Re: [R] Newbie wants to compare 2 huge RDSs row by row.
Hi Henrik, Thanks for pointing out the diffobj package and the clear example. Nice! On Sun, Jan 28, 2018 at 6:22 PM, Marsh Hardy ARA/RISK <mha...@ara.com> wrote: > Thanks, I think I've found the most succinct expression of differences in > two data.frames... > > length(which( rowSums( x1 != x2 ) > 0)) > > gives a count of the # of records in two data.frames that do not match. > > // > > From: Henrik Bengtsson [henrik.bengts...@gmail.com] > Sent: Sunday, January 28, 2018 11:12 AM > To: Ulrik Stervbo > Cc: Marsh Hardy ARA/RISK; r-help@r-project.org > Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. > > The diffobj package (https://cran.r-project.org/package=diffobj) is > really helpful here. It provides "diff" functions diffPrint(), > diffStr(), and diffChr() to compare two object 'x' and 'y' and provide > neat colorized summary output. > > Example: > > > iris2 <- iris > > iris2[122:125,4] <- iris2[122:125,4] + 0.1 > > > diffobj::diffPrint(iris2, iris) > < iris2 > > iris > @@ 121,8 / 121,8 @@ > ~ Sepal.Length Sepal.Width Petal.Length Petal.WidthSpecies > 120 6.0 2.2 5.0 1.5 virginica > 121 6.9 3.2 5.7 2.3 virginica > < 122 5.6 2.8 4.9 2.1 virginica > > 122 5.6 2.8 4.9 2.0 virginica > < 123 7.7 2.8 6.7 2.1 virginica > > 123 7.7 2.8 6.7 2.0 virginica > < 124 6.3 2.7 4.9 1.9 virginica > > 124 6.3 2.7 4.9 1.8 virginica > < 125 6.7 3.3 5.7 2.2 virginica > > 125 6.7 3.3 5.7 2.1 virginica > 126 7.2 3.2 6.0 1.8 virginica > 127 6.2 2.8 4.8 1.8 virginica > > What's not show here is that the colored output (supported by many > terminals these days) also highlights exactly which elements in those > rows differ. > > /Henrik > > On Sun, Jan 28, 2018 at 12:17 AM, Ulrik Stervbo <ulrik.ster...@gmail.com> > wrote: > > The anti_join from the package dplyr might also be handy. > > > > install.package("dplyr") > > library(dplyr) > > anti_join (x1, x2) > > > > You can get help on the different functions by ?function.name(), so > > ?anti_join() will bring you help - and examples - on the anti_join > > function. > > > > It might be worth testing your approach on a small subset of the data. > That > > makes it easier for you to follow what happens and evaluate the outcome. > > > > HTH > > Ulrik > > > > Marsh Hardy ARA/RISK <mha...@ara.com> schrieb am So., 28. Jan. 2018, > 04:14: > > > >> Cool, looks like that'd do it, almost as if converting an entire record > to > >> a character string and comparing strings. > >> > >> > >> From: William Dunlap [wdun...@tibco.com] > >> Sent: Saturday, January 27, 2018 4:57 PM > >> To: Marsh Hardy ARA/RISK > >> Cc: Ulrik Stervbo; Eric Berger; r-help@r-project.org > >> Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. > >> > >> If your two objects have class "data.frame" (look at class(objectName)) > >> and they > >> both have the same number of columns and the same order of columns and > the > >> column types match closely enough (use all.equal(x1, x2) for that), then > >> you can try > >> which( rowSums( x1 != x2 ) > 0) > >> E.g., > >> > x1 <- data.frame(X=1:5, Y=rep(c("A","B"),c(3,2))) > >> > x2 <- data.frame(X=c(1,2,-3,-4,5), Y=rep(c("A","B"),c(2,3))) > >> > x1 > >> X Y > >> 1 1 A > >> 2 2 A > >> 3 3 A > >> 4 4 B > >> 5 5 B > >> > x2 > >>X Y > >> 1 1 A > >> 2 2 A > >> 3 -3 B > >> 4 -4 B > >> 5 5 B > >> > which( rowSums( x1 != x2 ) > 0) > >> [1] 3 4 > >> > >> If you want to allow small numeric differences but exactly character > >> matches > >> you will have to get a bit fancier. Splitting the data.frames into > >> character and > >> numeric parts and comparing each works well. > >> > >> Bill Dunlap > >> TIBCO Software >
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
