[R-sig-phylo] Simulating tree from a given tree

2018-07-29 Thread Miguel.Verdu
Hi list:

Is there any function to simulate a tree from a given tree?. For example, I 
have a tree encompassing 10 Million years and I would like to simulate the 
"growth" of such tree for the following 5 MY.

Thanks in advance

Miguel Verdú

--

Centro de Investigaciones sobre Desertificacion
(CSIC-UV-GV)
Carretera Moncada - Náquera, Km. 4,5
Apartado Oficial
46113 Moncada (Valencia)
Spain
Tel +34 96 3424204
Fax +34 96 3424160
www.uv.es/verducam

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[R-sig-phylo] Negative transition rates in diversitree

2017-02-23 Thread Miguel.Verdu
Hi all

I am fitting multitrait MuSSE models in the diversitree package to study 
correlated evolution between binary variables and some transition rates (qij) 
are negative. What is the meaning of negative transition rates? 

Thanks in advance


Miguel Verdú

--

Centro de Investigaciones sobre Desertificacion
(CSIC-UV-GV)
Carretera Moncada - Náquera, Km. 4,5
Apartado Oficial
46113 Moncada (Valencia)
Spain
Tel +34 96 3424204
Fax +34 96 3424160
www.uv.es/verducam

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