Re: [ccp4bb] expression of Cys-rich small protein

2010-11-21 Thread Guenter Fritz
Hi Laurie, nuclear protein, cysteines, my thumbs prickle it might be a zinc-binding protein. Although 12 Cys per 257 aa is not yet that much. If you have always DTT present oxidation should be no problem. Reconstitution of zinc sites can be very tricky and is not straightforward. Also E.coli

Re: [ccp4bb] expression of Cys-rich small protein

2010-11-17 Thread Anastassis Perrakis
We are trying to express for structural studies a 257 AA eukaryotic intracellular [...] As you describe about your protein, I guest your protein may required disulfide bonds to be folded correctly As Laurie described her protein is intra-cellular, so it will not need disulfide bonds,

[ccp4bb] expression of Cys-rich small protein

2010-11-16 Thread Laurie Betts
All - We are trying to express for structural studies a 257 AA eukaryotic intracellular (also possibly nuclear) protein (predicted to be single domain all-helical) that has 12 Cysteines. No known metal-binding function not that it couldn't happen. So far (E. coli) it expressed solubly as MBP

Re: [ccp4bb] expression of Cys-rich small protein

2010-11-16 Thread van dat nguyen
Hi Laurie, What E. coli strain did you use? As you describe about your protein, I guest your protein may required disulfide bonds to be folded correctly. E. coli cytoplasm is a reduced environment, which is not suitable to make disulfide bonded proteins. to solve this problem it is recommended

Re: [ccp4bb] expression of Cys-rich small protein

2010-11-16 Thread Tim Gruene
Dear Laurie, your cysteines might all be cytines, i.e. all paired and not really be the reason for the aggregation. Since you have soluble protein as long as MBP is tagged to it, why don't you test a large number of conditions for solubility? I'd probably start with a 3-D screen testing 2-4