Thanks, I think I've found the most succinct expression of differences in two data.frames... length(which( rowSums( x1 != x2 ) > 0)) gives a count of the # of records in two data.frames that do not match. // From: Henrik Bengtsson [henrik.bengts...@gmail.com] Sent: Sunday, January 28, 2018 11:12 AM To: Ulrik Stervbo Cc: Marsh Hardy ARA/RISK; r-help@r-project.org Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. The diffobj package (https://cran.r-project.org/package=diffobj) is really helpful here. It provides "diff" functions diffPrint(), diffStr(), and diffChr() to compare two object 'x' and 'y' and provide neat colorized summary output. Example: > iris2 <- iris > iris2[122:125,4] <- iris2[122:125,4] + 0.1 > diffobj::diffPrint(iris2, iris) < iris2 > iris @@ 121,8 / 121,8 @@ ~ Sepal.Length Sepal.Width Petal.Length Petal.WidthSpecies 120 6.0 2.2 5.0 1.5 virginica 121 6.9 3.2 5.7 2.3 virginica < 122 5.6 2.8 4.9 2.1 virginica > 122 5.6 2.8 4.9 2.0 virginica < 123 7.7 2.8 6.7 2.1 virginica > 123 7.7 2.8 6.7 2.0 virginica < 124 6.3 2.7 4.9 1.9 virginica > 124 6.3 2.7 4.9 1.8 virginica < 125 6.7 3.3 5.7 2.2 virginica > 125 6.7 3.3 5.7 2.1 virginica 126 7.2 3.2 6.0 1.8 virginica 127 6.2 2.8 4.8 1.8 virginica What's not show here is that the colored output (supported by many terminals these days) also highlights exactly which elements in those rows differ. /Henrik On Sun, Jan 28, 2018 at 12:17 AM, Ulrik Stervbo <ulrik.ster...@gmail.com> wrote: > The anti_join from the package dplyr might also be handy. > > install.package("dplyr") > library(dplyr) > anti_join (x1, x2) > > You can get help on the different functions by ?function.name(), so > ?anti_join() will bring you help - and examples - on the anti_join > function. > > It might be worth testing your approach on a small subset of the data. That > makes it easier for you to follow what happens and evaluate the outcome. > > HTH > Ulrik > > Marsh Hardy ARA/RISK <mha...@ara.com> schrieb am So., 28. Jan. 2018, 04:14: > >> Cool, looks like that'd do it, almost as if converting an entire record to >> a character string and comparing strings. >> >> >> From: William Dunlap [wdun...@tibco.com] >> Sent: Saturday, January 27, 2018 4:57 PM >> To: Marsh Hardy ARA/RISK >> Cc: Ulrik Stervbo; Eric Berger; r-help@r-project.org >> Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. >> >> If your two objects have class "data.frame" (look at class(objectName)) >> and they >> both have the same number of columns and the same order of columns and the >> column types match closely enough (use all.equal(x1, x2) for that), then >> you can try >> which( rowSums( x1 != x2 ) > 0) >> E.g., >> > x1 <- data.frame(X=1:5, Y=rep(c("A","B"),c(3,2))) >> > x2 <- data.frame(X=c(1,2,-3,-4,5), Y=rep(c("A","B"),c(2,3))) >> > x1 >> X Y >> 1 1 A >> 2 2 A >> 3 3 A >> 4 4 B >> 5 5 B >> > x2 >>X Y >> 1 1 A >> 2 2 A >> 3 -3 B >> 4 -4 B >> 5 5 B >> > which( rowSums( x1 != x2 ) > 0) >> [1] 3 4 >> >> If you want to allow small numeric differences but exactly character >> matches >> you will have to get a bit fancier. Splitting the data.frames into >> character and >> numeric parts and comparing each works well. >> >> Bill Dunlap >> TIBCO Software >> wdunlap tibco.com<http://tibco.com> >> >> On Sat, Jan 27, 2018 at 1:18 PM, Marsh Hardy ARA/RISK <mha...@ara.com >> <mailto:mha...@ara.com>> wrote: >> Hi Guys, I apologize for my rank & utter newness at R. >> >> I used summary() and found about 95 variables, both character and numeric, >> all with "Length:368842" I assume is the # of records. >> >> I'd like to know the record number (row #?) of any record where the data >> doesn't match in the 2 files of what should be the same output. >> >> Thanks in advance, M. >> >> // >> >> From: Ulrik Stervbo [ulrik.ster...@
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
