[ccp4bb] AW: [ccp4bb] Fwd: Final result help

2013-08-13 Thread Herman . Schreuder
Dear Monica, Having gone through all the efforts of purifying the protein, growing crystals, collecting and processing the data, running molecular replacement (asuming you intend to solve the structure that way) is trivial and you should try it in any case. But: Your data does not look great.

Re: [ccp4bb] RSCC

2013-08-13 Thread Robbie Joosten
Dear Monica, The CCP4 program EDSTATS will give you the number you need, without any hassle. Give it a try. Cheers, Robbie Sent from my Windows Phone Van: MONICA MITTAL Verzonden: 13-8-2013 7:57 Aan: CCP4BB@JISCMAIL.AC.UK Onderwerp: [ccp4bb] RSCC Dear all I

[ccp4bb] His - Hs

2013-08-13 Thread Bernhard Rupp
Dear Developers, incidentally I stumbled upon a discrepancy between refmac and phenix I cannot quite explain. Wondering I am, how programs add riding hydrogen atoms to histidines. /end_yoda from what I see, I gather that protonation is always assumed (4 H-sticks protruding from the

[ccp4bb] Postdoc and RA position at Zewail University, Cairo

2013-08-13 Thread fareed aboul-ela
*Postdoctoral and Research Assistant (2 positions) in Structural Biology at Zewail City for Science and Technology* Zewail City is initiating a research program in Biophysics and Structural Biology focusing on protein and nucleic acid structure and nucleic acid-protein and nucleic acid-small

[ccp4bb] 5CM

2013-08-13 Thread Gracie
Dear CCP4BB, I am working with 5’ methyl cytosine (5CM) double stranded methylated DNA. However, when I try to run refinement, it could not identify the 5CM in the PDB file. Is there any way to do so as I already tried to modify the PDB file but it still shows error and the run was terminated.

[ccp4bb] Research fellow positions

2013-08-13 Thread haiwei song
We are seeking two self-motivated and passionate postdoctoral research fellows to study structural and functional analysis of proteins involved in RNA metabolism and the Hippo signalling pathway. Candidates with an interest in the development of small molecules to target the Hippo pathway for

[ccp4bb] Rigaku Crystallization Webinar: 8am PDT, September 4th, 2013, Dr. Allan D'Arcy

2013-08-13 Thread Jian Xu
Hello All, I'm delighted to announce that Dr. Allan D'Arcy will give a scientific presentation in Rigaku Crystallization Webinar on September 4th, 2013, 8:00am Pacific Daylight Time. The webinar is free to attend and all are welcome. You can register it through our web page,

Re: [ccp4bb] RSCC

2013-08-13 Thread AMIT
Hi Monica, You can use O (graphical program using rsr command) and CNS for Real space correlation coefficient for the ligand. Amit. On Tue, Aug 13, 2013 at 1:47 AM, MONICA MITTAL monica.mitta...@gmail.comwrote: Dear all I am new to crystallography. I recently solved a