[aroma.affymetrix] Re: Regarding the copy number states and further processing

2015-01-21 Thread Sam Padmanabhuni
Hi Liu, On Wednesday, January 21, 2015 at 4:21:04 PM UTC+1, Chengyu Liu wrote: Hi, Sam, No thanks, I don't need the reference papers. On Tuesday, January 20, 2015 at 6:52:42 PM UTC+2, Sam Padmanabhuni wrote: Hi Liu, That is good to know some one is doing similar stuff as mine. I

Re: [aroma.affymetrix] sfit

2015-01-21 Thread Henrik Bengtsson
It seems as you don't have the 'sfit' package installed. Not sure how you installed aroma.affymetrix in the first place (the recommended way is shown at http://aroma-project.org/install/), but try: source('http://callr.org/install#sfit') That should install 'sfit'. If the installation of

[aroma.affymetrix] sfit

2015-01-21 Thread Juanjo Lozano
Hi, I found Error: Package not loaded: sfit Execution halted in R version 3.1.2 (2014-10-31) -- Pumpkin Helmet Could you help-me? Best Juanjo -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of

[aroma.affymetrix] Re: Regarding the copy number states and further processing

2015-01-21 Thread Chengyu Liu
Hi, Sam, No thanks, I don't need the reference papers. On Tuesday, January 20, 2015 at 6:52:42 PM UTC+2, Sam Padmanabhuni wrote: Hi Liu, That is good to know some one is doing similar stuff as mine. I was going to through 2-3 papers which described to get a comprehensive list of CNVs