The diffobj package (https://cran.r-project.org/package=diffobj) is really helpful here. It provides "diff" functions diffPrint(), diffStr(), and diffChr() to compare two object 'x' and 'y' and provide neat colorized summary output. Example: > iris2 <- iris > iris2[122:125,4] <- iris2[122:125,4] + 0.1 > diffobj::diffPrint(iris2, iris) < iris2 > iris @@ 121,8 / 121,8 @@ ~ Sepal.Length Sepal.Width Petal.Length Petal.WidthSpecies 120 6.0 2.2 5.0 1.5 virginica 121 6.9 3.2 5.7 2.3 virginica < 122 5.6 2.8 4.9 2.1 virginica > 122 5.6 2.8 4.9 2.0 virginica < 123 7.7 2.8 6.7 2.1 virginica > 123 7.7 2.8 6.7 2.0 virginica < 124 6.3 2.7 4.9 1.9 virginica > 124 6.3 2.7 4.9 1.8 virginica < 125 6.7 3.3 5.7 2.2 virginica > 125 6.7 3.3 5.7 2.1 virginica 126 7.2 3.2 6.0 1.8 virginica 127 6.2 2.8 4.8 1.8 virginica What's not show here is that the colored output (supported by many terminals these days) also highlights exactly which elements in those rows differ. /Henrik On Sun, Jan 28, 2018 at 12:17 AM, Ulrik Stervbo <ulrik.ster...@gmail.com> wrote: > The anti_join from the package dplyr might also be handy. > > install.package("dplyr") > library(dplyr) > anti_join (x1, x2) > > You can get help on the different functions by ?function.name(), so > ?anti_join() will bring you help - and examples - on the anti_join > function. > > It might be worth testing your approach on a small subset of the data. That > makes it easier for you to follow what happens and evaluate the outcome. > > HTH > Ulrik > > Marsh Hardy ARA/RISK <mha...@ara.com> schrieb am So., 28. Jan. 2018, 04:14: > >> Cool, looks like that'd do it, almost as if converting an entire record to >> a character string and comparing strings. >> >> -- M. B. Hardy, statistician >> work: Applied Research Associates, S. E. Div. >> 8537 Six Forks Rd., # 6000 / Raleigh, NC 27615 >> <https://maps.google.com/?q=8537+Six+Forks+Rd.,+%23+6000+/+Raleigh,+NC+27615=gmail=g> >> -2963 >> (919) 582-3329, fax: 582-3301 >> home: 1020 W. South St. / Raleigh, NC 27603 >> <https://maps.google.com/?q=1020+W.+South+St.+/+Raleigh,+NC+27603=gmail=g> >> -2162 >> (919) 834-1245 >> ____________________ >> From: William Dunlap [wdun...@tibco.com] >> Sent: Saturday, January 27, 2018 4:57 PM >> To: Marsh Hardy ARA/RISK >> Cc: Ulrik Stervbo; Eric Berger; r-help@r-project.org >> Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. >> >> If your two objects have class "data.frame" (look at class(objectName)) >> and they >> both have the same number of columns and the same order of columns and the >> column types match closely enough (use all.equal(x1, x2) for that), then >> you can try >> which( rowSums( x1 != x2 ) > 0) >> E.g., >> > x1 <- data.frame(X=1:5, Y=rep(c("A","B"),c(3,2))) >> > x2 <- data.frame(X=c(1,2,-3,-4,5), Y=rep(c("A","B"),c(2,3))) >> > x1 >> X Y >> 1 1 A >> 2 2 A >> 3 3 A >> 4 4 B >> 5 5 B >> > x2 >>X Y >> 1 1 A >> 2 2 A >> 3 -3 B >> 4 -4 B >> 5 5 B >> > which( rowSums( x1 != x2 ) > 0) >> [1] 3 4 >> >> If you want to allow small numeric differences but exactly character >> matches >> you will have to get a bit fancier. Splitting the data.frames into >> character and >> numeric parts and comparing each works well. >> >> Bill Dunlap >> TIBCO Software >> wdunlap tibco.com<http://tibco.com> >> >> On Sat, Jan 27, 2018 at 1:18 PM, Marsh Hardy ARA/RISK <mha...@ara.com >> <mailto:mha...@ara.com>> wrote: >> Hi Guys, I apologize for my rank & utter newness at R. >> >> I used summary() and found about 95 variables, both character and numeric, >> all with "Length:368842" I assume is the # of records. >> >> I'd like to know the record number (row #?) of any record where the data >> doesn't match in the 2 files of what should be the same output. >> >> Thanks in advance, M. >> >> // >> >> From: Ulrik
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
