What does ProCheck say?
Xiaopeng Hu wrote:
Dear all,
I just notified that there is a big difference between the Ramachandran plot
analysis results produced by Coot and Morprobity (or Phenix). For the structure
I am working now, Phenix(Morprobity) gives out Ramachandran outliers 0.2%,
: Fri, Sep 30, 2011 07:12
Subject: [ccp4bb] Ramachandran plot difference between Coot and Morprobity (or
Phenix)
To: CCP4BB@JISCMAIL.AC.UK CCP4BB@JISCMAIL.AC.UK
What does ProCheck say?
Xiaopeng Hu wrote:
Dear all,
I just notified that there is a big difference between the Ramachandran plot
Hi Xiaopeng,
If you are feeding both programs exactly the same file then you are not
doing anything wrong. Notice that, if you calculate the Ramachandran plot on
Molprobity and then you go on coot, do a round of manual refinement, and
only then calculate the Ramachandran, then that can be the
2011/9/29 Xiaopeng Hu huxp...@mail.sysu.edu.cn
I just notified that there is a big difference between the Ramachandran
plot analysis results produced by Coot and Morprobity (or Phenix). For the
structure I am working now, Phenix(Morprobity) gives out Ramachandran
outliers 0.2%, favored 95.2%,
Dear all,
I just notified that there is a big difference between the Ramachandran plot
analysis results produced by Coot and Morprobity (or Phenix). For the structure
I am working now, Phenix(Morprobity) gives out Ramachandran outliers 0.2%,
favored 95.2%, whileas Coot gives out Outliers
