Re: [R-SIG-Mac] installing multiple versions of R

2008-12-01 Thread Steve Lianoglou

Hi Stephen,

On Dec 1, 2008, at 11:29 AM, stephen sefick wrote:


I would like to install R 2.7.2 in || with R 2.8 to test what is wrong
with a package I am maintaining.  It worked fine with R 2.7.2 chron
2.3-24 and doesn't work with R 2.8 chron 2.3-24 or chron 2.3-25.
thanks



You can easily do so.

Just download the appropriate installers for each version and install  
them:


2.8.x : http://cran.r-project.org/bin/macosx/R-2.8.0.dmg
2.7.x : http://cran.r-project.org/bin/macosx/old/R-2.7.2.dmg

FYI, they'll install in:
/Library/Frameworks/R.framework/Versions/2.*

You can switch between which version to run at go time as I  
described in my previous email:

 (i) either by using the RSwitch application; or
 (ii) by renaming the R.app that's installed to R28.app, and R27.app  
as appropriate.


Both RSwitch and the R guis can be downloaded from:
http://r.research.att.com/

HTH,
-steve

ps - I'm not sure of (ii), since I haven't tested it for R27 vs R28  
(only R in 68bit vs R 32bit, which works), though I believe it works.  
I have tested and previously used (i).


--
Steve Lianoglou
Graduate Student: Physiology, Biophysics and Systems Biology
Weill Medical College of Cornell University

http://cbio.mskcc.org/~lianos

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Re: [R-SIG-Mac] installing multiple versions of R

2008-12-01 Thread stephen sefick
I downloaded the Rswitch application, but the current version and that
is the only version that is available even if I push the rediscover
button.

On Mon, Dec 1, 2008 at 11:46 AM, Steve Lianoglou
[EMAIL PROTECTED] wrote:
 Hi Stephen,

 On Dec 1, 2008, at 11:29 AM, stephen sefick wrote:

 I would like to install R 2.7.2 in || with R 2.8 to test what is wrong
 with a package I am maintaining.  It worked fine with R 2.7.2 chron
 2.3-24 and doesn't work with R 2.8 chron 2.3-24 or chron 2.3-25.
 thanks


 You can easily do so.

 Just download the appropriate installers for each version and install them:

 2.8.x : http://cran.r-project.org/bin/macosx/R-2.8.0.dmg
 2.7.x : http://cran.r-project.org/bin/macosx/old/R-2.7.2.dmg

 FYI, they'll install in:
 /Library/Frameworks/R.framework/Versions/2.*

 You can switch between which version to run at go time as I described in
 my previous email:
  (i) either by using the RSwitch application; or
  (ii) by renaming the R.app that's installed to R28.app, and R27.app as
 appropriate.

 Both RSwitch and the R guis can be downloaded from:
 http://r.research.att.com/

 HTH,
 -steve

 ps - I'm not sure of (ii), since I haven't tested it for R27 vs R28 (only R
 in 68bit vs R 32bit, which works), though I believe it works. I have tested
 and previously used (i).

 --
 Steve Lianoglou
 Graduate Student: Physiology, Biophysics and Systems Biology
 Weill Medical College of Cornell University

 http://cbio.mskcc.org/~lianos







-- 
Stephen Sefick

Let's not spend our time and resources thinking about things that are
so little or so large that all they really do for us is puff us up and
make us feel like gods.  We are mammals, and have not exhausted the
annoying little problems of being mammals.

-K. Mullis

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Re: [R-SIG-Mac] installing multiple versions of R

2008-12-01 Thread Steve Lianoglou

I downloaded the Rswitch application, but the current version and that
is the only version that is available even if I push the rediscover
button.


Weird ... and you have both versions installed? ie. you have full  
install trees under:


/Library/Frameworks/R.framework/Versions/2.7 ; and
/Library/Frameworks/R.framework/Versions/2.8
?

The second approach I outlined (using different versions of R.app)  
won't work either w/o successfully using RSwitch, either (just tried  
it).


Weird ... not sure what to say if both versions of R are installed  
correctly.


I'm just guessing, but if you change the /Library/Framework/ 
R.framework/Versions/Current link to point to 2.7 instead of 2.8,  
that might work as well (I feel like that's the only thing that  
RSwitch app does, but I'm not certain).


If all of the above isn't working, I guess we'll have to wait for an R/ 
mac guru to pop in. What version of OS X are you using and are you  
using the appropriate leopard/tiger builds?


-steve




On Mon, Dec 1, 2008 at 11:46 AM, Steve Lianoglou
[EMAIL PROTECTED] wrote:

Hi Stephen,

On Dec 1, 2008, at 11:29 AM, stephen sefick wrote:

I would like to install R 2.7.2 in || with R 2.8 to test what is  
wrong

with a package I am maintaining.  It worked fine with R 2.7.2 chron
2.3-24 and doesn't work with R 2.8 chron 2.3-24 or chron 2.3-25.
thanks



You can easily do so.

