Chris,
The hydrogens are at 0 occupancy so their positions are not
refined...the other atoms at non-zero occupancy do move leaving the Hs
behind..set the hydrogens to non-zero occupancy (eg. 0.01).
HTH,
Iain
CK wrote:
Hi all,
I am refining a structure that contains RNA. I've added
Also, does the resolution of your data warrant including the hydrogens
in the model ? Can you actually see them ?
You can add them in their riding positions, which may help stablise
your refinement, but not write them out to the coordinate file (uncheck
and output to coordinate file in the
Hi Scott,
Is X11 running correctly ? (check if CCP4i launches)..it should work out
the box in F8.
Do you have the desktop effects switched on (wobbly windows etc.) ? At
least earlier versions of Coot wouldn't launch properly under Fedora
while desktop effects/Compiz/Beryl etc. were
