Re: [rkward-devel] Question regarding menu ordering for plugins

2014-11-27 Thread Stefan Rödiger
My vote: alphabetical sorting only within each group

Kind regards
Stefan


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Re: [rkward-devel] first draft/proposal: new graphics devices section

2013-10-07 Thread Stefan Rödiger

Hi Meik,




the draft looks great (nice example BTW ;) )! Basically I would really love to see something like this. The devs of Rstudio have put in a similar position and I think they did it for a good reason.

But I think it is also a matter of the use case. The placement of the figure is good for small plots and preliminary investigations. I prefer to use the size of the entire window (which involves switching to the separate window of course) with splitting and so on. Do you think is it possible to have a button which can switch between the two states.


the most difficult decision is where to put the menu entries. in the draft
the graphics device has focus and its menu entries completely replaced the
usually available menu. but maybe the normal menu should simply be added to,
and not being replaced?



I think the visual feedback of the focus lost is ok as is in theory. I wouldnt add it. But again ini Rstudio they have it in proximity to the plot.




also, if there were more graphics devices active, youd probably need tabs in
that section, too. alternatively, the graphics devices button could work as
a tab (i.e., be called graphics device #1 instead and be added more bottons
for additional devices).



That is a tricky one. The interface is quite tabbed already. I have no real opinion on this ... .

Did you check how they are doing it in Rstudio?



Kind regards

Stefan




Gesendet:Sonntag, 06. Oktober 2013 um 21:55 Uhr
Von:meik michalke meik.micha...@uni-duesseldorf.de
An:rkward-devel@lists.sourceforge.net
Betreff:[rkward-devel] first draft/proposal: new graphics devices section

hi,

a while ago, we were discussing the possible inclusion of the graphics devices
somewhere into the main window of RKWard, instead of (or in addition to)
opening it in a separate window.

i made a first draft of how this could look like:
http://reaktanz.de/stuff/R/RKWard_graphics_section.png

the most difficult decision is where to put the menu entries. in the draft
the graphics device has focus and its menu entries completely replaced the
usually available menu. but maybe the normal menu should simply be added to,
and not being replaced?

also, if there were more graphics devices active, youd probably need tabs in
that section, too. alternatively, the graphics devices button could work as
a tab (i.e., be called graphics device #1 instead and be added more bottons
for additional devices).

what do you think?


viele gre :: m.eik

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[rkward-devel] box_plot

2011-12-13 Thread Stefan Rödiger
Hi Thomas,

the latest change in the boxplot was not specifically what I had in mind. What 
I mean is that trim gets visible if the arithmetic mean as option is chosen. 
But I guess people will be smart enough to figure out that trim is an option 
of the arithmetic mean exclusively  but not of the other types of mean.

Nice change anyway.

Regards
Stefan

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Re: [rkward-devel] wilcoxon tests

2011-12-12 Thread Stefan Rödiger
On Monday 12 December 2011 19:47:56 Thomas Friedrichsmeier wrote:
 Hi,
 
 On Monday 12 December 2011, meik michalke wrote:
  looking at the details sections of both ?wilcox.test and
  ?exactRankTests:::wilcox.exact, the two functions used by the dialogs
  Wilcoxon Test and Wilcoxon Exact Test, they seem to differ only in
  the handling of ties. may i merge the two into one dialog? i find the
  current split into two separate dialogs a little confusing, given that
  both do exact tests under certain conditions. both functions have almost
  identical signatures and both return an object of class htest.
 
 sounds reasonable to me. Stefan, you created those plugins. Do you agree,
 too?

No objection to that

 
  btw, i also added support for tests against costants to the t-test
  plugin, is that ok?
 
 This looks ok to me for the moment. I corrected a typo, and the initial
 value of the constant.
 
 However in the long run, there is a bunch more features that we should add:
 - Testing an arbitrary number of variables against each other or against a
 constant
 - Support for data in long format (single outcome variable and grouping
 factor). Using all levels or selected levels of the grouping factor(*).
 - Various modes of alpha correction
 
 I think having all of that inside a single plugin will be too much, so we
 will have to split all that into two or more plugins. Once at that point,
 I think it may make sense to restore one very simple t-test plugin,
 which may or may not look like the one without support for testing against
 constants.
 
 BTW, while testing your addition, I noted some more details that could be
 improved:
 - Paired sample and Assume equal variances should probably be on the
 same tab. Having mutually exclusive options on different tabs has some
 potential for confusion.
 - Print confidence interval should be a checkable frame, instead of a
 checkbox.
 Should I go ahead and do that, or are you still working on the plugin?
 
 Regards
 Thomas
 
 (*) And I know, that's another use case for a valueselector.

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Re: [rkward-devel] [rkward-cvs] SF.net SVN: rkward:[4063] trunk/rkward/rkward/plugins/00saveload/import

2011-12-12 Thread Stefan Rödiger
On Sunday 04 December 2011 20:44:42 Milan Bouchet-Valat wrote:
 Le dimanche 04 décembre 2011 à 20:24 +0100, Thomas Friedrichsmeier a
 
 écrit :
  well, for all I can see, all available solutions have some real
  drawbacks. On my system, perl is no problem, while my rJava installation
  tends to be broken, frequently. But certainly, for many users it will be
  the other way around.
 
 FWIW, the RODBC package can be used to read .xls and .xlsx files on
 Windows, since a driver is installed by default on that platform (as a
 bonus, Access .mdb and .mdbx files are also read). As it's written by
 Microsoft, we can expect it to support correctly these formats. ;-)
 

Hi Milan,

sorry for the late reply! I'm still looking at all options and work on other 
thinks. But yes indeed this is an option too. It appears that on the long run 
we have to implement the best platform specific solution, which makes 
everything a bit more complicated, as suggested by Thomas. That's a pity IMHO.

 The code is relatively simple, and well documented (see [1], p. 16). For
 illustration purposes, here's what I'm using in a Rcmdr plugin I wrote
 (doItAndPrint() is Rcmdr way of running a command):
 
 # 'file' contains the path to the file
 ext - tolower(substring(file, nchar(file) - sop + 2, nchar(file)))
 channelStr - switch(EXPR = ext,
xls = odbcConnectExcel,
xlsx = odbcConnectExcel2007,
mdb = odbcConnectAccess,
accdb = odbcConnectAccess2007)
 doItAndPrint(paste(channel - , channelStr, (\, file, \),
sep=))
 
 # For Excel and Access, need to select a particular sheet or table
 tabdat - sqlTables(channel)
 names(tabdat) - tolower(names(tabdat))
 
 if(ext == mdb || ext == accdb)
 tabdat - tabdat[tabdat$table_type == TABLE, 3]
 
 if(ext == xls || ext == xlsx) {
 tabname - tabdat$table_name
 tabdat - ifelse(tabdat$table_type == TABLE,
  substring(tabname, 2, nchar(tabname) - 2),
  substring(tabname, 1, nchar(tabname) - 1))
 }
 
 # If there are several tables
 if(length(tabdat)  1)
 fil - tk_select.list(sort(tabdat),
   title=gettext_Rcmdr(Select one table))
 else
 fil - tabdat
 
 if(fil == ) {
 Message(gettext_Rcmdr(No table selected), type=error)
 return()
 }
 
 if(ext == xls || ext == xlsx)
 fil - paste([, fil, $], sep = )
 
 # Retrieve the data
 command - paste(sqlQuery(channel=channel, select * from , fil,),
sep = )
 doItAndPrint(paste(corpusDataset - , command, sep = ))
 doItAndPrint(odbcCloseAll())
 
 
 Just my two cents
 
 
 1: http://cran.r-project.org/web/packages/RODBC/vignettes/RODBC.pdf
 
 

Thanks for sharing!

Regards
Stefan

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Re: [rkward-devel] [rkward-cvs] SF.net SVN: rkward:[4088] trunk/rkward/rkward/plugins/uni1.2

2011-12-10 Thread Stefan Rödiger
On Saturday 10 December 2011 20:01:22 Thomas Friedrichsmeier wrote:
 Hi,
 
 On Friday 09 December 2011, s...@users.sourceforge.net wrote:
  * option to output results to a file added (or better embed export
  plugin?)
 
 what usecase do you have in mind? If the idea is to continue working on the
 computed data, I think it might make more sense to add an option to save
 results to an R object, instead? Users could still export that as CVS in a
 subsequent step, if needed.
 
 Regards
 Thomas

Hi Thomas,

okay, I didn't think of that but yes saving as R object is of course a good 
idea not to say better idea. This would solve the export question 
considerably.

What I have in mind is something as simple and convenient as possible and 
additionally people who have to collaborate with people from a spread sheet 
world (EXCEL ...) (which applies to me right now). For those two plugins in 
question it makes a lot of sense because they can crunch down huge amounts of 
data for screening purposes. Believe me it is really challenging to analyze 
such things with EXCEL but subsequent work (some sorting, plotting) is not. 
Currently I'm working with some people on another paper and the first (boring) 
step is to separate promising data from noise. Actually I can envision such an 
option (may it be as R object or whatever) in many more plugins. Hope you get 
what I mean.

But yes, let's go for the R object idea.

Regards
Stefan

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Re: [rkward-devel] [rkward-announce] RKWard 0.5.7 is released

2011-10-24 Thread Stefan Rödiger
On Monday 24 October 2011 10:02:46 Thomas Friedrichsmeier wrote:
 Hi!
 
 Just a quick note to let you know, that RKWard 0.5.7 has been released,
 yesterday (but I did not find the time to write an announcement, then). As
 usual, links to downloads, as well as a summary of new and changed features
 is available on our website at http://rkward.sf.net .
 
 Thanks a lot to all contributors!
 
 Thomas

Congrats, wonderful release.

Regards
Stefan

P.S.: I had to compile it (the deb (0.5.7-1) from apt didn't work) since there 
was some mismatch with R (2.14.0~20111021-1, Debian/Sid).

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Re: [rkward-devel] New package management

2011-09-26 Thread Stefan Rödiger
On Monday 26 September 2011 10:48:20 Thomas Friedrichsmeier wrote:
 Hi,
 
 On Sunday 25 September 2011, Stefan Rödiger wrote:
  congrats to the new package management. Generally I like the new dialog
  but I'm not entirely sure about the somewhat hidden feature to remove
  a package. Wouldn't it be better to have a single tab just for package
  removal?
 
 to those who have already tried it: The actual removal was not implemented
 until a few minutes ago, so if you found the feature in the UI, but could
 not get it to work, try again after an svn up.
 
 I am somewhat biased against a new tab, because this means more code than
 it may look like, and I believe package removal is not a feature that will
 be used very often.

ok, I can understand that.

 Also, I feel encouraged by the fact that after all,
 obviously you found the feature, before I even wrote anything about it.

Well, yes I try to keep up with the development. And I guess your read about 
the neutrinos, lately. Neutrino. Knock knock, who is there? ;)

 I
 have added some tool tips to the header of the list, which I hope will
 give some more hints about less obvious parts. If you have ideas for more
 refinements within the current approach, I'm all ears. But of course, if
 everybody agrees that package removal should be in a separate tab, let me
 know, too.

I guess I'm the only one.

 
 On a more general note, everybody, please test the new package management
 dialog. A lot of code has changed, here, and I wouldn't be surprised, if
 there is still a bunch of bugs to find.

So far I tested installation, update and removal of packages. Seems to work 
well so far. I'll keep an eye on that.

 
 Regards
 Thomas

Regards
Stefan

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[rkward-devel] New package management

2011-09-25 Thread Stefan Rödiger
Hi list,

congrats to the new package management. Generally I like the new dialog but 
I'm not entirely sure about the somewhat hidden feature to remove a package. 
Wouldn't it be better to have a single tab just for package removal?

Regards
Stefan 

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Re: [rkward-devel] [rkward-announce] Upcoming release, call for testing RKWard 0.5.6

2011-05-18 Thread Stefan Rödiger
Am Mittwoch 18 Mai 2011, 08:46:10 schrieb Thomas Friedrichsmeier:
 On Tuesday 17 May 2011, Stefan Rödiger wrote:
   For Debian, we do not have an easy way to build snapshot binaries,
   unfortunately. However, you can also build your own .deb directly from
   an
   
   SVN checkout:
 cd debian
 dpkg-buildpackage -rfakeroot
  
  Okay but:
  dpkg-buildpackage: Fehler: Fehler-Exitstatus von Ende von
  debian/changelog war 1
 
 My bad. Do _not_ enter the debian sub-directory. Run
   dpkg-buildpackage -rfakeroot
 directly from the top directory of the sources.
 
 Regards
 Thomas

Perfect, up and running

Regards
Stefan

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Re: [rkward-devel] [rkward-announce] Upcoming release, call for testing RKWard 0.5.6

2011-05-17 Thread Stefan Rödiger
Am Dienstag 17 Mai 2011, 22:21:30 schrieb Thomas Friedrichsmeier:
 On Tuesday 17 May 2011, Stefan Rödiger wrote:
  Is there a deb which you could provide (I still have the messed UI when I
  compile on my machine)
 
 Ubuntu or Debian? For Ubuntu, .debs are at
 https://launchpad.net/~rkward-devel/+archive/rkward-devel or at
 https://launchpad.net/~rkward-devel/+archive/rkward-devel-cran (the latter
 is compiled against the CRAN version of R).
 

