[ccp4bb] PhD student at University of Auckland

Dear colleagues: We would like to bring to your attention the following opening available immediately. Fully-funded Ph.D. position at the School of Biological Sciences, University of Auckland We are seeking a highly motivated candidate to carry out structure/function studies of

Re: [ccp4bb] how many crystallographers are there?

From https://academic.oup.com/nar/article/47/D1/D520/5144142 in 2017 450 million structure data files were downloaded from the PDB FTP archive and unique PDB users (based on IP addresses) is estimated at >1 million. RCSB publications here https://www.rcsb.org/pages/publications where more

Re: [ccp4bb] AW: [ccp4bb] how many crystallographers are there?

When I last looked a couple of years ago, the number of subscribers to the BB was 6396. Given the many crystallographers who don’t subscribe to the BB, and the EMers who are not ex-crystallographers, I could well believe 20 or 30 thousand. HTH m From: CCP4 bulletin board

[ccp4bb] AW: [ccp4bb] how many crystallographers are there?

Roughly 3000 groups, i.e. 3 individuals, I would guess. Hth, Manfred Von meinem Sony Xperia™-Smartphone gesendet Scott Horowitz schrieb Hi all, I was recently asked how many biological crystallographers plus cryo-EM users there are in the world (in relation to how many people

Re: [ccp4bb] how many crystallographers are there?

You might want to quote how many researchers use the PDB instead. Maybe an inquiry to the PDB could give you that statistic. That would give you a big number On Wed, May 29, 2019 at 1:54 PM Scott Horowitz wrote: > Hi all, I was recently asked how many biological > crystallographers plus

Re: [ccp4bb] how many crystallographers are there?

Dear Scott, For the grant application, better question might be how many structural biologists are out there, because "a crystallographer" may be interpreted differently depending who is reading the grant application: are these the people who know crystallography, or people who solve structures

Re: [ccp4bb] how many crystallographers are there?

That gives me a place to start, thanks! On Wed, May 29, 2019 at 1:01 PM Diana Tomchick < diana.tomch...@utsouthwestern.edu> wrote: > Try asking the IUCr for information on crystallographers. > > Diana > > ** > Diana R. Tomchick > Professor >

Re: [ccp4bb] how many crystallographers are there?

Try asking the IUCr for information on crystallographers. Diana ** Diana R. Tomchick Professor Departments of Biophysics and Biochemistry UT Southwestern Medical Center 5323 Harry Hines Blvd. Rm. ND10.214A Dallas, TX 75390-8816

[ccp4bb] how many crystallographers are there?

Hi all, I was recently asked how many biological crystallographers plus cryo-EM users there are in the world (in relation to how many people could therefore be theoretically impacted by Foldit electron density tools, for the purposes of grant funding). I'm a bit at a loss as to even what order of

[ccp4bb] Postdoc position available in an enzymology laboratory at Florida State University

One postdoctoral position is available immediately in an enzymology laboratory to elucidate mechanisms of DNA/RNA synthesis, DNA lesion bypass, and base excision repair catalyzed by various human and viral DNA/RNA polymerases, and to mechanistically investigate gene editing enzymes including

Re: [ccp4bb] Has anybody put CCP4 into a singularity container?

Hi Kay, The idea of a software container is that you have a self-contained set of software with all its dependencies built in. This is particularly useful to make your software run in places where you cannot install other stuff (like on HPC solutions) or in places where your requirements

Re: [ccp4bb] Has anybody put CCP4 into a singularity container?

Hi Robbie, I had to read the paper you cite for getting a rough idea of what Frank meant, which is probably what you intended!? Do I have to read also the Supplement to find out more, or could you explain to CCP4BB readers what a singularity container's (???) advantages are? thanks, Kay On

Re: [ccp4bb] Has anybody put CCP4 into a singularity container?

Hi Frank, Yes we have, see https://onlinelibrary.wiley.com/doi/full/10.1002/pro.3353 Cheers, Robbie > -Original Message- > From: CCP4 bulletin board On Behalf Of Frank > von Delft > Sent: Wednesday, May 29, 2019 14:38 > To: CCP4BB@JISCMAIL.AC.UK > Subject: [ccp4bb] Has anybody put CCP4

[ccp4bb] Has anybody put CCP4 into a singularity container?

Hi all - see subject line. If they have, or have tried and failed, can they get in touch, please?  (Or more specifically, email Conor, conor.w...@oriel.ox.ac.uk.) Thanks! Frank To unsubscribe from the CCP4BB list,

[ccp4bb] PDRA at I24 Diamond Light Source

Dear all, We have an opening for a PDRA at I24, Diamond Light Source. We are looking for someone with experience, or a strong interest, in microcrystallograpy and serial crystallography who is enthusiastic about helping us develop new approaches and delivering them to the user community. For

Re: [ccp4bb] How to calculate compactness of a structure

On 29/05/2019 09:36, Xiaoming Ren wrote: I wonder if there is a way to calculate the compactness of a macromolecule structure. Maybe RosettaHoles2 is what you want? https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2998733/ Another question is, how can I calculate Matthews coefficient of a

[ccp4bb] How to calculate compactness of a structure

Dear ALL, I wonder if there is a way to calculate the compactness of a macromolecule structure. Is the ratio of surface area to volume a good indicator? Another question is, how can I calculate Matthews coefficient of a domain of a protein or one part of a complex? I welcome and appreciate

[ccp4bb] Scientific Data Curator position (PDB and EMDB)

Dear CCP4BB We are looking to recruit an expert structural biologist to join the PDBe curation team on the Wellcome Genome Campus near Cambridge. The work involves annotating preliminary PDB and EMDB submissions and extracting relevant biological information. The closing date for the post is