The anti_join from the package dplyr might also be handy. install.package("dplyr") library(dplyr) anti_join (x1, x2) You can get help on the different functions by ?function.name(), so ?anti_join() will bring you help - and examples - on the anti_join function. It might be worth testing your approach on a small subset of the data. That makes it easier for you to follow what happens and evaluate the outcome. HTH Ulrik Marsh Hardy ARA/RISK <mha...@ara.com> schrieb am So., 28. Jan. 2018, 04:14: > Cool, looks like that'd do it, almost as if converting an entire record to > a character string and comparing strings. > > -- M. B. Hardy, statistician > work: Applied Research Associates, S. E. Div. > 8537 Six Forks Rd., # 6000 / Raleigh, NC 27615 > <https://maps.google.com/?q=8537+Six+Forks+Rd.,+%23+6000+/+Raleigh,+NC+27615=gmail=g> > -2963 > (919) 582-3329, fax: 582-3301 > home: 1020 W. South St. / Raleigh, NC 27603 > <https://maps.google.com/?q=1020+W.+South+St.+/+Raleigh,+NC+27603=gmail=g> > -2162 > (919) 834-1245 > > From: William Dunlap [wdun...@tibco.com] > Sent: Saturday, January 27, 2018 4:57 PM > To: Marsh Hardy ARA/RISK > Cc: Ulrik Stervbo; Eric Berger; r-help@r-project.org > Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. > > If your two objects have class "data.frame" (look at class(objectName)) > and they > both have the same number of columns and the same order of columns and the > column types match closely enough (use all.equal(x1, x2) for that), then > you can try > which( rowSums( x1 != x2 ) > 0) > E.g., > > x1 <- data.frame(X=1:5, Y=rep(c("A","B"),c(3,2))) > > x2 <- data.frame(X=c(1,2,-3,-4,5), Y=rep(c("A","B"),c(2,3))) > > x1 > X Y > 1 1 A > 2 2 A > 3 3 A > 4 4 B > 5 5 B > > x2 >X Y > 1 1 A > 2 2 A > 3 -3 B > 4 -4 B > 5 5 B > > which( rowSums( x1 != x2 ) > 0) > [1] 3 4 > > If you want to allow small numeric differences but exactly character > matches > you will have to get a bit fancier. Splitting the data.frames into > character and > numeric parts and comparing each works well. > > Bill Dunlap > TIBCO Software > wdunlap tibco.com<http://tibco.com> > > On Sat, Jan 27, 2018 at 1:18 PM, Marsh Hardy ARA/RISK <mha...@ara.com > <mailto:mha...@ara.com>> wrote: > Hi Guys, I apologize for my rank & utter newness at R. > > I used summary() and found about 95 variables, both character and numeric, > all with "Length:368842" I assume is the # of records. > > I'd like to know the record number (row #?) of any record where the data > doesn't match in the 2 files of what should be the same output. > > Thanks in advance, M. > > // > > From: Ulrik Stervbo [ulrik.ster...@gmail.com ulrik.ster...@gmail.com>] > Sent: Saturday, January 27, 2018 10:00 AM > To: Eric Berger > Cc: Marsh Hardy ARA/RISK; r-help@r-project.org<mailto:r-help@r-project.org > > > Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. > > Also, it will be easier to provide helpful information if you'd describe > what in your data you want to compare and what you hope to get out of the > comparison. > > Best wishes, > Ulrik > > Eric Berger <ericjber...@gmail.com<mailto:ericjber...@gmail.com> ericjber...@gmail.com<mailto:ericjber...@gmail.com>>> schrieb am Sa., 27. > Jan. 2018, 08:18: > Hi Marsh, > An RDS is not a data structure such as a data.frame. It can be anything. > For example if I want to save my objects a, b, c I could do: > > saveRDS( list(a,b,c,), file="tmp.RDS") > Then read them back later with > > myList <- readRDS( "tmp.RDS" ) > > Do you have additional information about your "RDSs" ? > > Eric > > > On Sat, Jan 27, 2018 at 6:54 AM, Marsh Hardy ARA/RISK <mha...@ara.com > <mailto:mha...@ara.com><mailto:mha...@ara.com<mailto:mha...@ara.com>>> > wrote: > > > Each RDS is 40 MBs. What's a slick code to compare them row by row, IDing > > row numbers with mismatches? > > > > Thanks in advance. > > > > // > > > > __ > > R-help@r-project.org<mailto:R-help@r-project.org> R-help@r-project.org<mailto:R-help@r-project.org>> mailing list -- To > UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide http://www.R-project.org/ > > posting-guide.html > > and provide commented
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
