[R-sig-phylo] Very long tree.
I have tried tetrapod tree (it is very long ultrametric tree: http://www.onezoom.org/user/tetrapods_tree.js - 22821 species). I need to know distances from a root up to the ends of branches. But something was wrong: the command that I wrote (library(ape) tree - read.tree (file.choose()) n - Ntip(tree) bt.times-branching.times(tree) res - c(rep(bt.times[1], n), bt.times[1] - bt.times) res was disappeared and not all dates was appeared. When I use short tree then all OK. Can you halp? [[alternative HTML version deleted]] ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
[R-sig-phylo] Distances from nods to the root.
Which package allow calculate all distances from all nods to the root? Alexey. [[alternative HTML version deleted]] ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
[R-sig-phylo] ape package.
Whether anybody help? I can non start the ape package. when I do library(ape) it give: Error in library(ape) : there is no package called 'ape' (I use R-3.0.3-win) ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/