The Sixth International Workshop on X-ray Radiation Damage to Biological
Crystalline Samples will be held at the Stanford Synchrotron Radiation
Laboratory from
13:00 March 11th to 13:00 March 13th 2010.
This series of workshops was originally concerned with the effects of
radiation damage
Dear All,
I am looking for def.site file for HKL2000 used in ESRF-BM14 beam line. We
collected the data using MAR 225 CCD detector. The following link does not seem
to work for me.
http://www.esrf.fr/exp_facilities/BM14/runexperiment/bm14-def.site
We need this file to process our data in the
Dear All,
I got the file. Thanks a lot for the same. I apologize for posting a 'non-CCP4'
question to the CCP4BB.
With regards
S.Karthikeyan
Dear All,
I am looking for def.site file for HKL2000 used in ESRF-BM14 beam line. We
collected the data using MAR 225 CCD detector. The following
Dear List,
I'm planning to migrate soon from Red Hat Linux 7.0 on an HP xw6000 workstation
with dual Xeon processor.
Please, any suggestion for the best Linux flavour to get the most out of
today's crystallographic software? I've seen that both Ubuntu and Fedora are
quite common.
I've used both Fedora (RH 9 through Fedora 8) and
Ubuntu 9.04 for crystallogrpahy. Both are fine distros. Ubuntu was a
little better working out of the box with all the hardware, and
maintenance of the restricted Nvidia drivers is simpler. For some
reason, Wine compatibility was better, too.
Dear Claudia,
I use Ubuntu and I am happy with it, cannot say if it is
the best. It is relatively easy to maintain which is what you
want.
As for HD, try and determine how much space a typical project
would need and how many concurrent projects there might be. Data
from images would be
I've just set up two home computers for crystallographic work. I decided
to play around, and set one up with Ubuntu and the other one with Fedora
core 11. Both did OK but I'd say that I had to perform marginally less
tweaking with Fedora than with Ubuntu.
As far as disk space - you can cram
On Aug 24, 2009, at 7:49 AM, ar...@xtals.org wrote:
my two cents: don't get involved in nerdy discussions
Here's a useful summary:
http://bandcamp.tv/linux-demotivators/
-Original Message-
From: owner-ccp...@jiscmail.ac.uk [mailto:owner-ccp...@jiscmail.ac.uk]
On
Behalf Of Adam Ralph
Sent: 24 August 2009 15:25
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] Linux flavour and hard disks
You also need a swap partition,
this should be 2 to 3 times the
Hi
This is probably an obvious one but I'm having trouble getting Phaser to
run. It simply says the status is starting and will not give me more
information in the log file. I suspect the problem has to do with the F
and Sigma F values but I am not sure what to assign them as?
Any help would
Hi,
is the problem related to one of the problems listed below?
(taken from the CCP4i troubleshooting page
http://www.ccp4.ac.uk/ccp4i/trouble_shooting.html ):
If I recall correctly, once I saw similar behaviour when my
$CCP4I_TCLTK/tclsh was pointing to an incorrect directory.
I hope that
Hi Claudia,
There is an option that has not been mentioned yet and has a very obvious
advantage: CentOS. I am mentioning this because it is identical in
functionality to Red Hat and therefore it will take the least of your time to
move to a new system. We like CentOS because it is derived
Dear All,
Could someone please suggest me program(s) to get the shape complementarity
index for a protein complex structure of mine?
Many thanks
--
Amit Sharma, Ph.D. Research Associate, Department of Biology,
University of York, YO10 5DD UK
amit sharma wrote:
Dear All,
Could someone please suggest me program(s) to get the shape
complementarity index for a protein complex structure of mine?
Many thanks
sc, by Michael Lawrence:
http://www.ccp4.ac.uk/dist/html/sc.html
(included in ccp4 distro)
Hi, Sylvia:
Did you also install Phenix in your machine? Phenix contains another
version of phaser and will alias phaser to the phaser in Phenix. Try
to type which phaser. If your command is not aliased to the phaser in
your ccp4 version. Just use runview com file in the ccp4 and type in
the
On Mon, Aug 24, 2009 at 12:30 PM, Joseph Ho
j...@medusa.bioc.aecom.yu.eduwrote:
Did you also install Phenix in your machine? Phenix contains another
version of phaser and will alias phaser to the phaser in Phenix.
No, it will be called phenix.phaser. The Phenix environment scripts
Dear All:
Please see attached is an ad for our AKTAprime plus FPLC system which is only 2 years old, used a dozen times and in excellent condition. Thanks,
Natalie Roy
FPLC for sale.doc
Description: MS-Word document
CCP4bbers,
I am trying to do a restrained refinement in refmac using a rhenium
tricarbonyl (RTC) fragment similar to the one in PDB 1I53. My
understanding of how to proceed is to take the PDB description of the
file, read it into sketcher, and then run libcheck to create the
various cif and
Not sure this is the right place to ask, but...
I'm trying to chain some ccp4 programs together via a script.
It creates temporary files with arbitrary names based on the process id.
The problem is that when I try to pass one of these files to the
next program in the chain, as in:
tlsanl
On Aug 24, 2009, at 8:32 AM, William G. Scott wrote:
On Aug 24, 2009, at 7:49 AM, ar...@xtals.org wrote:
my two cents: don't get involved in nerdy discussions
Here's a useful summary:
So it's freebsd then?
Hi everyone,
Thank you for all the replies to the ad I posted about the FPLC for sale, we
are asking $11,000 CAD for the system and all of its components, but we are
willing to negotiate price. The UV lamp is also 2 years old but only been used
about a dozen times. Shipping will be
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