[aroma.affymetrix] smoothing after CRMAv2 and before CBS?

2013-12-03 Thread Emilie
/pairedTotalCopyNumberAnalysis) but haven't seen any options for smoothing. thank you very much, emilie -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You

Re: [aroma.affymetrix] smoothing after CRMAv2 and before CBS?

2013-12-04 Thread Emilie
/pubmed/22522925 ). I'd be interested in hearing more of your thoughts against this. Do you have an idea of how much resolution is lost by smoothing? Emilie On Tuesday, December 3, 2013 5:26:38 PM UTC-5, Pierre Neuvial wrote: Hi Emilie, It's certainly possible to do this within the Aroma