Debain/Sid

 For Debian, we do not have an easy way to build snapshot binaries,
 unfortunately. However, you can also build your own .deb directly from an
 SVN checkout:
   cd debian
   dpkg-buildpackage -rfakeroot
 
Okay but:

~/RKWard/trunk/rkward/debian$ dpkg-buildpackage -rfakeroot
dpkg-buildpackage: exportieren von CFLAGS aus dpkg-buildflags (Quelle: 
vendor): -g -O2
dpkg-buildpackage: exportieren von CPPFLAGS aus dpkg-buildflags (Quelle: 
vendor): 
dpkg-buildpackage: exportieren von CXXFLAGS aus dpkg-buildflags (Quelle: 
vendor): -g -O2
dpkg-buildpackage: exportieren von FFLAGS aus dpkg-buildflags (Quelle: 
vendor): -g -O2
dpkg-buildpackage: exportieren von LDFLAGS aus dpkg-buildflags (Quelle: 
vendor): 
tail: „debian/changelog“ kann nicht zum Lesen geöffnet werden: Datei oder 
Verzeichnis nicht gefunden
dpkg-buildpackage: Fehler: Fehler-Exitstatus von Ende von debian/changelog war 
1


 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] JSS FINAL

2010-12-29 Thread Stefan Rödiger
The paper is submitted :)

Regards
Stefan

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Re: [rkward-devel] JSS FINAL

2010-12-28 Thread Stefan Rödiger
 Next (29th 12:00 pm CET) I will send in the paper as PDF to JSS. From what
it's 12:00 am

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Re: [rkward-devel] JSS FINAL

2010-12-27 Thread Stefan Rödiger
On Monday 27 December 2010 04:09:46 Prasenjit Kapat wrote:
 Hi,
 
 On Sun, Dec 26, 2010 at 7:57 PM, Stefan Rödiger stefan_roedi...@gmx.de 
wrote:
  On Sunday 26 December 2010 21:06:34 Thomas Friedrichsmeier wrote:
  Hi!
  
  I'll take another look tomorrow or the day after that. Some comments:
  
  On Sunday 26 December 2010, Stefan Rödiger wrote:
   0) Check for any missing authors guideline. From what I can see we are
   conform the the requirements.
 
 I think we are good. I haven't checked the bib file, though.

This would be a good.

 
   1) I would like to ask everybody which final paragraph of the
   background.tex and which of section Help system you prefer (look for
   the %)?
   you prefer.
  
  I like the style of the non-commented version, but it's not accurate:
  The example session come after the GUI elements, not after the
  technical details. And of course it's the technical details, which will
  be compared, where appropriate.
  
  Okay, I changed/corrected that and took the non-commented version
  (regarding the background.tex).
 
 The latest version (r3327) reads fine.

Okay

 
  I need a vote for the section Help system too.
 
 Well, to me the earlier version seems a bit disconnected. Let others vote
 ;)

granted, :)

 
   2) Please give me feedback which figure are not good readable for you.
 
 I think the figures are fine in terms of their content. But they don't
 seem clear especially the fonts.. I think nothing can be done to
 improve them either - all screen captures will result in this type of
 quality :(
 

There is a bit I can do. I did so for some figures. Basically it means to 
adjust the resolution and not the size of image, which leads to at least a 
better quality on a printout. ... But indeed this is not much.

   3) Check that we use consistent term etc. (for example it's always
   section not
   Section, Figure not Fig. or figure). Other  examples are help
   page vs. help-page or ``Submit button'' vs.  Submit button.
 
 Yes, one thing has been confusing me: when we refer to a menu item or
 a GUI button, our draft is using double quites (``...''). Is that OK?
 For example ``Submit'' button vs Submit button or ``Help'' menu
 vs. Help menu?

Matter of taste in my opinion. Keeping it without quotes means less trouble 
and I can read it better. But let's stick with one. ``Help'' menu would be 
my favourite.

 
   4) If I get it right \proglang{} is only for languages (XML, HTML, R,
   C++, Qt, ECMAScript, ...) not for programs like Red-R or RKWard (see
   5)).
  
  Yes, but it does not appear to be clear-cut. Citing from jss.dtx:
  % This should be used for typesetting the names of programming
  % languages, e.g., |\proglang{Java}|, |\proglang{C++}| or
  |\proglang{R}|. % This applies also to programmable environments which
  also have a GUI % like |\proglang{SAS}|, |\proglang{Stata}| or
  |\proglang{S-PLUS}|.
  
  Programmable environments could certainly be stretched to include KDE,
  but also Red-R, and RKWard. Still I guess it's best to restrict it as
  you suggest.
  
  Okay, we keep it without anything. We keep \proglang{KDE} but stick with
  Red-R and RKWard.
  
   5) Do you wish to emphasise words  like RKWard, TDI?
  
  We certainly shouldn't emphasise all technical terms like TDI. We might
  emphasise RKWard (see above), but I'd leave it as is, for now. If the
  editors want that, it will be easy to revise.
  
  Same opinion here. I just had the impression that some co-authors prefer
  it emphasised.
  
   6) Does anybody see a need to add something to Conclusion and Outlook?
   If so when do you plan to finish it?
  
  I don't plan to add anything.
  
  Okay. Same for me.
 
 I'll take a look at them tonight.

okay

Another point. We all consent to use AE not BE, right? I checked and all is 
correct from what I saw. 

 
   Generally:
   * 31.12 is the official deadline. I would like to sent it earlier (29.
   or 30. in case the editors need something else).
  
  Yes. I propose to target the 29th, meaning the 28th will be the last day
  to make any changes. Of course if there is a good reason to add another
  day, we can still do that.
  
  Okay. Let's stick with it. Official target is the 28th with the 29th as
  buffer.
  
  Regards
  Thomas
  
  Regards
  Stefan
  
  Side note:  The weather is quite unpredictable and I have to use a surf
  stick currently ... . In case you don't see a I submitted message from
  me on the list (latest 30th evening) somebody else shouldn't hesitate to
  submit. Who wants to be the backup? To make it clear I intend to
  submit the paper as we discussed before (unless there is a unforeseeable
  reason). I would just like to be on the safe side.
 
 If Thomas can, that'll be the best. If not, I can. We just have to
 send the pdf file via email, right?

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Re: [rkward-devel] JSS FINAL

2010-12-27 Thread Stefan Rödiger
On Monday 27 December 2010 15:40:21 Thomas Friedrichsmeier wrote:
 Hi,
 
 On Monday 27 December 2010, Stefan Rödiger wrote:
  On Sunday 26 December 2010 21:06:34 Thomas Friedrichsmeier wrote:
   I'll take another look tomorrow or the day after that. Some comments:
 ok, first half is committed, second half will follow, later.
 
 Most of my edits are formatting or minor editing, but at some places I also
 removed a sentence or two which I found redundant. Where I did, I've added
 comments in the .tex files.

Okay

 
 Some more comments / answers:
  I need a vote for the section Help system too.
 
 I like the non-commented version better, too, but I've edited it some more.

Good. This will make somebody happy.

 
2) Please give me feedback which figure are not good readable for
you.
  
  Can I take no comment for the moment being as accepted?
 
 I did look at a printout so far. But as Prasenjit said, there's only so
 much that can be done for the print quality of a screenshot.
 

Okay

 Two other things that I've stumbled across:
 - Section 3.5 refers to Figure 8 many pages ahead. I think it should get a
 separate screenshot, resembling 8A, but with no filename entered, yet.

Okay, I will add a new one.

 - In Figure 2, I suggest to extend area D to include the tool buttons
 (consistent with area B, and with the text), and correspondingly to limit
 area E to the status bar.

I take care of this and submit it within the next few hours.

 
  Side note:  The weather is quite unpredictable and I have to use a surf
  stick currently ... . In case you don't see a I submitted message from
  me on the list (latest 30th evening) somebody else shouldn't hesitate to
  submit. Who wants to be the backup? To make it clear I intend to submit
  the paper as we discussed before (unless there is a unforeseeable
  reason). I would just like to be on the safe side.
 
 Ok, I can be your backup. Let's put the deadline for your message at 20:00
 German time on the 30th, then. This will give me a chance to submit in the
 evening of the 30th - if I have to.

Okay. That's perfect. But I guess everything will be smoothly.

 
 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] JSS FINAL

2010-12-27 Thread Stefan Rödiger
On Monday 27 December 2010 15:40:21 Thomas Friedrichsmeier wrote:
 Hi,
 
 On Monday 27 December 2010, Stefan Rödiger wrote:
  On Sunday 26 December 2010 21:06:34 Thomas Friedrichsmeier wrote:
   I'll take another look tomorrow or the day after that. Some comments:
 ok, first half is committed, second half will follow, later.
 
 Most of my edits are formatting or minor editing, but at some places I also
 removed a sentence or two which I found redundant. Where I did, I've added
 comments in the .tex files.

I plan to remove to comments completely at the end. Most of them are corrected 
and out. Some comments are still there. ...

 
 Some more comments / answers:
  I need a vote for the section Help system too.
 
 I like the non-commented version better, too, but I've edited it some more.
 
2) Please give me feedback which figure are not good readable for
you.
  
  Can I take no comment for the moment being as accepted?
 
 I did look at a printout so far. But as Prasenjit said, there's only so
 much that can be done for the print quality of a screenshot.
 
 Two other things that I've stumbled across:
 - Section 3.5 refers to Figure 8 many pages ahead. I think it should get a
 separate screenshot, resembling 8A, but with no filename entered, yet.

Done. I added the code window and some legend text too. Any wishes on that?

 - In Figure 2, I suggest to extend area D to include the tool buttons
 (consistent with area B, and with the text), and correspondingly to limit
 area E to the status bar.

Done in the latest commit. Does it need further changes? I added thin white 
lines between the black lines to get maximum contrast. If you edit the figure 
please take care of this.

 
  Side note:  The weather is quite unpredictable and I have to use a surf
  stick currently ... . In case you don't see a I submitted message from
  me on the list (latest 30th evening) somebody else shouldn't hesitate to
  submit. Who wants to be the backup? To make it clear I intend to submit
  the paper as we discussed before (unless there is a unforeseeable
  reason). I would just like to be on the safe side.
 
 Ok, I can be your backup. Let's put the deadline for your message at 20:00
 German time on the 30th, then. This will give me a chance to submit in the
 evening of the 30th - if I have to.
 
 Regards
 Thomas

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Re: [rkward-devel] JSS FINAL

2010-12-27 Thread Stefan Rödiger
On Monday 27 December 2010 20:10:47 Thomas Friedrichsmeier wrote:
 On Monday 27 December 2010, Stefan Rödiger wrote:
  Done. I added the code window and some legend text too. Any wishes on
  that?
 
 Yes ;-) svn add it.
 
 Regards
 Thomas
Done
Stefan

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[rkward-devel] JSS FINAL

2010-12-26 Thread Stefan Rödiger
Hi
0) Check for any missing authors guideline. From what I can see we are conform 
the the requirements.
1) I would like to ask everybody which final paragraph of the background.tex 
and which of section Help system you prefer (look for the %)?
you prefer.
2) Please give me feedback which figure are not good readable for you.
3) Check that we use consistent term etc. (for example it's always section 
not 
Section, Figure not Fig. or figure). Other  examples are help page 
vs. help-page or ``Submit button'' vs.  Submit button. 
4) If I get it right \proglang{} is only for languages (XML, HTML, R, C++, Qt, 
ECMAScript, ...) not for programs like Red-R or RKWard (see 5)).
5) Do you wish to emphasise words  like RKWard, TDI?
6) Does anybody see a need to add something to Conclusion and Outlook? If so 
when do you plan to finish it?

Generally:
* 31.12 is the official deadline. I would like to sent it earlier (29. or 30. 
in case the editors need something else).

Regards
Stefan




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Re: [rkward-devel] JSS FINAL

2010-12-26 Thread Stefan Rödiger
On Sunday 26 December 2010 21:06:34 Thomas Friedrichsmeier wrote:
 Hi!
 
 I'll take another look tomorrow or the day after that. Some comments:
 
 On Sunday 26 December 2010, Stefan Rödiger wrote:
  0) Check for any missing authors guideline. From what I can see we are
  conform the the requirements.
  1) I would like to ask everybody which final paragraph of the
  background.tex and which of section Help system you prefer (look for
  the %)?
  you prefer.
 
 I like the style of the non-commented version, but it's not accurate: The
 example session come after the GUI elements, not after the technical
 details. And of course it's the technical details, which will be compared,
 where appropriate.

Okay, I changed/corrected that and took the non-commented version (regarding 
the background.tex).