Cool, looks like that'd do it, almost as if converting an entire record to a character string and comparing strings. -- M. B. Hardy, statistician work: Applied Research Associates, S. E. Div. 8537 Six Forks Rd., # 6000 / Raleigh, NC 27615-2963 (919) 582-3329, fax: 582-3301 home: 1020 W. South St. / Raleigh, NC 27603-2162 (919) 834-1245 From: William Dunlap [wdun...@tibco.com] Sent: Saturday, January 27, 2018 4:57 PM To: Marsh Hardy ARA/RISK Cc: Ulrik Stervbo; Eric Berger; r-help@r-project.org Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. If your two objects have class "data.frame" (look at class(objectName)) and they both have the same number of columns and the same order of columns and the column types match closely enough (use all.equal(x1, x2) for that), then you can try which( rowSums( x1 != x2 ) > 0) E.g., > x1 <- data.frame(X=1:5, Y=rep(c("A","B"),c(3,2))) > x2 <- data.frame(X=c(1,2,-3,-4,5), Y=rep(c("A","B"),c(2,3))) > x1 X Y 1 1 A 2 2 A 3 3 A 4 4 B 5 5 B > x2 X Y 1 1 A 2 2 A 3 -3 B 4 -4 B 5 5 B > which( rowSums( x1 != x2 ) > 0) [1] 3 4 If you want to allow small numeric differences but exactly character matches you will have to get a bit fancier. Splitting the data.frames into character and numeric parts and comparing each works well. Bill Dunlap TIBCO Software wdunlap tibco.com<http://tibco.com> On Sat, Jan 27, 2018 at 1:18 PM, Marsh Hardy ARA/RISK <mha...@ara.com<mailto:mha...@ara.com>> wrote: Hi Guys, I apologize for my rank & utter newness at R. I used summary() and found about 95 variables, both character and numeric, all with "Length:368842" I assume is the # of records. I'd like to know the record number (row #?) of any record where the data doesn't match in the 2 files of what should be the same output. Thanks in advance, M. // From: Ulrik Stervbo [ulrik.ster...@gmail.com<mailto:ulrik.ster...@gmail.com>] Sent: Saturday, January 27, 2018 10:00 AM To: Eric Berger Cc: Marsh Hardy ARA/RISK; r-help@r-project.org<mailto:r-help@r-project.org> Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. Also, it will be easier to provide helpful information if you'd describe what in your data you want to compare and what you hope to get out of the comparison. Best wishes, Ulrik Eric Berger <ericjber...@gmail.com<mailto:ericjber...@gmail.com><mailto:ericjber...@gmail.com<mailto:ericjber...@gmail.com>>> schrieb am Sa., 27. Jan. 2018, 08:18: Hi Marsh, An RDS is not a data structure such as a data.frame. It can be anything. For example if I want to save my objects a, b, c I could do: > saveRDS( list(a,b,c,), file="tmp.RDS") Then read them back later with > myList <- readRDS( "tmp.RDS" ) Do you have additional information about your "RDSs" ? Eric On Sat, Jan 27, 2018 at 6:54 AM, Marsh Hardy ARA/RISK <mha...@ara.com<mailto:mha...@ara.com><mailto:mha...@ara.com<mailto:mha...@ara.com>>> wrote: > Each RDS is 40 MBs. What's a slick code to compare them row by row, IDing > row numbers with mismatches? > > Thanks in advance. > > // > > __ > R-help@r-project.org<mailto:R-help@r-project.org><mailto:R-help@r-project.org<mailto:R-help@r-project.org>> > mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] __ R-help@r-project.org<mailto:R-help@r-project.org><mailto:R-help@r-project.org<mailto:R-help@r-project.org>> mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org<mailto:R-help@r-project.org> mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
If your two objects have class "data.frame" (look at class(objectName)) and they both have the same number of columns and the same order of columns and the column types match closely enough (use all.equal(x1, x2) for that), then you can try which( rowSums( x1 != x2 ) > 0) E.g., > x1 <- data.frame(X=1:5, Y=rep(c("A","B"),c(3,2))) > x2 <- data.frame(X=c(1,2,-3,-4,5), Y=rep(c("A","B"),c(2,3))) > x1 X Y 1 1 A 2 2 A 3 3 A 4 4 B 5 5 B > x2 X Y 1 1 A 2 2 A 3 -3 B 4 -4 B 5 5 B > which( rowSums( x1 != x2 ) > 0) [1] 3 4 If you want to allow small numeric differences but exactly character matches you will have to get a bit fancier. Splitting the data.frames into character and numeric parts and comparing each works well. Bill Dunlap TIBCO Software wdunlap tibco.com On Sat, Jan 27, 2018 at 1:18 PM, Marsh Hardy ARA/RISK <mha...