Just download the appropriate installers for each version and  
install them:


2.8.x : http://cran.r-project.org/bin/macosx/R-2.8.0.dmg
2.7.x : http://cran.r-project.org/bin/macosx/old/R-2.7.2.dmg

FYI, they'll install in:
/Library/Frameworks/R.framework/Versions/2.*

You can switch between which version to run at go time as I  
described in

my previous email:
(i) either by using the RSwitch application; or
(ii) by renaming the R.app that's installed to R28.app, and R27.app  
as

appropriate.

Both RSwitch and the R guis can be downloaded from:
http://r.research.att.com/

HTH,
-steve

ps - I'm not sure of (ii), since I haven't tested it for R27 vs R28  
(only R
in 68bit vs R 32bit, which works), though I believe it works. I  
have tested

and previously used (i).

--
Steve Lianoglou
Graduate Student: Physiology, Biophysics and Systems Biology
Weill Medical College of Cornell University

http://cbio.mskcc.org/~lianos








--
Stephen Sefick

Let's not spend our time and resources thinking about things that are
so little or so large that all they really do for us is puff us up and
make us feel like gods.  We are mammals, and have not exhausted the
annoying little problems of being mammals.

-K. Mullis


--
Steve Lianoglou
Graduate Student: Physiology, Biophysics and Systems Biology
Weill Medical College of Cornell University

http://cbio.mskcc.org/~lianos

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Re: [R-SIG-Mac] installing multiple versions of R

2008-12-01 Thread stephen sefick
I am just installing the binaries provided without changing anything.
I just downloaded and installed R 2.7.2 and R switch only sees 2.7.2
and not 2.6 or 2.8.

Mac OS X 10.5.5

On Mon, Dec 1, 2008 at 12:15 PM, Steve Lianoglou
[EMAIL PROTECTED] wrote:
 I downloaded the Rswitch application, but the current version and that
 is the only version that is available even if I push the rediscover
 button.

 Weird ... and you have both versions installed? ie. you have full install
 trees under:

 /Library/Frameworks/R.framework/Versions/2.7 ; and
 /Library/Frameworks/R.framework/Versions/2.8
 ?

 The second approach I outlined (using different versions of R.app) won't
 work either w/o successfully using RSwitch, either (just tried it).

 Weird ... not sure what to say if both versions of R are installed
 correctly.

 I'm just guessing, but if you change the
 /Library/Framework/R.framework/Versions/Current link to point to 2.7
 instead of 2.8, that might work as well (I feel like that's the only thing
 that RSwitch app does, but I'm not certain).

 If all of the above isn't working, I guess we'll have to wait for an R/mac
 guru to pop in. What version of OS X are you using and are you using the
 appropriate leopard/tiger builds?

 -steve



 On Mon, Dec 1, 2008 at 11:46 AM, Steve Lianoglou
 [EMAIL PROTECTED] wrote:

 Hi Stephen,

 On Dec 1, 2008, at 11:29 AM, stephen sefick wrote:

 I would like to install R 2.7.2 in || with R 2.8 to test what is wrong
 with a package I am maintaining.  It worked fine with R 2.7.2 chron
 2.3-24 and doesn't work with R 2.8 chron 2.3-24 or chron 2.3-25.
 thanks


 You can easily do so.

 Just download the appropriate installers for each version and install
 them:

 2.8.x : http://cran.r-project.org/bin/macosx/R-2.8.0.dmg
 2.7.x : http://cran.r-project.org/bin/macosx/old/R-2.7.2.dmg

 FYI, they'll install in:
 /Library/Frameworks/R.framework/Versions/2.*

 You can switch between which version to run at go time as I described
 in
 my previous email:
 (i) either by using the RSwitch application; or
 (ii) by renaming the R.app that's installed to R28.app, and R27.app as
 appropriate.

 Both RSwitch and the R guis can be downloaded from:
 http://r.research.att.com/

 HTH,
 -steve

 ps - I'm not sure of (ii), since I haven't tested it for R27 vs R28 (only
 R
 in 68bit vs R 32bit, which works), though I believe it works. I have
 tested
 and previously used (i).

 --
 Steve Lianoglou
 Graduate Student: Physiology, Biophysics and Systems Biology
 Weill Medical College of Cornell University

 http://cbio.mskcc.org/~lianos







 --
 Stephen Sefick

 Let's not spend our time and resources thinking about things that are
 so little or so large that all they really do for us is puff us up and
 make us feel like gods.  We are mammals, and have not exhausted the
 annoying little problems of being mammals.

-K. Mullis

 --
 Steve Lianoglou
 Graduate Student: Physiology, Biophysics and Systems Biology
 Weill Medical College of Cornell University

 http://cbio.mskcc.org/~lianos







-- 
Stephen Sefick

Let's not spend our time and resources thinking about things that are
so little or so large that all they really do for us is puff us up and
make us feel like gods.  We are mammals, and have not exhausted the
annoying little problems of being mammals.

