmail.com Could you share the code here or as a page on the QGIS wiki how-tos http://hub.qgis.org/wiki/quantum-gis/Users_Corner#HowTos ? -- View this message in context: http://osgeo-org.1560.n6.nabble.com/Where-is-R-in-QGIS-Sextante-tp5016411p5017669.html Sent from the Quantum GIS - User mailing list archive at Nabble.com. ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user -- *Manuel Spínola, Ph.D.* Instituto Internacional en Conservación y Manejo de Vida Silvestre Universidad Nacional Apartado 1350-3000 Heredia COSTA RICA mspin...@una.ac.cr mspinol...@gmail.com Teléfono: (506) 2277-3598 Fax: (506) 2237-7036 Personal website: Lobito de río https://sites.google.com/site/lobitoderio/ Institutional website: ICOMVIS http://www.icomvis.una.ac.cr/ ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
Re: [Qgis-user] Where is R in QGIS Sextante
Hi R Sextante imports data via readogr () and writes them with (library rgdal). So your function has to accept an input created by readogr() and to export it as an ouput that writeogr() can write. After you've done that it's easy to put in Sextante. The instructions made by Victor are quite clear but I can help if necessary. Regards On Fri, Nov 23, 2012 at 4:28 PM, Manuel Spínola mspinol...@gmail.comwrote: Yes, no problem, but my script is for working in RStudio, I don't know how to do it in R SEXTANTE or ManageR. ## library(adehabitatHR) the data set is called mam head(mam) Especie X.coord Y.coord 1Canis familiaris 322988.0 1212817 2 Caluromys derbianus 325730.6 1203590 3 Mamifero sp 321659.7 1216665 4 Mamifero sp 322918.3 1213156 5Didelphis sp 323609.1 1211597 6 Mamifero sp 325512.2 1203657 # con adehabitatHR xy - c(mam$X.coord, mam$Y.coord) xyspm - matrix(xy, ncol=2) xyspm xysp - SpatialPoints(xyspm) plot(xysp, pch = 16, col = red) ud - kernelUD(xysp) ud image(ud) # Estimating the home range from the UD homerange - getverticeshr(ud) class(homerange) plot(homerange, col = red) vud - getvolumeUD(ud) vud image(vud) contour(vud) 2012/11/20 simbamangu simbamangu+os...@gmail.com Could you share the code here or as a page on the QGIS wiki how-tos http://hub.qgis.org/wiki/quantum-gis/Users_Corner#HowTos ? -- View this message in context: http://osgeo-org.1560.n6.nabble.com/Where-is-R-in-QGIS-Sextante-tp5016411p5017669.html Sent from the Quantum GIS - User mailing list archive at Nabble.com. ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user -- *Manuel Spínola, Ph.D.* Instituto Internacional en Conservación y Manejo de Vida Silvestre Universidad Nacional Apartado 1350-3000 Heredia COSTA RICA mspin...@una.ac.cr mspinol...@gmail.com Teléfono: (506) 2277-3598 Fax: (506) 2237-7036 Personal website: Lobito de ríohttps://sites.google.com/site/lobitoderio/ Institutional website: ICOMVIS http://www.icomvis.una.ac.cr/ ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
Re: [Qgis-user] Where is R in QGIS Sextante
Could you share the code here or as a page on the QGIS wiki how-tos http://hub.qgis.org/wiki/quantum-gis/Users_Corner#HowTos ? -- View this message in context: http://osgeo-org.1560.n6.nabble.com/Where-is-R-in-QGIS-Sextante-tp5016411p5017669.html Sent from the Quantum GIS - User mailing list archive at Nabble.com. ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
Re: [Qgis-user] Where is R in QGIS Sextante
Il 16/11/2012 18:41, Manuel Spínola ha scritto: Thank you very much Werner. I wrote a very simple script to do a kernel (through adehabitatHR), how can I Hi Manuel, would you mind sharing it? Thanks. -- Paolo Cavallini - Faunalia www.faunalia.eu Full contact details at www.faunalia.eu/pc Nuovi corsi QGIS e PostGIS: http://www.faunalia.it/calendario ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
Re: [Qgis-user] Where is R in QGIS Sextante
Thank you very much Werner. I wrote a very simple script to do a kernel (through adehabitatHR), how can I excecute the code? Best, Manuel 2012/11/15 Werner Macho werner.ma...@gmail.com On 15/11/12 16:52, Manuel Spínola wrote: Thank you very much Gene. I remember there was an R icon on the Sextante menu, but I cannot see it right now. I have R installed in my computer. In this link it shows a screenshot where you can see R within the SEXTANTE menu. Hi! You have to go to Analysis - SEXTANTE Options and configuration - R scripts - Activate .. Then you should have R available again .. HTH kind regards Werner ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user -- *Manuel Spínola, Ph.D.* Instituto Internacional en Conservación y Manejo de Vida Silvestre Universidad Nacional Apartado 1350-3000 Heredia COSTA RICA mspin...@una.ac.cr mspinol...@gmail.com Teléfono: (506) 2277-3598 Fax: (506) 2237-7036 Personal website: Lobito de río https://sites.google.com/site/lobitoderio/ Institutional website: ICOMVIS http://www.icomvis.una.ac.cr/ ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
