Hi Astrid I would double check that you are working with single FASTA files (not EMBL/GenBank) when creating the BLAST comparison. Also check that you have the subject sequence above the query sequence. If not let me know where the files are and I will take a look.
Regards Tim On 13/09/2013 21:54, "Astrid von Mentzer" <a...@sanger.ac.uk> wrote: > Hi, > > I get the error message: match goes off end of subject sequence 4419519. > > I can't seem to locate why it doesn't work. Ran files through seqret and tried > again, didn't work. > > Ideas? > > Regards, > Astrid > > *************************** > Astrid von Mentzer, PhD-student > University of Gothenburg > Institute of Biomedicine > Department of Microbiology and Immunology > Box 435 > 405 30 Göteborg > Sweden > > Phone: +46 31 786 62 21 > Fax: +46 31 786 62 05 > **************************** > > > > > > > > _______________________________________________ > Artemis-users mailing list > Artemis-users@sanger.ac.uk > http://lists.sanger.ac.uk/mailman/listinfo/artemis-users
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