I need a vote for the section Help system too.
 
  2) Please give me feedback which figure are not good readable for you.

Can I take no comment for the moment being as accepted? 

  3) Check that we use consistent term etc. (for example it's always
  section not
  Section, Figure not Fig. or figure). Other  examples are help
  page vs. help-page or ``Submit button'' vs.  Submit button.
 
 I'm fairly certain that it should be Section x.y, not section x.y (but
 lowercase when writing section without a number: in this section / in
 the next section). See the examples in http://www.jstatsoft.org/style.
 It's also what the APA-styleguide says (for whatever that is worth in this
 context).

Okay, I took care of this.

 
  4) If I get it right \proglang{} is only for languages (XML, HTML, R,
  C++, Qt, ECMAScript, ...) not for programs like Red-R or RKWard (see
  5)).
 
 Yes, but it does not appear to be clear-cut. Citing from jss.dtx:
 % This should be used for typesetting the names of programming
 % languages, e.g., |\proglang{Java}|, |\proglang{C++}| or |\proglang{R}|.
 % This applies also to programmable environments which also have a GUI
 % like |\proglang{SAS}|, |\proglang{Stata}| or |\proglang{S-PLUS}|.
 
 Programmable environments could certainly be stretched to include KDE, but
 also Red-R, and RKWard. Still I guess it's best to restrict it as you
 suggest.
 
Okay, we keep it without anything. We keep \proglang{KDE} but stick with Red-R 
and RKWard. 

  5) Do you wish to emphasise words  like RKWard, TDI?
 
 We certainly shouldn't emphasise all technical terms like TDI. We might
 emphasise RKWard (see above), but I'd leave it as is, for now. If the
 editors want that, it will be easy to revise.
 

Same opinion here. I just had the impression that some co-authors prefer it 
emphasised.

  6) Does anybody see a need to add something to Conclusion and Outlook? If
  so when do you plan to finish it?
 
 I don't plan to add anything.

Okay. Same for me.
 
  Generally:
  * 31.12 is the official deadline. I would like to sent it earlier (29. or
  30. in case the editors need something else).
 
 Yes. I propose to target the 29th, meaning the 28th will be the last day to
 make any changes. Of course if there is a good reason to add another day,
 we can still do that.
 

Okay. Let's stick with it. Official target is the 28th with the 29th as 
buffer.


 Regards
 Thomas

Regards
Stefan

Side note:  The weather is quite unpredictable and I have to use a surf stick 
currently ... . In case you don't see a I submitted message from me on the 
list (latest 30th evening) somebody else shouldn't hesitate to submit. Who 
wants to be the backup? To make it clear I intend to submit the paper as we 
discussed before (unless there is a unforeseeable reason). I would just like 
to be on the safe side. 

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Re: [rkward-devel] JSS paper round 3

2010-12-25 Thread Stefan Rödiger
Hi,
currently I'm merging the corrections (mine, Meiks, Thomas) which came in since 
23.12.. I can't upload them yet but will do so in a couple of days.

Regards
Stefan
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Re: [rkward-devel] JSS paper round 3

2010-12-23 Thread Stefan Rödiger

 Original-Nachricht 
 Datum: 23 Dec 2010 13:04:34 +0100
 Von: Thomas Friedrichsmeier thomas.friedrichsme...@ruhr-uni-bochum.de
 An: rkward-devel@lists.sourceforge.net
 Betreff: Re: [rkward-devel] JSS paper round 3

 Hi,
 
 On Thursday 23 December 2010, Stefan Rödiger wrote:
  Thomas will you or should I sent it to the JSS? I guess it is my task.
 
 yes, I think that's the task of the first author ;-). 

Okay

Remember to keep the
 list 
 in CC.

Gosh, everytime I use answer instead of answer all. Sorry for that.

 
 Regards
 Thomas

Regards
Stefan

BTW, I just started to read the paper as print out. Looks nice and reads good 
IMHO. There is a lot of minor stuff to correct. So far I found at least two 
issues on every page.


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Re: [rkward-devel] JSS paper round 3

2010-12-22 Thread Stefan Rödiger
On Tuesday 21 December 2010 17:15:58 Thomas Friedrichsmeier wrote:
 Hi!
 
 Stefan: I'll go ahead and give a new status summary and call for feedback
 in your stead. I'm a bit concerned that we'll be entering the holiday
 season, all too soon.

Hi,

thanks.

 
 --
 
 Just a short reminder that deadline for the JSS-article is drawing near.
 This is no reason to panic, as I think we are in pretty good shape, the
 article is essentially complete, and it is converted to .tex, now. But of
 course there are still some rough edges, and so please take a look and
 give your feedback.
 
 Some items to look out for (Stefan, perhaps you have some more?):

From my point of view the content is complete too. I'll no longer add from my 
side. Anybody else is of course free to do so.
I have no other items. Just polishing polishing ... 

 - Spelling, grammar, and language, naturally.

started, but needs indeed more help

 - Formatting and typesetting. We're working on the final version, now, so
 now is the time to start looking for formalities.

started, but needs also more help.

 - The conclusion section needs more eyes.
 - Meik and Prasenjit, please add your affiliation(s), if any.
 - Anything else you find.
 
 I guess for anything that you do not expect to be terribly controversial,
 it's best to do your changes direclty in SVN (if you have access). Please
 try to do your changes as soon as possible, so others have the time to
 react.
 
 Meik, and Prasenjit, will you have the time for another round of editing?
 When? Are you going to be reachable by E-Mail until year-end? Personally, I
 will be reachable by E-Mail, but not necessarily on the same day.
 

I'll try to be as often online as I can but there will be interruption.

Thomas will you or should I sent it to the JSS? I guess it is my task.

 Regards
 Thomas

Regards
Stefan

P.S.: Thanks so far to all who have contributed to this paper and RKWard. If 
we get accepted it will be something to be proud of in my humble opinion.

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Re: [rkward-devel] JSS paper, round 2

2010-12-05 Thread Stefan Rödiger
On Sunday 05 December 2010 20:17:47 Thomas Friedrichsmeier wrote:
 Hi,
 
 On Sunday 05 December 2010, Prasenjit Kapat wrote:
  Finally, I have my version in svn. It is in the
  commented_version/_pk.odt. I've mainly added few lines on the plot
  history feature and edited a few things here and there, nothing major.
 
 I haven't looked at your version, yet, but a few answers to your questions:
  On first impression, this seems like a long draft. I have not seen any
  of the JSS papers. Any idea, how long these papers are typically?
 
 Our draft is quite long, and I wouldn't be too surprised, if reviewers will
 tell us to reduce this a bit. However, looking at a couple of the recent
 papers (http://www.jstatsoft.org/v37) we don't seem to be completely off
 limits. Of course the question of what exactly the editors expect an
 article for the R GUIs special issue to look like is a good question.

There is no page limit. (http://www.jstatsoft.org/instructions)

 
  Do they allow color figures? Some journals ask the authors to pay for
  them.
 
 For all I know, there is no printed version of the JSS at all, so this
 should not be an issue. Other articles do have color figures.

True. Color is just fine.

 
  Do they allow footnotes?
 
 I can't find any statement on footnotes, but other articles do have
 footnotes.

They do and use them.

 
  I am not sure how Stefan is planning, but we may need to create a tex
  version once we reach a stable enough draft to get a better idea of
  the length and format.
 
 Well, the deadline for submission is December, 31st. So I guess we should
 aim to have a stable draft (i.e. complete content) next weekend, and start
 to focus on the conversion to tex and the fine points (spelling, language,
 style, etc.) directly after. Stefan, do you have a tentative schedule?

That's is fine. As stated before we have no real page limit (but we shouldn't 
make it an endless story anyways). The stile for the literature and paper 
layout is defined by JSS. I hope the transition to tex works as well.

Content wise the code example is missing mainly. We will use the t-test. The 
other stuff is at least started.

Some aspects will be dropped. Package-management just lost it figures and if I 
remember correctly Thomas you rather opted to omit the section completely.

@all: Is there anything else that is not needed from your point of view?

We go for the schedule as Thomas pointed out.
- Finish content / this week (next week a bit)
- Redo German figures (figures will be settled to 8.4 or 16.8 cm in width)
- remove duplicate information or sections which not seem to fit in /  this 
week 
- Reorder sections / end of this week
- Add citations properly / This week and next week

Regarding spelling, language and some content we have another author yet to 
announce who will help us.

 
 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] JSS paper, round 2

2010-12-03 Thread Stefan Rödiger
On Thursday 02 December 2010 13:28:15 Thomas Friedrichsmeier wrote:
 Hi,
 
 On Wednesday 01 December 2010, Prasenjit Kapat wrote:
  2010/12/1 meik michalke meik.micha...@uni-duesseldorf.de:
   i'll have some time to spend this weekend and could write something
   (7.1  7.2). if that's early enough and someone can give me a vague
   estimate of how elaborate this should be in the end (in lines), i'll
   do it.
 
 The main idea of this section is to give a sort of hands-on impression of
 what a typical RKWard session looks like. This is in contrast to the
 Using RKWard chapter, which tries to cover most aspects of the GUI, even
 though many of those are fairly specialized.
 
 I think this section should be fairly short. Something like 2-4 screenshots
 with at most 30-40 lines of text.
 
  busy schedule on my end as well (trying to finish up soon) .. i'll try
  to devote some time on this weekend as well...
  
  which is the latest version, btw? (sorry haven't been following the
  discussions lately). i can see couple of fils in the
  commented_version dir and one in the master_version.
 
 The latest version in SVN is commented_versions/rkward_jss_thomas.odt . The
 master_version is outdated.
 

I will add the latest version in a couple of seconds.

 Keep in mind that we still intend to change the order of the chapters (most
 importantly switching Technical Design and Using RKWard, but probably
 also re-ordering the sub-chapters of Using RKWard). Stefan: Do you have
 the time to do that before the weekend?

@Thomas: I did not yet reorder it. Either you do it or we definitely do it 
next week. I'm not on-line over the weekend.
I think we should still focus on content.

For the others: Please put your content where you think it matches best.
The example for How to code a plugin we be the T-test therefore not need to 
do something there. 

 
 Regards
 Thomas

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Re: [rkward-devel] JSS paper, round 2

2010-11-26 Thread Stefan Rödiger
Hi Thomas,

the HTML reference list is more less up to date. We keep it for the moment 
being. I plan to use jabref for a bibtex reference. If you want you can create 
a bibtex file with an unique identifier for each of your new entries. I'll 
take care of the remaining.

JSS gives information about the references which we should use from now on. 
http://www.jstatsoft.org/style#q5

Regards
Stefan

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Re: [rkward-devel] JSS paper, round 2

2010-11-15 Thread Stefan Rödiger
Am Montag 15 November 2010, 17:12:54 schrieb Thomas Friedrichsmeier:
 Hi,
...
 
 I've also edited liberally, shortened, here, extended there, and moved
 sentences around. All in all this makes the change-tracking *look* as if I
 had changed just about anything about this chapter. While this is not
 quite true, I do wonder, how to proceed from this, best, since it will
 probably make merging other people's changes quite a feat.
 

That's all fine. I use to work with such tools lately. Indeed usually it looks 
horrible but so what. :)
As long as people focus on sections it will work easily otherwise it will be 
though indeed. But this is the best we have right now.

 Stefan, ideally, *if* you have the time right now, I think it would be
 good, if you could go through my changes, accept the ones you like, and
 upload a new version, for everybody else to work with.
 

Will do so within the next minutes.

 Failing that, but hoping you have *some* time, at the moment, perhaps you
 can still skim through the changes to make sure you are ok with the
 general direction of my changes. Then others can base their edits /
 comments on my version, and we can sort out any fine points that you do
 not agree with, later.

All fine. As discussed, some figures are out (Google data, localisation, 
etc.). I accepted most of your changes. Besides that I corrected some minor 
errors and so on.

@ all: I didn't take time (intentionally) to read every single changed or 
existing line. We will fix errors next. Don't bother with missing words or 
grammar. Now the focus is still on structure and content. The same applies to 
the figures. Please make clear (by comment or so) which figures are useful or 
what is missing from your point of view. Generally one should grasp the 
meaning even though they are in German (will be English finally).

 
 Failing that, it's probably still a good idea for the rest of you to take
 my version as a base for your comments / edits, as it's also a bit more
 complete.

Everybody is open to do so with the new version.

Regards
Stefan

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Re: [rkward-devel] RKWard on Windows

2010-11-04 Thread Stefan Rödiger
Am Samstag 30 Oktober 2010, 13:54:23 schrieb Thomas Friedrichsmeier:
 Hi,
 
  during the last days I worked with RKWard on Windows (XP). I did the
  custom install (not the bundle). Every thing is working basically fine,
  no crashes or such. The only thing I did not get to work so far is
  package management (package update and installation ...). Rgui didn't
  work in the first place too but it seems that the --internet2 flag did
  the trick thus no problems with that any longer. Is there anything to
  consider for RKWard regarding such issues?
 
 not that I know of, and it works fine on my WindowsXP. This answer in the R
 windows FAQ seems to indicate that it's a known, but not really understood
 problem in R:
 http://cran.r-project.org/bin/windows/base/rw-FAQ.html#The-Internet-downloa
 d- functions-fail_002e
 I don't know whether there is any sensible way for us to work around this.
 Let me know, if you have an idea.