Re: [Qgis-user] Where is R in QGIS Sextante
Thank you very much Gene. I remember there was an R icon on the Sextante menu, but I cannot see it right now. I have R installed in my computer. In this link it shows a screenshot where you can see R within the SEXTANTE menu. http://press.underdiverwaterman.com/qgis-with-r-working-with-the-sextante-plugin/ Best, Manuel 2012/11/15 gene martin.lal...@gmail.com R has nothing to do with Sextante which only use it. You must install it (see http://hub.qgis.org/issues/6029 http://hub.qgis.org/issues/6029 ) -- View this message in context: http://osgeo-org.1560.n6.nabble.com/Where-is-R-in-QGIS-Sextante-tp5016411p5016478.html Sent from the Quantum GIS - User mailing list archive at Nabble.com. ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user -- *Manuel Spínola, Ph.D.* Instituto Internacional en Conservación y Manejo de Vida Silvestre Universidad Nacional Apartado 1350-3000 Heredia COSTA RICA mspin...@una.ac.cr mspinol...@gmail.com Teléfono: (506) 2277-3598 Fax: (506) 2237-7036 Personal website: Lobito de río https://sites.google.com/site/lobitoderio/ Institutional website: ICOMVIS http://www.icomvis.una.ac.cr/ ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
Re: [Qgis-user] Where is R in QGIS Sextante
On 15/11/12 16:52, Manuel Spínola wrote: Thank you very much Gene. I remember there was an R icon on the Sextante menu, but I cannot see it right now. I have R installed in my computer. In this link it shows a screenshot where you can see R within the SEXTANTE menu. Hi! You have to go to Analysis - SEXTANTE Options and configuration - R scripts - Activate .. Then you should have R available again .. HTH kind regards Werner ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
Re: [Qgis-user] Where is R in QGIS Sextante
Con mucho gusto ya sabes 2012/11/15 Manuel Spínola mspinol...@gmail.com Thank you very much Gene. I remember there was an R icon on the Sextante menu, but I cannot see it right now. I have R installed in my computer. In this link it shows a screenshot where you can see R within the SEXTANTE menu. http://press.underdiverwaterman.com/qgis-with-r-working-with-the-sextante-plugin/ Best, Manuel 2012/11/15 gene martin.lal...@gmail.com R has nothing to do with Sextante which only use it. You must install it (see http://hub.qgis.org/issues/6029 http://hub.qgis.org/issues/6029 ) -- View this message in context: http://osgeo-org.1560.n6.nabble.com/Where-is-R-in-QGIS-Sextante-tp5016411p5016478.html Sent from the Quantum GIS - User mailing list archive at Nabble.com. ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user -- *Manuel Spínola, Ph.D.* Instituto Internacional en Conservación y Manejo de Vida Silvestre Universidad Nacional Apartado 1350-3000 Heredia COSTA RICA mspin...@una.ac.cr mspinol...@gmail.com Teléfono: (506) 2277-3598 Fax: (506) 2237-7036 Personal website: Lobito de ríohttps://sites.google.com/site/lobitoderio/ Institutional website: ICOMVIS http://www.icomvis.una.ac.cr/ ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
[Qgis-user] Where is R in QGIS Sextante
Dear list members, Where is R in QGIS Sextante? I am using MAC iOS lion and QGIS 1.8.0 Best, Manuel -- *Manuel Spínola, Ph.D.* Instituto Internacional en Conservación y Manejo de Vida Silvestre Universidad Nacional Apartado 1350-3000 Heredia COSTA RICA mspin...@una.ac.cr mspinol...@gmail.com Teléfono: (506) 2277-3598 Fax: (506) 2237-7036 Personal website: Lobito de río https://sites.google.com/site/lobitoderio/ Institutional website: ICOMVIS http://www.icomvis.una.ac.cr/ ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
Re: [Qgis-user] Where is R in QGIS Sextante
R has nothing to do with Sextante which only use it. You must install it (see http://hub.qgis.org/issues/6029 http://hub.qgis.org/issues/6029 ) -- View this message in context: http://osgeo-org.1560.n6.nabble.com/Where-is-R-in-QGIS-Sextante-tp5016411p5016478.html Sent from the Quantum GIS - User mailing list archive at Nabble.com. ___ Qgis-user mailing list Qgis-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/qgis-user
