Hello Edward,
I am not really certain for my explanation, but your error message about
the namelist could be provoked by a problem in your input files. In fact
you have to oriented each strand and define limits of the two strands.
If you do a mistake with the orientation you can have this
04, 2011 4:44 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] DNA analysis with Curves+
Try and copy this on your command line and see if it works. The trick is to
shift first 3 lines by one space.
[x@zeus ~/curves]$ Cur+ !
inp file=data/1bna, lis=r+bdna,
lib=standard, end
2 1 -1 0 0
1
Hi, All,
I am trying to analyze DNA from a recent structure with the program Curves+
(R. Lavery et al, Nuc. Acids. Res (2009) 37:17 5917;
http://gbio-pbil.ibcp.fr/Curves_plus/Curves+.html). I have downloaded the
files, and untarred them to a directory curves on my machine. Running the
Make
.
Alternatively, I use 3DNA to generate the curves input --- which is less
cryptic.
-Original Message-
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Eddie
Pryor
Sent: Friday, February 04, 2011 4:05 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] DNA analysis
.
Alternatively, I use 3DNA to generate the curves input --- which is less
cryptic.
-Original Message-
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Eddie
Pryor
Sent: Friday, February 04, 2011 4:05 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] DNA analysis