My current work around is to do all my installing and updating of packages via 
Rgui. As stated before after the fresh R 2.12 installation where I set the --
internet2 flag everything was working in the Rgui but still not in RKWard. 
That's all I can say to it. Sorry.

 
  Moreover I used to work with R.2.11 but switched to R2.12 today which
  resulted in a non starting RKWard. I did a reinstallation of RKWard and
  pointed to the new location of R. I did not check if the is a config file
  which can be changed if need or such. My point is that this might be a
  minor problem for average users. ...
 
 I can see your point, but once again, I can't think of a solution. There
 can be an arbitrary number of independent R installations on one system,
 and these do not even need to be in the registry. RKWard needs to know
 which one to use. The config file for that is rkward.bat itself.
 Modifying the location of the R-executable, there, would have done the
 trick in your case.

Okay, I assumed this. That's a valuable information we can put in the RKWard 
help to make the information available without digging through the list. I 
suggest we put it in the trouble shooting section. 

 
 Currently RKWard 0.5.4 compiled with any version of R between 2.9.x and
 2.12.x should work with any of these versions of R at runtime. But
 sometimes there are incompatibilities, and for instance RKWard 0.5.4
 compiled with R 2.8.x cannot be used with R 2.9.x or above. Also, quite
 often, you need the latest version of RKWard in order to run the latest
 version of R. For instance, RKWard 0.5.3 cannot run any user command in
 the R Console with R = 2.12.x.
 
 So, I think the only safe assumption is that for a new installation of R,
 you will have to install the most recent version of RKWard. I don't see a
 good way to improve on that situation.

Well I think that's okay for the average user. As long such information is 
available no-one will have trouble to install the tiny RKWard binary.

 
 One thing that we *can* improve is the case that the old R installation no
 longer exists. We'd simply need a check for that in rkward.bat, and then
 display a helpful message. Any volunteer for some Windows batchfile
 scripting?
 
 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] RKWard on Windows

2010-11-04 Thread Stefan Rödiger
Am Freitag 29 Oktober 2010, 16:51:17 schrieb Prasenjit Kapat:
 Hi Stefan,
 
 On Thu, Oct 28, 2010 at 3:53 PM, Stefan Rödiger stefan_roedi...@gmx.de 
wrote:
  Moreover I used to work with R.2.11 but switched to R2.12 today which
  resulted in a non starting RKWard. I did a reinstallation of RKWard and
  pointed to the new location of R. I did not check if the is a config
  file which can be changed if need or such. My point is that this might
  be a minor problem for average users. ...
 
 I am surprised that rkward compiled w/ R 2.11 works with R 2.12 by
 just changing the location of R.
 

Well yes, at least here. I run the RKWard binary again and when asked for the 
location of R I pointed to R 2.12. That was all needed to be done.

 Anyway, I've been trying to setup a build environment on Windows.. I
 was hoping to compile against R 2.12.. I am not able to spent much
 time.. I'll look into this again over the weekend.
 
 Thanks,

Regards
Stefan


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Re: [rkward-devel] Potential Data editor bug

2010-09-23 Thread Stefan Rödiger
Am Dienstag 21 September 2010, 16:52:04 schrieb Thomas Friedrichsmeier:
 Hi,
 
 On Sunday 19 September 2010, Prasenjit Kapat wrote:
  As a caution to the user: Should a warning be displayed when the data
  editor encounters multiple columns with same name? Noting that, the
  data itself is not lost, it is just not displayed and hence not safe
  to be edited! (Or is it safe anyways?)
 
 ok, current SVN version should no longer crash on this object. A warning
 should be displayed, and the table set to read-only mode. Please test.
 

Confirmed. It's (opening and warning) working reliably.

What is the rational to set it to read-only mode? I mean giving a warning and 
leaving the user in this mode might be a bit confusing. In a future version it 
might be nice to have an option in the dialogue to change the mode. Something 
like okay I know and don't want to edit it and okay I know and want to edit 
it right now.

Regards
Stefan

 It should be mostly, but not entirely safe to edit such objects. If you
 edit a cell in one of the duplicate columns, all columns with the same
 name will be affected in the backend. However, in the editor, this will
 not become visible until you close and re-open the editor.


 Regards
 Thomas


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Re: [rkward-devel] Bookmark toolbar / Favourits

2010-09-23 Thread Stefan Rödiger
Am Dienstag 21 September 2010, 16:54:54 schrieb Thomas Friedrichsmeier:
 Hi!
 
 On Tuesday 21 September 2010, Stefan Rödiger wrote:
  lately I was wondering if it would be of general interests to implement a
  bookmark/favorites toolbar in RKWard for example as known from Konqueror
  (allows even searching for a term). I run frequently the same scripts,
  text files etc. and use them as template or just as is. Since most of
  them are located in different places (or even removable devices) is
  sometimes distracting to search for them. I guess that I'm not the only
  one doing it this way.
  
  Would be a nice enhancement imho.
 
 Yes, this really sounds like very useful addition. Would you add it to the
 feature request tracker?
 
 Regards
 Thomas

okay. Yes.
Regards
Stefan

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Re: [rkward-devel] Request for feedback on new plugin features, and plot history

2010-09-23 Thread Stefan Rödiger
Am Dienstag 03 August 2010, 13:55:39 schrieb Thomas Friedrichsmeier:
 Hi,
 
 I had meant to write this mail much earlier, but never found the time: The
 current development version has some new features which we need feedback
 on. You can get it from SVN as usual, but if you're running Ubuntu or
 openSUSE, you can also find compiled packages at
 https://launchpad.net/~rkward- devel/+archive/rkward-devel and
 https://build.opensuse.org/project/show?project=home%3Atfry-suse%3Arkward-
 devel , respectively.
 
 --
 
 The first area that needs some testing and feeback is the plot history
 feature which Prasenjit has added to the graphics windows. Basically,
 please create a few plots in one or more windows, try the toolbar buttons,
 and comment on any aspect that is not intuitive, or buggy. Prasenjit, if
 you have a bit of time, could you summarize the remaining questions,
 again?
 

I used the plot history (svn). So far I have no problem to understand or use 
it. There were no crashes, toolbar button and so on worked reliably and 
intuitive. 

 --
 
 The second area that I would like to pick your brains about is some new
 plugin features. Perhaps you recall this short thread on how to deal with
 plugins that do data.frame specific transformations: http://www.mail-
 archive.com/rkward-devel@lists.sourceforge.net/msg00779.html . The
 development snapshots have some variants of a solution for that. To try
 it, frist make sure that the under_development.pluginmap is activated
 under Settings-
 
 Configure RKWard-Plugins.
 
 You should see a new top-level menu called Data. In this, there are two
 variants of a Sort data plugin, and you will want to try each
 a) while you are editing a data.frame, and the data.frame is the active
 window and
 b) while any other window is active.
 As you will see, in case b), both plugins will seem identical. In case a),
 the active data.frame is preselected in both plugins, but the first
 variant still allows to select a different data.frame to sort.
 
 Key questions on that:
 - Which variant of the plugin is preferrable?
 - Do you think it is intuitively clear, when a data.frame is active?
 Suggestions for improving this?
 

I have no preference. Both are fine for me.
So far I had no real world scenario to make use of them and thus no suggestion 
or objections.

 You may also want to look at the Generate random data plugin. Here, when
 a data.frame is active, the generated data will be added to that
 data.frame by default. When no data.frame is active, the generated data
 will be added to the .GlobalEnv by default. In both cases, the
 saveobject-element at the bottom allows to select a different place to
 save to (which is new, as well).
 
Nice too. Again, I had no real world scenario to make use of it and thus no 
suggestion or objections other than to state it works.

 Finally, plugin developers will be interested in taking a look at the
 technical side of these plugins. The code for them can to be found in
 plugins/data. You will see note two things:
 - The active object (currently data.frames, only) is available from a
 property called current_object. If no object is active, this is an empty
 string. - There is a script-block, which allows scripting of the dialog
 itself, instead of the generated code. Here, it is mainly used to check
 whether or not the selected object is a data.frame. I hope you can figure
 out the meaning of the code in the script-block yourself, and if you
 can't, that probably means I need to change things.
 
 One further plugin to show some more possibilities of plugin scripting is
 in Analysis/QtScript Test 1 (code is in plugins/tests). I suppose this
 will be particularly interesting to Meik, who has been asking for similar
 functionality in the past. Please let me know what you think (since this is
 totally undocumented ATM, you may want to take a look at
 scriptbackends/rkcompnentscripting.js as a reference of implemented
 functionality).
 
 Well, take your time, we don't need to rush decisions on any of this, but
 it would be cool, if you could take a look at these new features, and
 share your thoughts.
 
 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] Potential Data editor bug

2010-09-16 Thread Stefan Rödiger
Am Donnerstag 16 September 2010, 17:14:49 schrieb Prasenjit Kapat:
 On Thu, Sep 16, 2010 at 8:22 AM, Stefan Rödiger
 
 stefan_roedi...@gmx.de wrote:
  Hi,
  
  I have two files attached. First is called procedure.txt with the
  description how to preduce the potential bug. And there is also the gdb
  message. I was able to reproduce the crash of RKWard multiple times by
  doing this.
 
 Confirmed.
 
 But if you use mydata instead of data as the data.frame variable
 then the crash does not occur. I guess the data editor is trying to
 edit utils::data as opposed to .GlobalEnv::data?
 
 Regards,

Well yes good point. But do the same procedure with:

a-rnorm(100)
b-rnorm(100)
data-data.frame(a,b)
names(data)-c(a,b)

then lets say fix(data) ... nothing will happen or open data from workspace 
browser (as in my previous example) and nothing will happen. Shouldn't the 
same thing happen?

BTW, as you might consent the lines attached in my example are not a good 
example how to work with R (size and arrangement of data ...). Thus it was 
really interesting for me to see what happens ... .

Regards
Stefan

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Re: [rkward-devel] plot history: 3rd attempt: request for feedback

2010-09-11 Thread Stefan Rödiger
Am Freitag 10 September 2010, 21:27:14 schrieb Prasenjit Kapat:
 Hi,
 
 I've just committed another attempt at the plot history feature(s).
 Please test it. Some notes follow:
 
 1. Implemented action:
 1a. first / prev / next / last
 1b. Remove plot
 1c. Forcefully append plot, irrespective of its status and type
 1d. Clear history
 1e. Drop down menu
 Insert and Overwrite actions haven't been implemented and I do not
 intend them for this release.
 
 2. par (mfrow/mfcol) and split.screen have been accounted for, almost!
 
 3. Although there is limit on the size of individual plots, one
 crossing that limit the user is now presented with an option to save
 or ignore this over-sized plot... This way, such plot are not lost.
 
 4. As usual, play around with the icons / menus and make sure the
 behavior is _NOT_ harmful and less confusing. Stuff to try out:
 
 . open multiple new (empty) devices
 . add plots using regular plot calls
 . update plots using title (), grid () etc...
 . duplicate device (with saved and unsaved plots)
 . remove plots
 . browse using the arrow buttons
 . browse using the drop down menu and make sure that the order /
 indices are not screwed up
 . close device (with saved / unsaved / _no_ plot)
 . perform actions on inactive device and make sure that the state of
 the device does not change
 . perform actions on _one_ device and make sure the display on other
 devices are not changed
 . exceed the hist limit
 . reduce the hist limit from Settings  RKWard  Output to something
 below the current hist length
 . plot large sized plots (for ease of use, you may reduce the plot
 size in settings)
 . call par (mfrow = ...) or split.screen (...). It is _not perfect_
 but see if is satisfactory..
 . if you use lattice then mix lattice and standard calls...
 . for lattice: try out update (trellis.last.object (), ...) calls
 . try preview devices.. they should not be tracked at all
 
 
 5. And MOST importantly, find plotting functions which does not get
 recorded (technically, ones that do not call plot.new or persp or
 print.trellis). In such cases (even otherwise) try using the Append
 plot action.
 
 6. By default all debug output is turned off. If you are so inclined
 to see (esp on error) call:
 
 rk.record.plot$.set.rk.rp.debug (TRUE) # FALSE to turn off
 
 This will create a whole lot of messages.
 
 7. The label strings for the drop down menu are by default restricted
 to 50 characters. If you need to change it, call:
 
 rk.record.plot$.set.call.lab.len (60) # or 20 ...
 
 See how the it fares on different screen sizes.
 
 8. Summary of all the saved plots (not of the devices) can be found by:
 
 rk.record.plot$getSavedPlotsSummary () # this is data.frame
 
 9. Summary of the managed devices can be found by:
 
rk.record.plot$getDevSummary () # but this needs debug to be TRUE
 
 Of course, there are a lot debug commands, although no output is
 produced, which will be removed once the performance is acceptable.
 