-K. Mullis

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Re: [R-SIG-Mac] installing multiple versions of R

2008-12-01 Thread Steven McKinney
Hi Stephen,

When you are attempting to install the second
version of R, have you been doing the following step?
(This is on the Read Me second window of the
Mac installer dialog.)

 Note: By default the installer upgrades previous 
 R version if present. If you want to keep your 
 old R version, remove R-Framework.pkg from 
 /Library/Receipts before proceeding.

So if you install R-2.8 using R-2.8.0.dmg,
then before you install R-2.7.2 using 
R-2.7.2.dmg, navigate to /Library/Receipts
in Finder and drag R-Framework.pkg to the trash.



Best

Steven McKinney

Statistician
Molecular Oncology and Breast Cancer Program
British Columbia Cancer Research Centre

email: smckinney +at+ bccrc +dot+ ca

tel: 604-675-8000 x7561

BCCRC
Molecular Oncology
675 West 10th Ave, Floor 4
Vancouver B.C. 
V5Z 1L3
Canada




-Original Message-
From: [EMAIL PROTECTED] on behalf of stephen sefick
Sent: Mon 12/1/2008 9:43 AM
To: Steve Lianoglou
Cc: R List SIG Mac
Subject: Re: [R-SIG-Mac] installing multiple versions of R
 
I am just installing the binaries provided without changing anything.
I just downloaded and installed R 2.7.2 and R switch only sees 2.7.2
and not 2.6 or 2.8.

Mac OS X 10.5.5

On Mon, Dec 1, 2008 at 12:15 PM, Steve Lianoglou
[EMAIL PROTECTED] wrote:
 I downloaded the Rswitch application, but the current version and that
 is the only version that is available even if I push the rediscover
 button.

 Weird ... and you have both versions installed? ie. you have full install
 trees under:

 /Library/Frameworks/R.framework/Versions/2.7 ; and
 /Library/Frameworks/R.framework/Versions/2.8
 ?

 The second approach I outlined (using different versions of R.app) won't
 work either w/o successfully using RSwitch, either (just tried it).

 Weird ... not sure what to say if both versions of R are installed
 correctly.

 I'm just guessing, but if you change the
 /Library/Framework/R.framework/Versions/Current link to point to 2.7
 instead of 2.8, that might work as well (I feel like that's the only thing
 that RSwitch app does, but I'm not certain).

 If all of the above isn't working, I guess we'll have to wait for an R/mac
 guru to pop in. What version of OS X are you using and are you using the
 appropriate leopard/tiger builds?

 -steve



 On Mon, Dec 1, 2008 at 11:46 AM, Steve Lianoglou
 [EMAIL PROTECTED] wrote:

 Hi Stephen,

 On Dec 1, 2008, at 11:29 AM, stephen sefick wrote:

 I would like to install R 2.7.2 in || with R 2.8 to test what is wrong
 with a package I am maintaining.  It worked fine with R 2.7.2 chron
 2.3-24 and doesn't work with R 2.8 chron 2.3-24 or chron 2.3-25.
 thanks


 You can easily do so.

 Just download the appropriate installers for each version and install
 them:

 2.8.x : http://cran.r-project.org/bin/macosx/R-2.8.0.dmg
 2.7.x : http://cran.r-project.org/bin/macosx/old/R-2.7.2.dmg

 FYI, they'll install in:
 /Library/Frameworks/R.framework/Versions/2.*

 You can switch between which version to run at go time as I described
 in
 my previous email:
 (i) either by using the RSwitch application; or
 (ii) by renaming the R.app that's installed to R28.app, and R27.app as
 appropriate.

 Both RSwitch and the R guis can be downloaded from:
 http://r.research.att.com/

 HTH,
 -steve

 ps - I'm not sure of (ii), since I haven't tested it for R27 vs R28 (only
 R
 in 68bit vs R 32bit, which works), though I believe it works. I have
 tested
 and previously used (i).

 --
 Steve Lianoglou
 Graduate Student: Physiology, Biophysics and Systems Biology
 Weill Medical College of Cornell University

 http://cbio.mskcc.org/~lianos







 --
 Stephen Sefick

 Let's not spend our time and resources thinking about things that are
 so little or so large that all they really do for us is puff us up and
 make us feel like gods.  We are mammals, and have not exhausted the
 annoying little problems of being mammals.

-K. Mullis

 --
 Steve Lianoglou
 Graduate Student: Physiology, Biophysics and Systems Biology
 Weill Medical College of Cornell University

 http://cbio.mskcc.org/~lianos







-- 
Stephen Sefick

Let's not spend our time and resources thinking about things that are
so little or so large that all they really do for us is puff us up and
make us feel like gods.  We are mammals, and have not exhausted the
annoying little problems of being mammals.

-K. Mullis

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