Re: [ccp4bb] Easy/Silly question

Yes, MAL was obsoleted about 2 years ago. Cheers Nigel --- Nigel W. Moriarty Building 33R0349, Molecular Biophysics and Integrated Bioimaging Lawrence Berkeley National Laboratory Berkeley, CA 94720-8235 Phone : 510-486-5709 Email : nwmoria...@lbl.gov Fax : 510-486-5909 Web :

Re: [ccp4bb] Easy/Silly question

It's GLC otherwise known as 4-ortho-alpha-D-Glucopyranosyl-D-glucose. See PDB ID 1ANF also https://en.wikipedia.org/wiki/Maltose [https://upload.wikimedia.org/wikipedia/commons/thumb/6/6a/Maltose2.svg/1200px-Maltose2.svg.png] Maltose -

Re: [ccp4bb] Easy/Silly question

On 01/07/2022 04:50, Joel Tyndall wrote: Hi folks, I frustratingly cant find “maltose” as a ligand in the pdb or ccp4 database. Does any one have the code for the ligand? Surely its been used before. In Coot: File -> Search Monomer Library -> "maltose" -> Search -> MAL

[ccp4bb] Easy/Silly question

Hi folks, I frustratingly cant find “maltose” as a ligand in the pdb or ccp4 database. Does any one have the code for the ligand? Surely its been used before. Thanks in advance J Joel Tyndall | BSc(Hons) PhD Associate Professor in Medicinal Chemistry School of Pharmacy | He Rau Kawakawa

[ccp4bb] CryoEM staff microscopist and scientist positions available - SEMC, NYC, USA

Dear all, The Simons Electron Microscopy Center (semc.nysbc.org) at the New York Structural Biology Center is seeking to hire experienced microscopists to join our cryoEM operations team. Be a part of the group that maintains and operates soon to be 16 electron microscopes (including 7xTitan

[ccp4bb] qRTView 1.16 ccp48.0.002

[cid:image001.png@01D88C6D.93B66E00] I get this error vuiewing the results inqRTView. My ccp4 in running on windows 10. Any comments/suggestions? Executive Director, Structural Biology, Biocryst Pharmaceuticals. CONFIDENTIALITY NOTICE This email, including any attachments, may contain

Re: [ccp4bb] CCPBioSim Industry Talk

Thanks all for the notification it's not on. I guess I'll start my day an hour earlier or just watch the sunrise. Cheers Nigel --- Nigel W. Moriarty Building 33R0349, Molecular Biophysics and Integrated Bioimaging Lawrence Berkeley National Laboratory Berkeley, CA 94720-8235 Phone :

Re: [ccp4bb] CCPBioSim Industry Talk

Is this meeting still proceeding? My link doesn't work. Cheers Nigel --- Nigel W. Moriarty Building 33R0349, Molecular Biophysics and Integrated Bioimaging Lawrence Berkeley National Laboratory Berkeley, CA 94720-8235 Phone : 510-486-5709 Email : nwmoria...@lbl.gov Fax : 510-486-5909

Re: [ccp4bb] Unidentified electron density

Could it be Tris? Mark J van Raaij Dpto de Estructura de Macromoleculas, lab 20B Centro Nacional de Biotecnologia - CSIC calle Darwin 3 E-28049 Madrid, Spain tel. +34 91 585 4616 (internal 432092) Section Editor Acta Crystallographica F https://journals.iucr.org/f/

Re: [ccp4bb] Unidentified electron density

Hi Sayan Looks interesting. My first thought was a metal ion with attendant waters, but it doesn't look quite right for Trigonal co-ordination - maybe trigonal bi-pryamidal with a missing/poorly defined ligand above the plane in image 1? A couple of questions to help refine the search: 1.

Re: [ccp4bb] Unidentified electron density

Dear Sayan, It's a little hard to see from the images, but there seems to be continuous density to the aspartate indicating a covalent adduct. Perhaps it would be best to extract a crystal and run it through mass spec to get an exact mass on the adduct (and so its chemical formula)? Others who