 Regards,

Great I will uppdate, test and report.

Regaqrds
Stefan

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Re: [rkward-devel] Request for feedback on plot history

2010-09-06 Thread Stefan Rödiger
Am Montag 06 September 2010, 13:10:26 schrieb Thomas Friedrichsmeier:
 Hi,
 
 On Monday 06 September 2010, Stefan Rödiger wrote:
  The dropdown menu (What next? c) would be really helpful. Indicating
  the number of the plot and the fist bit of the commands used would be
  sufficient for me. Something like:
  
  1   plot(rnorm(...
  2   hist(data...
  ...
 
 I've added a drop-down menu (Prasenjit, I hope I did not get into your way
 with this; the changes in public_graphics.R are fairly straightforward,
 though). Of course for normal (non lattice) plots, showing the plot
 command is probably impossible, technically.
 
 This is still buggy when you are navigating from a yet unsaved plot to a
 different position, when the history is already filled to the maximum
 length. It should be possible to fix this, but since it probably needs to
 make some assumptions about the internals of the implementation, I thought
 I rather wait for the next version before bothering with this.
 

Worked fine for me. I had no crashes when I was doing some boxplots, jumping 
between them, ... . I changed the default the settings (8 instead of 20) plot 
history entries out of curiosity what might happen. Even that worked with the 
notification that some plots need to be removed when I apply the new settings.

  But I wonder how do you deal with multiple opened windows? All have one
  history or each has an individual?
 
 All windows share a single history, currently. This has some advantages
 (most importantly, the plot history persists after closing the device
 windwow!), but it's also the root cause of most of the headaches which
 Prasenjit and I have been discussing the past few days.
 

Okay.

 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] Request for feedback on plot history

2010-09-05 Thread Stefan Rödiger
Am Dienstag 31 August 2010, 03:43:57 schrieb Prasenjit Kapat:
 Hi,
 
 Following this thread from Thomas:
 http://www.mail-archive.com/rkward-devel@lists.sourceforge.net/msg00872.htm
 l
 
 I would like to get some feedbacks, especially bugs.

I used the latest SVN and found no bugs (I use the feature relative 
intensively during my work).

Handling is overall intuitive IMHO. However, for a moment I didn't grasp the 
idea of the Activate button which turned out to be genial when I saw the 
screen cast. Definitely a Won't miss it.
Everything else stated hereafter applies to for future versions as you stated 
yourself. 

To my pleasant surprise it works (move through history, remove elements, ...) 
without problems with split.screen() too. But trouble here is that I find it 
hard to tell which window is open without calling Plot properties manually 
(this issue would be addressed in future versions for non-splitted windows if 
I understand you right). Either Plot properties get a more prominent position 
(persistent status bar as you suggested) or you could establish some kind of 
visual feedback (see below Visual feedback, or other active GUI elements of 
RKWard have a read square  for example) in future version. But this has no 
priority in my opinion.

One thing I find a bit distracting is the output presented in the console and 
command-log when a plot is invoked (example output attached). This is an issue 
for me since I use to work on a 10 inch netbook from time to time and 
therefore need to scroll more than I used to.
 
 Here is a screenshot of the new screen device window:
 http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Screenshots#Gr
 aphics_history_actions_.28from_trunk.29
 
 And here is a screencast (download the ogv file from here; could not
 upload it to any of the video sites):
 http://www.mediafire.com/?z3gp737xa5h1t
 (Meik: see [1] below)
 

That helped to understand

 Quoting Thomas:
 Basically, please create a few plots in one or more windows, try the
 toolbar buttons, and comment on any aspect that is not intuitive, or
 buggy.
 

stated above

 Some notes:
 
 1. Settings  Configure RKWard  Output has settings for the history
 length and size
 

Found it finally after this hint. I which there was a help button as in the 
plug-ins. Even in the current stat the plot history is quite powerful and some 
easy accessible documentation -as users of plug-ins might be used to- would be 
highly appreciated.

 2. The arrow icons are self explanatory. Note that: if there is any
 new plot on the current device then it will be appended to the
 history before moving away.

Works excellent.

Suggestions:
More visual feedback. I would like to see some information in the plot window. 
Something like (Plot 12, active window 3). I'm aware that Plot properties 
provides this information too and that you plan this for future versions. My 
suggestion, however is to show this information in the plot when scrolling 
through the plot history.

The dropdown menu (What next? c) would be really helpful. Indicating the 
number of the plot and the fist bit of the commands used would be sufficient 
for me. Something like:

1   plot(rnorm(...
2   hist(data...
...

This would help to keep track. It would also support the work when removing a 
plot from the history.
But I wonder how do you deal with multiple opened windows? All have one 
history or each has an individual? 

 
 3. The Add to history (+) button will be confusing. For modified
 (using points () or lines () or ...) standard graphics plot, it will
 overwrite the existing plot; for everything else it will append to the
 history. I plan to fix this. Suggestions are welcome. Thomas had
 mentioned the following:
 http://www.mail-archive.com/rkward-devel@lists.sourceforge.net/msg00853.htm
 l
 
 4. Remove from history is self explanatory
 
True, nothing to add here (but see my suggestion above).

 5. Clear history will clear the entire plot history, but you can
 still add the displayed plot back into the history using + icon
 
 6. The Show info action currently uses kdialog (recently changed it
 from readline ()), but as soon as Thomas returns (and finds time to
 implement a dialog box connection on the C++ side) I plan to change it
 to a more native version. (Although, wherever rkward can run kdialog
 is available, even on windows. One just has to figure out the right
 path to it!)
 

Simple and informative. Works for me.

 7. Since his (Thomas's) mail, I have updated the svn code to include
 lattice plots in the plot history as well. (I use lattice very
 frequently.) Recording and replaying these plots is different from
 those of the standard graphics plots. The difference is exploitable in
 a useful way - the plot call can be extracted / displayed. So, if you
 use lattice, give it a try, esp. the Show Info action.
 
 What next?
 a. Fix the Add to history action in a more intuitive way
 b. If possible, replace the info button by a persistent 

Re: [rkward-devel] anyone using KDE 3 version of rkward?

2010-09-01 Thread Stefan Rödiger
KDE4 only here

Regards
Stefan
 Original-Nachricht 
 Datum: Tue, 31 Aug 2010 20:36:50 -0400
 Von: Prasenjit Kapat kap...@gmail.com
 An: RKWard-devel@lists.sourceforge.net, rkward-us...@lists.sourceforge.net
 Betreff: [rkward-devel] anyone using KDE 3 version of rkward?

 Hi,
 
 I would like to know how many folks still use the KDE3 version of
 rkward (0.4.9x).
 
 The reason I ask is this:
 I've, partially, ported some of the recent plot history features to
 it. It is not clean but satisfies my day-to-day needs (Yes, I have
 to use the KDE3 version in the department!). If there is a demand, we
 can try to release another version of it: 0.4.9d (?) (If Thomas
 agrees!) The KDE4 version and its bug fixes will be the top priority,
 of course. So, the 0.4.9d release, if done, will be at least a few
 weeks after the upcoming 0.5.x release.
 
 I just wanted to get a heads up!
 
 For those wondering about the plot history feature, it is a
 browse-able history of plots that the user creates. A screen shot is
 here:
 http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Screenshots#Graphics_history_actions_.28from_trunk.29
 
 The screen shot does not represent the final version, it is subject to
 change.
 
 Regards,
 -- 
 Prasenjit
 
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Re: [rkward-devel] altering rk.graph.on and rk.graph.off

2010-08-31 Thread Stefan Rödiger
Am Dienstag 31 August 2010, 05:54:41 schrieb Prasenjit Kapat:
 Hi Stefan,
 
 On Mon, Aug 30, 2010 at 8:23 PM, Stefan Rödiger stefan_roedi...@gmx.de 
wrote:
  Hi Prasenjit,
  
  I simply love the stuff you do. Never thought of it, now I won't miss it.
  It is so convenient, smart and useful.
 
 Thanks ;) I wish it was implemented in a better by R. Consider this
 example (nothing to do with rkward:
 
 # print device list and the currently active device:
 f - function () {print (dev.list ()); print (dev.cur ())}
 
 x11 ()
 f ()
 plot (0,0)
 png (file = tmpplot_dev3.png, width = 400)
 f ()
 plot (rnorm (100), rnorm (100))
 pdf (file = tmpplot_dev4.pdf, width = 4)
 f ()
 dev.off () # closed pdf, x11 is now active !!
 f ()
 dev.off () # closes x11!! png is now active
 f ()
 dev.off () # closes png, FINALLY!
 
 The problem, is that dev.prev () and dev.next () are implemented in a
 cyclical numeric order. In this sense,
 dev.off (which = dev.prev ())
 might make more sense, than, the currently implemented:
 dev.off (which = dev.next ())
 yet, the main problem would persist.
 
 But in implementing a linked list of active devices would pose some
 logical problems (what happens if you close the previously active
 device as opposed to closing the current device?), and hence, I think,
 the simplistic dev.prev and dev.next exists. In that sense, my fix
 is buggy. Hmm...
 
  Thomas asked for feedback some weeks ago which I will try to address
  later.
 
 See if you can use the latest svn code.
 
  One stupid question. Right now it is possible to copy the preview plot to
  the output. I wonder if it is possible to embed the corresponding code
  too (since the user might be used to that in RKWard behaviour in
  RKWard)?
 
 Nice idea.

glad to hear

 I am guessing it should be easy to do, without the syntax
 highlighting. Looking at plugin/rkstandardcomponentgui.cpp, just
 sending  code_property-Preprocess () + code_property-calculate () +
 code_property-printout () to .rk.cat.output () would do it. Of
 course, a button on the GUI somewhere.
 

go for it ;)

 The button action will be more appropriate on the plugin dialog box
 rather than on the screen device window. (All though, I have arguments
 in favor of device window as well.)

why not both (at least for testing)?

 
 I'll refrain from tinkering with that part of the code! Let Thomas come
 back.
 

okay

  Regards
  Stefan
  
  Am Samstag 28 August 2010, 03:22:44 schrieb Prasenjit Kapat:
  Hi,
  
  I've modified the rk.graph.on () and rk.graph.off () functions
  slightly in trunk. Since many might be using these functions (as it is
  used in a lot of plugins), here is a little explanation:
  
  As you may know, in R, after dev.off () closes the current device,
  dev.next () is set as active. This applies to RKWard as well. But,
  when
  
  rk.graph.on (); ; rk.graph.off (); # dev.off () is called inside
  rk.graph.off ()
  
  is executed (in some form or the other), dev.next () is not
  necessarily the device that was active before rk.graph.on () was
  called. This creates a little confusion (at least to me, see [1]
  below) especially when copying a device to output via Device  Copy
  device to output. Hence the fix.
  
  For those following the trunk, let me know if you see any regressions
  or non-intuitive behavior. Of course, this only affects rk.graph.on
  and rk.graph.off and DOES NOT alter the usual (R's) behavior of
  dev.off ().
  
  Regards,
  --
  Prasenjit
  
  [1]
  x11 ()
  plot (0,0)
  x11 ()
  plot (1:10,1:10)
  dev.copy (device = rk.graph.on); rk.graph.off ()
  dev.off (); # closes the wrong device, w/o the fix.


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Re: [rkward-devel] altering rk.graph.on and rk.graph.off

2010-08-30 Thread Stefan Rödiger
Hi Prasenjit,

I simply love the stuff you do. Never thought of it, now I won't miss it. It 
is so convenient, smart and useful.
Thomas asked for feedback some weeks ago which I will try to address later.
One stupid question. Right now it is possible to copy the preview plot to the 
output. I wonder if it is possible to embed the corresponding code too (since 
the user might be used to that in RKWard behaviour in RKWard)?

Regards
Stefan

Am Samstag 28 August 2010, 03:22:44 schrieb Prasenjit Kapat:
 Hi,
 
 I've modified the rk.graph.on () and rk.graph.off () functions
 slightly in trunk. Since many might be using these functions (as it is
 used in a lot of plugins), here is a little explanation:
 
 As you may know, in R, after dev.off () closes the current device,
 dev.next () is set as active. This applies to RKWard as well. But,
 when
 
 rk.graph.on (); ; rk.graph.off (); # dev.off () is called inside
 rk.graph.off ()
 
 is executed (in some form or the other), dev.next () is not
 necessarily the device that was active before rk.graph.on () was
 called. This creates a little confusion (at least to me, see [1]
 below) especially when copying a device to output via Device  Copy
 device to output. Hence the fix.
 
 For those following the trunk, let me know if you see any regressions
 or non-intuitive behavior. Of course, this only affects rk.graph.on
 and rk.graph.off and DOES NOT alter the usual (R's) behavior of
 dev.off ().
 