@ara.com> wrote: > Hi Guys, I apologize for my rank & utter newness at R. > > I used summary() and found about 95 variables, both character and numeric, > all with "Length:368842" I assume is the # of records. > > I'd like to know the record number (row #?) of any record where the data > doesn't match in the 2 files of what should be the same output. > > Thanks in advance, M. > > // > > From: Ulrik Stervbo [ulrik.ster...@gmail.com] > Sent: Saturday, January 27, 2018 10:00 AM > To: Eric Berger > Cc: Marsh Hardy ARA/RISK; r-help@r-project.org > Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. > > Also, it will be easier to provide helpful information if you'd describe > what in your data you want to compare and what you hope to get out of the > comparison. > > Best wishes, > Ulrik > > Eric Berger <ericjber...@gmail.com<mailto:ericjber...@gmail.com>> schrieb > am Sa., 27. Jan. 2018, 08:18: > Hi Marsh, > An RDS is not a data structure such as a data.frame. It can be anything. > For example if I want to save my objects a, b, c I could do: > > saveRDS( list(a,b,c,), file="tmp.RDS") > Then read them back later with > > myList <- readRDS( "tmp.RDS" ) > > Do you have additional information about your "RDSs" ? > > Eric > > > On Sat, Jan 27, 2018 at 6:54 AM, Marsh Hardy ARA/RISK <mha...@ara.com > <mailto:mha...@ara.com>> > wrote: > > > Each RDS is 40 MBs. What's a slick code to compare them row by row, IDing > > row numbers with mismatches? > > > > Thanks in advance. > > > > // > > > > __ > > R-help@r-project.org<mailto:R-help@r-project.org> mailing list -- To > UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide http://www.R-project.org/ > > posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > > > > [[alternative HTML version deleted]] > > __ > R-help@r-project.org<mailto:R-help@r-project.org> mailing list -- To > UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
> On Jan 27, 2018, at 1:18 PM, Marsh Hardy ARA/RISK <mha...@ara.com> wrote: > > Hi Guys, I apologize for my rank & utter newness at R. > > I used summary() and found about 95 variables, both character and numeric, > all with "Length:368842" I assume is the # of records. > > I'd like to know the record number (row #?) of any record where the data > doesn't match in the 2 files of what should be the same output. The 'length' function returns the number of items at the top level of a list. As such it returns the number of columns of a dataframe which is a type of list. The quotes around "Length:368842" make it appear that you are quoting from some sort of output, although its nature is unclear. Rather than abstracting from information that you don't know how to interpret it would have been better to include the entire output. The `summary` function is generic and therefore can vary widely in what it prints to the console. You should instead post the output from str() applied to each of your "files". It does a better job of displaying object structure. -- David. > Thanks in advance, M. > > // > > From: Ulrik Stervbo [ulrik.ster...@gmail.com] > Sent: Saturday, January 27, 2018 10:00 AM > To: Eric Berger > Cc: Marsh Hardy ARA/RISK; r-help@r-project.org > Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. > > Also, it will be easier to provide helpful information if you'd describe what > in your data you want to compare and what you hope to get out of the > comparison. > > Best wishes, > Ulrik > > Eric Berger <ericjber...@gmail.com<mailto:ericjber...@gmail.com>> schrieb am > Sa., 27. Jan. 2018, 08:18: > Hi Marsh, > An RDS is not a data structure such as a data.frame. It can be anything. > For example if I want to save my objects a, b, c I could do: >> saveRDS( list(a,b,c,), file="tmp.RDS") > Then read them back later with >> myList <- readRDS( "tmp.RDS" ) > > Do you have additional information about your "RDSs" ? > > Eric > > > On Sat, Jan 27, 2018 at 6:54 AM, Marsh Hardy ARA/RISK > <mha...@ara.com<mailto:mha...