[ccp4bb] Xtriage anomalous signal measurement- mosflm data processing

2018-03-21 Thread Manoj Saxena
Hi all, I have a dataset for which I got the .sca file from a collaborator and I am trying to look at the strength of the anomalous signal. Looking at archives in the CCP4bb I found many people suggesting using the Chi**2 values using ScaLAPACK using HKL2000. However, at the moment, I have access

[ccp4bb] Research Specialist/Cryo-Electron Microscopist, UT Southwestern Medical Center

2018-03-21 Thread Diana Tomchick
Research Specialist/Cryo-Electron Microscopist A Cryo-Electron Microscopist position is available in the Structural Biology Laboratory at UT Southwestern Medical Center in Dallas, Texas. The person selected for this position will apply single particle cryo-electron microscopy to the study of

[ccp4bb] Scalable and Reproducible Structural Bioinformatics Workshop & Hackathon 2018

2018-03-21 Thread Peter Rose
We are pleased to announce the second MMTF workshop: *Scalable and Reproducible Structural Bioinformatics Workshop & Hackathon 2018. *This workshop will be held May 7 – 9, 2018 at the University of California, San Diego and hosted by the Structural Bioinformatics Laboratory at the San Diego

[ccp4bb] PDBe Data Enrichment and Integration Coordinator

2018-03-21 Thread John Berrisford
PDBe are looking to recruit a Data Enrichment and Integration Coordinator to help the PDBe team stay abreast of and meet the changing needs of the broad scientific community through enrichment, integration, and quality improvement of biomacromolecular structure data and tools for its delivery.

[ccp4bb] PDBe Scientific Programmer / Bioinformatician

2018-03-21 Thread John Berrisford
PDBe are looking for a bioinformatician to work on the wwPDB validation pipeline for structure data. The wwPDB validation pipeline is a critical component of OneDep data deposition and biocuration system. The candidate will be involved in implementing better validation metric for bound

Re: [ccp4bb] How to fit DNA in density map of protein-DNA complex

2018-03-21 Thread Nicolas FOOS
Hi Madhusudhan, As already mentioned, coot is perfectly adapted. But if you have a pretty long DNA strand, maybe you can design an "artificial" DNA strand with http://structure.usc.edu/make-na/server.html It generated different form of DNA (B, Z and A). You can use your known sequence and