 Regards,
 --
 Prasenjit
 
 [1]
 x11 ()
 plot (0,0)
 x11 ()
 plot (1:10,1:10)
 dev.copy (device = rk.graph.on); rk.graph.off ()
 dev.off (); # closes the wrong device, w/o the fix.
 
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Re: [rkward-devel] Atsakymas į:Re: Add Lithuanian translation

2010-08-11 Thread Stefan Rödiger
Am Samstag 07 August 2010, 17:18:23 schrieben Sie:
 Hello Mindaugas,
 
 Thanks for your translation. From what I can see is your translation
 complete.
 
 I will add it to SVN
 
 That is great. But in my translation is 3 messages untranslated: 2 related
 with serialization format, and 1 with pager command. Maybe you can
 explain the meaning of it?

No not really. I translated it literally. Let's wait for the comment of the 
others.

 Besides, in .pot is string Settings-Configure
 Settings-... (and not once), but I don't see such Configure Settings
 menu. I translated it same as Configuse RKWard. You need fix it.

True, I see. Thanks! We will fix this.

 
 Best regards,
 Mindaugas

Regards
Stefan

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Re: [rkward-devel] local

2010-08-05 Thread Stefan Rödiger
Am Donnerstag 05 August 2010, 09:21:15 schrieb Thomas Friedrichsmeier:
 Hi,
 
Hi

 On Wednesday 04 August 2010, Stefan Rödiger wrote:
  Thanks, that (remove a toplevel object) was what I did and it lead to
  occasional crashes of RKWard (well at least all objects were removed ;)
  ). That's why assumed to do something harmful and not intended by the
  developer. I'll keep an eye on it (maybe another nobody else has this
  problem?).
 
 well, I am somewhat curious as to the use-case for this. Of course the
 whole point of running plugin code in a local environment is to make sure
 the .GlobalEnv isn't touched, generally.


The use case might be quite specific for me. Anyways, recently I do most of my 
work with RKWard. A rush of data (from up to 96 files and thereof a certain 
row of different lengths) is read into RKWard (via custom script manly). 
Sometimes I use them in a matrix and sometimes not. However, usually I do not 
need the data when process but remove them otherwise there is to much clutter. 
Calling rm(list=ls()) or naming specific objects is fine but inconvenient over 
time. That's why I was considering to have a plugin which does the job for me 
BUT takes care that I don't delete whiteout a little reminder (Pay attention 
to what you do).  Basically I like the idea of having such a little helper.
 
 But in any case, it really should not crash. A backtrace may (or may not)
 be helpful, if you run into this again. If you can give me (mostly)
 reproducible step-by-step instructions on how to trigger the crash, that
 is probably next to fixing it.

I think it's easy to test for you. In the first place I didn't see what's 
wrong in my workflow but I guess I figured it out. I attached the plugin map 
and corresponding files. Location is /data/.

Scenario I: No object is open for editing (my.data not open)  in fresh 
started RKWard
1. Create objects
2. Invoke the plugin
3. confirm to remove and do so
4.  nothing should crash 

Scenario II: Object is open for editing  (my.data) in fresh started RKWard
1. Create objects
2. Invoke the plugin
3. confirm to remove and do so
4. Push accidentally no when asked Das Objekt 'meine.daten' wurde vom 
Workspace entfernt oder in einen anderen Objekttyp umgewandelt, aber es ist 
gegenwärtig zur Bearbeitung geöffnet. Wollen Sie es wiederherstellen? (sorry 
for German, but doesn't matter anyways)
Now it should crash.
If yes is chosen nothing will crash but obviously the object currently open 
will no be removed.

If you close the object in advance nothing will happen. One scenario I could 
not reproduce was that deletion of open (edited) objects other than my.data 
only sometimes caused crashes.

 
 If nobody else has seen this problem that does not mean it isn't a
 problem, or that it won't cause more wide-spread trouble on a later day.
I see

 So we should really try to get to the root of this (and also of the
 problem with the basic statistics plugin).
 
I'll help where I can.

 SVN version or 0.5.3?

SVN
 
 Regards
 Thomas

Regards
Stefan
!DOCTYPE rkpluginmap

document base_prefix= namespace=rkward
components
component type=standard id=simple_anova 
file=simple_anova/description.xml label=Simple Anova /
component type=standard id=sieve_plot 
file=plots/sieve_plot.xml label=Extended Sieve Plot /
component type=standard id=generate_random 
file=data/generate_random.xml label=Generate random data /
component type=standard id=sort_data file=data/sort.xml 
label=Sort data /
component type=standard id=sort_data2 
file=data/sort2.xml label=Sort data (Variant 2) /
component type=standard id=remove_objects 
file=data/remove_objects.xml label=Remove objects /

!-- These are purely for testing: --
component type=standard id=qtscript_test1 
file=testing/test1.xml label=QtScript Test 1 /
component type=standard id=qtscript_test2 
file=testing/test2.xml label=QtScript Test 2 /
!-- End --
/components

hierarchy
menu id=file label=File
menu id=import label=Import index=4
menu id=import_format label=Import format
/menu
/menu
menu id=export label=Export index=5
/menu
/menu
menu id=data label=Data index=3
entry component=generate_random/
entry component=sort_data/
entry component=sort_data2/
entry component=remove_objects/
/menu
menu id=analysis label=Analysis index=4
entry component=simple_anova index=9/
entry component=qtscript_test1 index=1/
/menu
menu id=plots label=Plots index=5
entry

Re: [rkward-devel] [JSS-Announce] Special issue on GUI's for R

2010-06-25 Thread Stefan Rödiger
Sounds tempting. J. Fox published 2005 in JSS an article about Rcmdr and I 
think with some effort we could achieve the same. I would like to offer my 
contribution to an article.

Regards
Stefan

Am Freitag 25 Juni 2010, 09:12:33 schrieb Matthieu Stigler:
 Hi
 
 In case you did not see it, there is a speicla issue of JSS on GUI,
 maybe a good opportuinity to present rkward?
 
 Matthieu
 
 Le 25. 06. 10 07:10, Jan de Leeuw a écrit :
  Announce
  
  Special issue of the Journal of Statistical Software on
  
  Graphical User Interfaces for R
  
  Editors: Pedro Valero-Mora and Ruben Ledesma
  
  Since it original paper from Gentleman and Ihaka was published, R has
  managed to gain an ever-increasing percentage of academic and
  professional statisticians but the spread of its use among novice and
  occasional users of statistics have not progressed at the same pace.
  Among the reasons for this relative lack of impact, the lack of a GUI
  or point and click interface is one of the causes most widely
  mentioned. But, however, in the last few years, this situation has
  been quietly changing and a number of projects have equipped R with a
  number of different GUIs, ranging from the very simple to the more
  advanced, and providing the casual user with what could be still a new
  source of trouble: choosing what is the GUI for him. We may have moved
  from the “too few” situation to the “too many” situation
  
  
  This special issue of the JSS intends as one of its main goals to
  offer a general overview of the different GUIs currently available for
  R. Thus, we think that somebody trying to find its way among different
  alternatives may find useful it as starting point. However, we do not
  want to stop in a mere listing but we want to offer a bit of a more
  general discussion about what could be good GUIs for R (and how to
  build them). Therefore, we want to see papers submitted that discuss
  the whole concept of GUI in R, what elements it should include (or
  not), how this could be achieved, and, why not, if it is actually
  needed at all. Finally, despite the high success of R, this does not
  mean other systems may not treasure important features that we would
  like to see in R. Indeed, descriptions of these nice features that we
  do not have in R but are in other systems could be another way of
  driving the future progress of GUIs for R.
  
  In summary, we envision papers for this special issue on GUIs for R in
  the following categories:
  
  - General discussions on GUIs for statistics, and for R.
  
  - Implementing GUI toolboxes for R so others can program GUIs with them.
  
  - R GUIs examples (with two subcategories, in the desktop or in the
  cloud).
  
  - Is there life beyond R? What features have other systems that R does
  not have and why R needs them.
  
  
  Papers can be sent directly to Pedro Valero-Mora (vale...@uv.es
  mailto:vale...@uv.es) or Ruben Ledesma (rdlede...@gmail.com
  mailto:rdlede...@gmail.com) and they will follow the usual JSS
  reviewing procedure. Initial deadline is December 2010 with final
  versions published along 2011.
  
  ===
  Jan de Leeuw; Distinguished Professor and Chair, UCLA Department of
  Statistics;
  Director: UCLA Center for Environmental Statistics (CES);
  Editor: Journal of Multivariate Analysis, Journal of Statistical
  Software; US mail: 8125 Math Sciences Bldg, Box 951554, Los Angeles, CA
  90095-1554 phone (310)-825-9550;  fax (310)-206-5658;  email:
  dele...@stat.ucla.edu mailto:dele...@stat.ucla.edu
  .mac: jdeleeuw ++  aim: deleeuwjan ++ skype: j_deleeuw
  homepages: http://gifi.stat.ucla.edu ++ http://www.cuddyvalley.org
  
   
   -
   
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Re: [rkward-devel] [JSS-Announce] Special issue on GUI's for R

2010-06-25 Thread Stefan Rödiger
Okay I'll try to take over the lead position. I have to admit that I'm working 
currently on two papers … but let's see how far we get.

So far we have in the boat:

Thomas (some content, advise, comments)
Meik (content, writing)
Matthieu (feedback)
Detlef (content, writing)
Prasenjit (writing on statistical terms, graphics) 
Stefan (content, writing, coordination)

That sounds healthy.

Regarding the processor from my own experience OOo was the better tool when 
working with several people. Line numbering, plain format, change tracking, 
grammar and spell check, graphical arrangement are some not to underestimate 
benefits. From odt to tex is an comparable easy transition when a paper is in 
the final shape content wise. However, I'm also open for tex if all consent. 
SVN sounds good to me.

For the planning:
1) I'll try to make an outline till Friday (02.07.2010) next week (or 
earlier). Then I'll sent it to you.
2) We discuss the outline (topics/chapter, needed figures, …)
3) We'll strip down the paper in sections and start corresponding documents.
4) Fill the parts with content (either person wise or in a certain order).

More to come.

Regards
Stefan


Am Freitag 25 Juni 2010, 11:33:59 schrieb Thomas Friedrichsmeier:
 Hi,
 
 I saw that announcement, indeed, I really think we should strive to make
 use of this opportunity. Thanks for sending a reminder to the list.
 
 If possible, I would like one or more of you to step forward and take
 the main responsibility for this article. I will be happy to supply
 details, important design considerations, etc. But I don't have an
 academic background in software sciences, and I'm not quite sure whether
 I can find the time to pick up on the discourse and jargon, and to do
 the writing.
 
 Naturally, if you do the bulk of the writing, you get to be first
 author(s).
 
 Stefan Rödiger schrieb:
  Sounds tempting. J. Fox published 2005 in JSS an article about Rcmdr and
  I think with some effort we could achieve the same. I would like to
  offer my contribution to an article.
 
 Thanks! Perhaps we can use the Fox article as a sort of template for
 getting started, too.
 
 How much time are you able/willing to invest into this? Could you
 imagine to act as main author, alone or in a team?
 
 Regards
 Thomas
 
 
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[rkward-devel] QtScript

2009-12-01 Thread Stefan Rödiger
Hi Thomas,

I read about QtScript in another thread and I wonder when it will be useable 
(or for testing). I'm looking forward to this.

Regards
Stefan

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Re: [rkward-devel] RKWard 0.5.2 is released

2009-10-26 Thread Stefan Rödiger
Am Montag 26 Oktober 2009 17:49:05 schrieb Thomas Friedrichsmeier:
 Hi!
 
 RKWard version 0.5.2 is officially available, now. An announcement and list
  of changes can be found at http://rkward.sf.net .
 
 Many thanks to all contributors, and sorry for not sticking to the time
 schedule (next time will be better, I hope)!
 
 Regards
 Thomas
 

Great news. Now I'm waiting eagerly for the new plugin system to come.

Regards
Stefan

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Re: [rkward-devel] Call for testing: RKWard 0.5.1-pre4 / updated release schedule

2009-07-27 Thread Stefan Rödiger
On Monday 27 July 2009 14:29:15 Thomas Friedrichsmeier wrote:
 On Saturday 25 July 2009, Stefan Rödiger wrote:
  While working with packages I was wondering if we should make loading a
  local package/library more obvious. I mean Settings-Configure
  Packages is not a place were I would try to find and load a
  package/library. Even our hint in the RKWard help is brief and hard to
  find for a novice. What do you think?

 So, what do you suggest?

 Regards
 Thomas

I think either a button in the tool bar or an entry in the menu bar would do 
the trick. But I would 
prefer the tool bar variant. 

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Re: [rkward-devel] Call for testing: RKWard 0.5.1-pre4 / updated release schedule

2009-07-25 Thread Stefan Rödiger
On Friday 24 July 2009 14:10:24 Thomas Friedrichsmeier wrote:
 Hi all,

 I have extended the release timeline for RKWard 0.5.1, slightly, and
 prepared another preview release (0.5.1-pre4). If you can find the time,
 please do some testing, and provide your feedback, if possible, until
 Monday, July 27.