@ara.com>> > wrote: > >> Each RDS is 40 MBs. What's a slick code to compare them row by row, IDing >> row numbers with mismatches? >> >> Thanks in advance. >> >> // >> >> __ >> R-help@r-project.org<mailto:R-help@r-project.org> mailing list -- To >> UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/ >> posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> > >[[alternative HTML version deleted]] > > __ > R-help@r-project.org<mailto:R-help@r-project.org> mailing list -- To > UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. David Winsemius Alameda, CA, USA 'Any technology distinguishable from magic is insufficiently advanced.' -Gehm's Corollary to Clarke's Third Law __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
Hi Guys, I apologize for my rank & utter newness at R. I used summary() and found about 95 variables, both character and numeric, all with "Length:368842" I assume is the # of records. I'd like to know the record number (row #?) of any record where the data doesn't match in the 2 files of what should be the same output. Thanks in advance, M. // From: Ulrik Stervbo [ulrik.ster...@gmail.com] Sent: Saturday, January 27, 2018 10:00 AM To: Eric Berger Cc: Marsh Hardy ARA/RISK; r-help@r-project.org Subject: Re: [R] Newbie wants to compare 2 huge RDSs row by row. Also, it will be easier to provide helpful information if you'd describe what in your data you want to compare and what you hope to get out of the comparison. Best wishes, Ulrik Eric Berger <ericjber...@gmail.com<mailto:ericjber...@gmail.com>> schrieb am Sa., 27. Jan. 2018, 08:18: Hi Marsh, An RDS is not a data structure such as a data.frame. It can be anything. For example if I want to save my objects a, b, c I could do: > saveRDS( list(a,b,c,), file="tmp.RDS") Then read them back later with > myList <- readRDS( "tmp.RDS" ) Do you have additional information about your "RDSs" ? Eric On Sat, Jan 27, 2018 at 6:54 AM, Marsh Hardy ARA/RISK <mha...@ara.com<mailto:mha...@ara.com>> wrote: > Each RDS is 40 MBs. What's a slick code to compare them row by row, IDing > row numbers with mismatches? > > Thanks in advance. > > // > > __ > R-help@r-project.org<mailto:R-help@r-project.org> mailing list -- To > UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] __ R-help@r-project.org<mailto:R-help@r-project.org> mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
Also, it will be easier to provide helpful information if you'd describe what in your data you want to compare and what you hope to get out of the comparison. Best wishes, Ulrik Eric Bergerschrieb am Sa., 27. Jan. 2018, 08:18: > Hi Marsh, > An RDS is not a data structure such as a data.frame. It can be anything. > For example if I want to save my objects a, b, c I could do: > > saveRDS( list(a,b,c,), file="tmp.RDS") > Then read them back later with > > myList <- readRDS( "tmp.RDS" ) > > Do you have additional information about your "RDSs" ? > > Eric > > > On Sat, Jan 27, 2018 at 6:54 AM, Marsh Hardy ARA/RISK > wrote: > > > Each RDS is 40 MBs. What's a slick code to compare them row by row, IDing > > row numbers with mismatches? > > > > Thanks in advance. > > > > // > > > > __ > > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide http://www.R-project.org/ > > posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > > > > [[alternative HTML version deleted]] > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Newbie wants to compare 2 huge RDSs row by row.
Hi Marsh, An RDS is not a data structure such as a data.frame. It can be anything. For example if I want to save my objects a, b, c I could do: > saveRDS( list(a,b,c,), file="tmp.RDS") Then read them back later with > myList <- readRDS( "tmp.RDS" ) Do you have additional information about your "RDSs" ? Eric On Sat, Jan 27, 2018 at 6:54 AM, Marsh Hardy ARA/RISKwrote: > Each RDS is 40 MBs. What's a slick code to compare them row by row, IDing > row numbers with mismatches? > > Thanks in advance. > > // > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.