 The deadline for translations is also extended to July 27.

 Downloads for windows and linux/unix are linked from the download page:
 http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Download_RKWar
d .

 The updated release schedule can be found in the wiki at:
 http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Release_Schedu
le .

 Regards
 Thomas

Tested under Debian/Sid. I'm pleased to tell: No issues, no crashes. I tested 
a bunch of plug-ins, 
package update, Help, HTML output, ..., stuff a user would do.

While working with packages I was wondering if we should make loading a local 
package/library more 
obvious. I mean Settings-Configure Packages is not a place were I would 
try to find and load a 
package/library. Even our hint in the RKWard help is brief and hard to find for 
a novice. What do 
you think? 

Regards
Stefan

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Re: [rkward-devel] QtScript

2009-06-17 Thread Stefan Rödiger
On Tuesday 16 June 2009 10:58:41 Thomas Friedrichsmeier wrote:
 Hi,

 On Monday 15 June 2009, Stefan Rödiger wrote:
  I wonder if there is any news regarding QtScript. Will it be the future
  or are there other candidates/suggestions/solutions?

 no, not really. I have looked at bit closer at Kross, and that seems like a
 good solution for the implementation (also, it's already in kdelibs).
 However, Kross is only the bridge, not the scripting language itself. In
 theory Kross supports using a variety of different scripting languages, but
 I think that's a terribly good idea in the long run.


If I remember correctly the Amarok devs also dropped support for a couple of 
languages. They had to 
much of everything.
At the end it sounds like a nightmare for me too. True, one solution that fits 
all needs is best. As 
long it is something common. Qtscript might indeed match this demand somehow.

 QtScript still is the most likely candidate for the language, I think.g
 However, I'd like to do a bit of experimenting, before reaching a final
 decision.

 One pre-requisite to working on this, is to have basic automatic plugin
 testing (see
 http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Feature_Plan#A
utomated_Plugin_Testing ), so we don't run into too many unpleasant
 surprises.

In any  case it means a rewrite of many plug-ins. Therefore it's better to have 
a solution which 
works in the long run. I'll wait so long.


 Regards
 Thomas

Regards
Stefan


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Re: [rkward-devel] RKWard 0.5.1-pre2: First preview of RKWard on Windows

2009-06-15 Thread Stefan Rödiger
On Monday 15 June 2009 17:28:29 Thomas Friedrichsmeier wrote:
 Hi,

 this is to announce the first preview release of RKWard running on MS
 Windows. If you have that other OS available, please give this a try:
 http://rkward.sourceforge.net/temp/install_rkward_0.5.1-pre2.exe . I fully
 expect there are still a lot of issues, including potential problems with
 the installer, but I think we are ready for a first round of testing.

 A number of significant changes have happened on the Linux/BSD platform as
 well (see
 http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Feature_Plan
 for some of them), and if you would like to see them now, the usual source
 tarball is here:
 http://rkward.sourceforge.net/temp/rkward-0.5.1-pre2.tar.gz .

 An official 0.5.1-release is not yet scheduled, and is probably still some
 time away. A release timeline will be announced whenever a release is
 nearing, and as usual we will allot time for testing, translating and
 packaging. Still, with the summer vacation-season coming up, translators
 may want to start updating translations for 0.5.1-pre2, just in case.

 Regards
 Thomas

Wow, this is fast. I'll try to test it ASAP.
Does it make any sense to test it in Wine?

Regards
Stefan

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Re: [rkward-devel] RKWard 0.4.9b and 0.5.0d released

2009-05-11 Thread Stefan Rödiger
Am Monday 11 May 2009 11:40:49 schrieb Thomas Friedrichsmeier:
 Hi,

 RKWard 0.4.9b and 0.5.0d are now officially released. As usual,
 http://rkward.sf.net/ has an announcement with a summary of the changes.

 Thanks for your testing / contributions!

 Regards
 Thomas

Thanks everybody!

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Re: [rkward-devel] 2009 Season of Usability Call for Projects Open Until April 15 2009

2009-03-31 Thread Stefan Rödiger
Am Tuesday 31 March 2009 13:03:45 schrieb Thomas Friedrichsmeier:
 Hi,

 On Tuesday 31 March 2009, Celeste Lyn Paul wrote:
  OpenUsability Season of Usability is a series of sponsored student
  projects to encourage students of usability, user-interface design, and
  interaction design to get involved with Free/Libre/Open-Source Software
  (FLOSS). During a 3 month collaboration, students work together with an
  experienced usability mentor and key developers of the project to improve
  the user experience of a FLOSS application. The next Season of Usability
  student projects will start in May 2009.
 
  FLOSS Projects who would like to benefit from a usability student are
  encouraged to fill in our Call for Projects:

 I don't think, I'd have the time to function as a technical mentor for
 RKWard, so I'm not going to register RKWard. However, if you feel up to
 that task, that would certainly be an exciting oppurtunity, and I'd try to
 help out here and there, as needed.

 Also, a usability review of our plugins alone, or even just a small sub-set
 of our plugins would offer ample oppurtunities for usability students, and
 RKWard alike. That is, depending on the task, a technical mentor would not
 even have to be a core/C++-coder.

Sounds really tempting but I wonder if it's wise to work on that now since you 
seriously consider to 
change the underlying technology of the plug-in design (and therefore the GUI I 
assume). Later when 
all is settled we have to of course.


 So, if you think you're going to have the time, skill, and motivation
 between May and August, speak up, and we'll develop some ideas on what
 tasks we could define for the Season of Usability. Just don't wait for me
 to take the first step.


Therefore for me not this year. Next year maybe.

 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] RKWard 0.5.0c-test5

2009-03-29 Thread Stefan Rödiger
Am Sunday 29 March 2009 21:57:34 schrieb Thomas Friedrichsmeier:
 Hi all,

 many thanks for all your testing efforts so far. While I'm deferring many
 of the reported issues to the time after the release, I'm starting to feel
 confident that we've found and fixed the most serious showstoppers.

 I've just prepared a -test5 release, available at
 http://rkward.sf.net/temp/ . If you've tested some of the previous -test
 releases, you will not find too many differences, but it would still be
 nice, if you could make sure, the installation and basic features continue
 to work.

 Barring further grave problems, I'll try to roll up the final release on
 Monday or Tuesday.

 Regards
 Thomas

Works on Debian/Sid with R 2.9.0~20090327-1 when started from a console without 
any issues so far.


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Re: [rkward-devel] authors

2009-03-28 Thread Stefan Rödiger
Am Sunday 29 March 2009 00:35:39 schrieb Stefan Rödiger:
 Did we forget somebody who contributed?
 Jannis (German translation, bug report) is not yet mentioned (will be
 updated) as far as I'm aware of.

 Regards
 Stefan


Please ignore this, I sent it to the wrong thread.

Regards
Stefan

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Re: [rkward-devel] Getting ready to release RKWard 0.5.0c - Call for testing

2009-03-26 Thread Stefan Rödiger
Am Wednesday 25 March 2009 21:48:24 schrieb Thomas Friedrichsmeier:
 Hi all,

 if a reminder was needed, today my mailbox had two further hints to finally
 get going with a new release.

 Firstly, two people pointed out that we had an embarassing crash-problem
 with the upcoming R 2.9. I hope to have fixed that.

 Secondly, the German c't magazine is asking for permission to include
 RKWard on a covermount DVD-ROM.

Wow. That's something big.

 They say RKWard has been pre-selected to be 
 included in this collection of free and shareware programs. Not sure
 what pre-selected means, whether all they still need is our consent
 (which I strongly intend to give), or whether they will do some further
 post-selecting after that. However, c't really is a pretty renowned IT
 magazine in Germany, and looking for developers to help in our project, a
 paragraph or two in c't might be just the sort of publicity we need to get
 forward. --- Well, giving them explicit permission to distribute under the
 GPL is a no-brainer. The other part is getting RKWard into a presentable
 state. c't is asking for feedback until April 1st.

I hope we manage it.

 So: 

 I've created a new test version 0.5.0c-test1, available in source and
 i386 .deb from http://rkward.sourceforge.net/temp/ (or from SVN). Note that
 I'll only take care of a KDE 4 release, right now. A KDE 3 release of all
 our fixes will follow (0.4.9b), but that's not my priority.

 If you've been following SVN, recently, you've seen all but the most recent
 changes, already. So although releasing before April 1st could probably
 best be called sudden, I think we really are in pretty good shape to rush
 it this much. Still I would like to ask you to download 0.5.0c-test1 and

 1. test everything you care about once more
   - Especially, if you have a chance to test on Ubuntu, and with
 combinations of KDE and R other than KDE 4.2.1 and R 2.9, that would be
 great.
 2. remind me of important issues that still need fixing.

 Two things that are not yet included in the test1 release:
 1. The German translation update provided by Jannis. I'll wait until Stefan
 has given it a look (go ahead and commit to SVN, when ready).

Done. Please check again.

 2. The item response theory plugins by Meik. Are those fit to be included
 in the official pluginmap? In whole, or only partially?

 I would very much like to rush the release, in order to meet the April 1st
 deadline. Since my own time schedule is hairy as well, that means I need
 all substantial feedback before Monday morning. So, please, if you can find
 the time, take a look until then.


Please check the changes I made to the boxplot. They work in all my tests but 
... .

 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] a patch [was: Getting ready to release RKWard 0.5.0c - Call for testing]

2009-03-26 Thread Stefan Rödiger
Am Thursday 26 March 2009 22:13:16 schrieb Thomas Friedrichsmeier:
 Hi,

 On Thursday 26 March 2009, meik michalke wrote:
  i figured it out -- this is due to the same path differences for kde4 in
 
  ubuntu 8.04 that messed up my installation:

 ok, thanks a lot. I adjusted the build rules along those lines and rolled
 everything up in a -test2 release, now at
 http://rkward.sourceforge.net/temp/ . Once again, it would be great, if you
 could test on various flavors of Ubuntu, to see if this really fixes all
 problems.

 I also moved the IRT plugins to their own pluginmap and unhid them. I would
 have liked to give them a serious review, first, but also there's no point
 in hiding them from the world forever. We should keep in mind to formalize
 and improve our review process. Anyway, that's for another day. For now,
 everybody please take a look at the IRT plugins (menus Analysis
 and Plots), if you can find the time. If you have objections againts
 including them in the official release, please speak up.

No objections here. But honestly I have no real clue how to stress the plugins, 
thus my opinion is 
based on I played with it.


  [btw, is there a more elegant way of checking for directories and setting
  a variable than i've used?]

 It is always a pain in those makefiles. I simplified the second portion of
 your patch a bit, though.

 Regards
 Thomas

Regards
Stefan

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Re: [rkward-devel] rkward on planetkde

2009-03-05 Thread Stefan Rödiger
Am Sunday 15 February 2009 14:21:10 schrieb Thomas Friedrichsmeier:
 Hi!


Hi 

 On Tuesday 10 February 2009, Roy Qu wrote:
  Good article!
  I wish thomas could make some spare time to make a roadmap / feature
  plan, then
  we could see if there is anything we can do to help push the development
  of rkward forward.

 Point taken. Problem is, there is no real roadmap. You'll find an unsorted
 collection of planned features in the TODO-file, and the feature request
 tracker. But here's a short list of the major areas that I think should be
 dealt with, next:

 1. Make (a) new release(s). This is definitely step 1 of any roadmap.
 Pretty important to get the recent fixes out into the world, soon. What
 needs to be done is basically:
   - Make sure, the ChangeLog is complete
   - update .po files, if available
   - Add Roy in the credits (main.cpp)
   - Create test release
   - Test
   - Create final release
   - Write some short notes for
   - rkward.sf.net
   - apps.kde.org
   - freshmeat.net
   - rkward mailing lists
   - If possible, update the debian-files

 Creating (test-) releases is fairly easy for KDE4: Just run the makedist.sh
 script with the version name as parameter. For KDE3 there is a long and
 illogic procedure to follow. It's probably much easier to me to just do it,
 than to explain it, so I'll try to find the time, soon. For KDE4, it would
 be great if somebody could give it a try, so you'll be able to jump in
 again in the future. If (when) you run into problems like lack of
 permissions or whatever, just ask - I'll try not to take too long in
 responding.


Has anybody done this so far (or even succeeded)?

 2. Create a Windows-port. I think it is important to address this in the
 not too distant future, but it probably isn't the most reward task to get
 started with. If you do feel like giving it a try, the main steps are:
   - (Get a KDE development environment running on your Windows box)
   - There is quite some platform dependent stuff in the startup code of R
 (much of it for no good reason, it seems). Cope with that in
 rembedinternal.cpp. - Review the code for system specifics, esp. bash
 commands (grepping for QProcess / KProcess should show the places in
 question), and perhaps path separators in some places.
   - Find a solution for the graph windows. This may well be the most
 difficult step, though it should be solvable somehow. Perhaps at first, the
 whole windowcatching mechanism would need to be disabled in order to make
 the rest of rkward compile.


This sounds difficult and I doubt there are any developer resources yet.

 3. Plugins / Scripting: We've touched the subject in the past: The plugin
 system needs better scripting. The likely candidate would be QtScript. This
 task will need to be addressed very carefully, since design decisions at
 this point will be very hard to change later on.

If I get it right, this would make existing plug-ins obsolete. Or do I get it 
wrong here?

 I think this task can 
 roughly be divided into the following steps:
   - Create a QtScript-thing which basically does what the PHP-script 
 engine
 does - i.e. generate the preprocess / calculate / printout code-segments
 when called from C++.
   - As a first test, implement the color-picker mini-component 
 with this
 engine. Watch out for potential performance issues in the graphing plugins.
   - Expand the solution to allow manipulation of component-properties 
 from
 the script. I.e. create a replacement for the cumbersome logic-section of
 current plugins. At this point it is important not to add too much. The
 main point to consider is to enforce keeping the plugins as modular as
 possible. Esp. it should be impossible (or a least very hard) for a plugin
 to manipulate a plugin it is embedded in, or that it embeds.
   - To test the design and implementation, try to re-implement the
 plot-options component with this solution. At this point, extensive review
 of the design should follow.
   - Finally, allow creating complex GUI-elements by QtScript. The 
 important
 point to keep in mind is once again to keep things modular: Such
 GUI-elements should be embeddable by other plugins, and should be re-used
 as much as possible.
   - Sample implementations might be: A chi-square-table input 
 tool, a more
 elaborate color picker complete with color wheel, etc.


To be honest I can hardly contribute any suggestion about the future direction 
of the Plugins / 
Scripting. As a matter of fact a simple solution which is easy to learn would 
be great.

 4. Plugins / Development process: The most important area of growth in
 rkward will need to be the plugins. By now we have a good hand full of
 people who know how to create plugins.

Would this get better with QtScript?

 What we really lack is a good review 
 process. There are still a number of plugins 

Re: [rkward-devel] Ctrl+S conflicting

2009-01-29 Thread Stefan Rödiger
Am Thursday 29 January 2009 20:27:54 schrieb Thomas Friedrichsmeier:
 Hi Roy, Stefan,

  I have read some documentation regarding your patch. But your patch seems
  reasonable to me. However, I'll will wait for a comment from Thomas as
  before.

 once again, I have not tested at all, but both parts of the patch look
 reasonable to me. Please apply (in two separate commits, since these are
 two issues). It's great to know someone keeps the project going, while I'm
 too busy. Thanks a lot, Roy (but also thanks to all the others for testing,
 reporting, etc.)!

 Regards
 Thomas

okay, will be done over weekend.

tanks

Stefan

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Re: [rkward-devel] Ctrl+S conflicting

2009-01-27 Thread Stefan Rödiger
Am Friday 23 January 2009 14:15:30 schrieb Roy Qu:
 I change all QAction* to KAction* in rkward.h, and the shortcut setting
 worked.
 And I find another bug: in R console, backspace key don't work when the
 cursor is at begin of current line and some part of the line is selected.
 Attachment is a patch for these 2 bugs.

Hi Roy,
I have read some documentation regarding your patch. But your patch seems 
reasonable to me.
However, I'll will wait for a comment from Thomas as before.

Regards
Stefan


 2009/1/23 Prasenjit Kapat kap...@gmail.com

  Hi All,
 
  On Thu, Jan 22, 2009 at 7:42 PM, Stefan Rödiger stefan_roedi...@gmx.de
 
  wrote:
   Am Tuesday 13 January 2009 08:29:27 schrieb Prasenjit Kapat:
   Hi All,
  
   Since KDE 4.2 is about to release, I am test driving it on a separate
   partition... So, I checked out the trunk of rkward from svn and am
   giving it a spin... The compile seems to work without any errors (lots
   of warnings, of course).
  
   When a script editor window is open, pressing Ctrl+S to save the file,
   results in a conflict with the Save Workspace shortcut. This is
   observed using the svn trunk of rkward and KDE 4.1.85 on Kubuntu 8.10.
  
   I presume Thomas is busy so any clarification will take time..
  
   I was fiddling with the svn code myself. Lines 349 - 352 of rkward.cpp
   specifically sets Qt:ControlModifier + Qt::ShiftModifier + Qt::Key_S
   as the action shortcut for Save Workspace but, the Shift modifier
   seems to be ignored, as shown below:
  
   fileSaveWorkspace = actionCollection ()-addAction
   KStandardAction::Save, file_savex, this,
   LOT(slotFileSaveWorkspace()));
   fileSaveWorkspace-setText (i18n (Save Workspace));
   fileSaveWorkspace-setShortcut (Qt::ControlModifier +
   t::ShiftModifier + Qt::Key_S);
   fileSaveWorkspace-setStatusTip (i18n (Saves the actual document));
  
   One solution (that works) is to change the Save shortcut of Kate
   Part  from Kate to something other than Ctrl+S. But that an
   outside-of-rkward solution.
  
   I've filed a bug report on this for rkward, so that it doesn't get
   lost. Any one seen this issue? Any clue? As of now, I've commented the
   above four lines in rkward.cpp for my local compilation.
  
   I can ask on kde devel list about this, but I am not at all familiar
   with the structure of rkward codes, so it may seem pretty lame!
  
   Hi Prasenjit,
  
   As you may have seen in the list Roy Qu provided a patch (in trunk now)
 
  and according to Thomas it
 
   might solve your problem. Can you confirm this?
 
  Well, Yes and No!
 
  No:
  Roy's patch was only for the rkconsole.cpp. So, only the RConsole
  part was affected (this is my understanding, which given my C++
  knowledge, might very well be wrong).
 
  Yes:
  I did not know this: you could right click on Save Workspace  Ctrl+S
  menu option to change its shortcut (to, say, Ctrl+Shift+S -- main
  not alternate). This creates the file
  ~/.kde/share/apps/rkward/rkwardui.rc  wherein this shortcut info is
  stored. Similarly, for Open Workspace  Ctrl+O  to Ctrl+Shift+O. And
  now, all the four shortcuts work as intended.
 
  So, as you see, the Yes part was not influenced by Roy's patch. I
  actually tried it - removed Roy's patch and changed the shortcuts.
  Works.
 
  The issue then is, why are the shortcuts from the source code
  (rkward.cpp) not honored?  I should add: my previous bug-mail was
  under 4.1.85 (beta2) and today I did all this on 4.1.96 (rc1) - so I
  guess the KDE APIs are still buggy!?
 
  One more thing (ala Steve Jobs): If you use Ctrl+S or Ctrl+O before
  changing the shortcuts you get the Ambiguous Shortcut message. Then
  when you try to change the shortcuts, RkWard quits with Fatal Error.
  So, you start the application again, and the change the shortcuts
  first.
 
   Regards
   Stefan
 
  Thanks to Roy for the RkConsole patch...
  --
  Prasenjit
 
 

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[rkward-devel] In progress to add item response theory plugin by m.eik

2008-11-09 Thread Stefan Rödiger
Hi Meik,

I plan to add your irt plug-in (v. 0.03) within the next days to svn. Is it 
okay for you or should I 
wait for an update?

Regards

Stefan
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Re: [rkward-devel] questions on RKWard

2008-11-08 Thread Stefan Rödiger
Am Wednesday 05 November 2008 23:34:16 schrieb Horace Tso:
 Folks,


Hi Horace

 I'm making progress moving from Windows to Linux and have RKward up and
 running. I read somewhere that Rkward's supposed to be the Tinn-R for linux
 and Tinn-R has worked out great for me. So naturally I'd like to do the
 following, if possible,

 1. How to ask Rkward not to load the last saved image. Right now whenever
 it starts, it loads an image from some obscure corner of my directory. I
 can't quite figure out where it gets that image from. On the command line,
 I can do --no-restore. But there seems to be no place to sneak in these
 command line options under Rkward.  A startup config file hidden somewhere?


Actually I quite don't understand what you mean here. Would you be so kind to 
give a screen shot or 
so?

 2. Customize CTRL-keys. Just out of the box, many menu options do not have
 a control key associated with them. Any way to pick my favorite key?


In certain aspects of RKWard yes on other parts saddly no. Editing R-code 
depends largely on 
functions provided by KDEs Kate editor. This is from the help:

Most shortcuts are not yet configurable (this will be added in a future 
release), but you can 
configure most shortcuts of the script editor. To do so, open a script editor 
window, then 
choose 'Settings-Configure editor-Short cuts' from the menu.
A lot of these things is hard coded in the source code, therefore there is no 
easy way for 
non-developers to fix according to their needs. Sorry for that. Anyway you can 
find additional 
information in the RKWard help. Sorry but RKWard is still work in progress.


 3. I'm used to typing ?command on the R-console and get a HTML help page
 pops up. But when I do that, a shockingly large window comes up and
 complains in many words about some error which I can't quite figure out
 what it's saying (sorry don't have linux in front of me right now).


Could please try to give the error output?

 4. I see there is an 'Output' tab by default. But command results are sent
 to R-console, and nothing seems to happen in 'Output'.


Hope I understand you correctly. The Output tab is used in case you have done 
any operation from the 
menus but not if you use the script editor or the console.

 I have R 2.7.1 running under KDE on openSUSE 10.3.

 TIA.

 Horace

Just in case Rward turns out not to be what you need, did you consider to run 
Tinn-R via Wine 
(www.winehq.org/)? I tested it and at least it installed and did operations 
like opening files and 
so on. Of course you would also need to install R under Wine. Wine should come 
as a standard 
package with openSUSE. I'm not sure about the version here in Debain/Sid it is 
1.0.1.


Kind Regards

Stefan

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Re: [rkward-devel] RKWard failed to detect, which window was created, and so can not embed it

2008-06-22 Thread Stefan Rödiger
Am Freitag, 20. Juni 2008 06:04:50 schrieb Rodrigo Freire Oliveira:
 Hello,

 First of all congratulations are in order. I have started using R a couple
 of months ago and after I downloaded and installed rKward things have
 progressed faster and smoother. Unfortunately, my rKward installation seems
 to have a problem when it comes to embedding  the menu in a graphic window
 (even though the X11 window is on the same screen of the message!).


 If I type:
x11()
 The message shows up.
 If I try:
   options(display)
 I get
   $display
   NULL
 If I type:
  options(display=0.0)
 I still get the same.

 Using the rKward interface doesn't help much. I am using gentoo (linux
 distribution, kernle 2.6.24 SMP), rKward v.0.4.9a (gentoo installation),
 kde 3.5.9. I believe this information is limited but I don't know what else
 I should add. Any idea? If you need any extra information, please contact
 me.

 Best,
 Rodrigo

Hi Rodrigo,

I think it's related to the latest changes of X11() in R 2.7.X. Though graphs
look now nicer (http://cran.r-project.org/doc/Rnews/Rnews_2008-1.pdf p.51)this 
issue raised for RKWard. I think Thomas (Lead developer) 
is the only who can comment and fix this issue.
To my knowledge a workaround is to downgrade R to 2.6.X but there is no 
garante that this will work. But you can also ignore the warning message.

Kind regards
Stefan

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Re: [rkward-devel] Better looking graphs using cairo

2008-03-10 Thread Stefan Rödiger
Am Sonntag, 9. März 2008 22:44:45 schrieb Wouter Stomp:
 Hello,


Hi Wouter,

 I really like rkward,

glad to hear this. :)

 but the quality of the graphs it produces is not 
 as good as it could be. There is a R cairo package[1] available that
 produces high quality graphs. It supports alpha channels and
 anti-aliasing. It can output to the display, bitmap graphics and
 vector graphics. It would be nice if rkward used this to produce
 graphs, and also have an option to save graphs as svg vector files.

We are aware of this fact and some solutions were already discussed on the 
list. But so far we did not make any progress basically due to a lack of 
manpower.

Just in case you don't know. There are several options to export graphs as pdf 
or ps (eps compatible). This should give you high quality graphs at the end. 
To achieve this create a graph and chose the preview option - chose in 
the preview window the menu Device than Export ... - ... .
I recommend to use ps because these can be handled by many other tools 
(scribus and inkscape come to my mind here). 
Not an optimal solution and not really what you want but this is what we can 
offer out of the box for high quality graphs.

Another solution is to reuse the code output of RKWard in combination with any 
graphic package you desire.

 Would this be possible?


Basically yes, but I guess not anytime soon. But it is on top of the list.

 Cheers,

 Wouter



Thanks for your input.


 1. http://cran.r-project.org/web/packages/Cairo


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[rkward-devel] Jarque-Bera Normality Test

2007-12-14 Thread Stefan Rödiger
Hi list,

does anybody see a reason to keep Jarque-Bera Normality Test in 
the /under_development.pluginmap? Otherwise I'll push it into the 
distributions.pluginmap.

Kind regards
Stefan

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