Bug#1063191: libcifpp-data: Incorrect URL in update-libcifpp-data script

ian-med-packaging mailing list debian-med-packag...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging -- Maarten L. Hekkelman http://www.hekkelman.com/

Bug#1050949: Acknowledgement (routine-update had my rules for lunch)

sent to the package maintainer(s): Debian Med Packaging Team If you wish to submit further information on this problem, please send it to 1050...@bugs.debian.org. Please do not send mail to ow...@bugs.debian.org unless you wish to report a problem with the Bug-tracking system. -- Maarten L

Bug#1050949: routine-update had my rules for lunch

Package: routine-update Severity: important Dear Maintainer, For my debian package I used the wiki page on SphinxDocumentation as inspiration and added the following lines to my rules file: override_dh_auto_build: export http_proxy=127.0.0.1:9 override_dh_auto_build: export

Bug#1025778: libnewuoa breaks libpdb-redo autopkgtest: pdb-redo-example (Failed)

) Errors while running CTest Output from these tests are in: /tmp/autopkgtest-lxc.qdh1lkps/downtmp/autopkgtest_tmp/build/Testing/Temporary/LastTest.log Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely. autopkgtest [15:19:23]: test run-unit-test -- Maarten L. Hekkelman http://www.hekkelman.com/

Bug#1024893: libcifpp: Requesting transition slot

Source: libcifpp Severity: normal Dear Maintainer, libcifpp and libpdb-redo are both in experimental. I've prepared the packages depending on them and am now requesting a time slot to take the following transition steps. regards, -maarten hekkelman

Bug#1024622: ITP: libmcfp -- A header-only C++ argv and configuration parsing library

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" X-Debbugs-Cc: debian-de...@lists.debian.org * Package name: libmcfp Version : 1.2.2 Upstream Author : Maarten L. Hekkelman * URL : http://github.com/mhekkel/libmcfp * License : BS

Bug#1024144: ITP: libcfp -- A header-only C++ argv and configuration parsing library

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" X-Debbugs-Cc: debian-de...@lists.debian.org, maar...@hekkelman.com * Package name: libcfp Version : 1.2.0 Upstream Author : Maarten L. Hekkelman * URL : https://github.com/mhekkel/libcfp.git

Bug#989051: [Debian-med-packaging] Bug#989051: mrc: FTBFS on hppa - obj/mrc_rsrc.o created with wrong OS/ABI

Maarten, Maarten L. Hekkelman, on 2021-09-02: I found the underlying problem, apparently the ABI field of the ELF header should contain a flag indicating it is a Linux executable. In order to set this flag properly, I need to find out various things and perhaps it is easiest to try to figure out

Bug#989051: mrc: FTBFS on hppa - obj/mrc_rsrc.o created with wrong OS/ABI

NGUAGE not set Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) -- Maarten L. Hekkelman http://www.hekkelman.com/

Bug#987436: libcifpp: [INTL:pt_BR] Brazilian Portuguese debconf templates translation

and it is tested with msgfmt and podebconf-display-po. Kind regards. -- Maarten L. Hekkelman http://www.hekkelman.com/

Bug#979314: libccp4: The endianness check in ccp4_sysdep.h is incorrect assuming powerpc is always big endian

Source: libccp4 Version: 6.5.1-4 Severity: grave Tags: patch upstream Justification: renders package unusable X-Debbugs-Cc: maar...@hekkelman.com -- System Information: Debian Release: bullseye/sid APT prefers unstable APT policy: (500, 'unstable') Architecture: ppc64el (ppc64le) Kernel:

Bug#976849: ITP: density-fitness -- Calculates per-residue electron density scores real-space R, real-space correlation coefficient, EDIAm, and OPIA

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" * Package name: density-fitness Version : 1.0.0 Upstream Author : Maarten L. Hekkelman * URL : https://github.com/PDB-REDO/density-fitness * License : BSD-2-Clause Programmi

Bug#976727: ITP: libpdb-redo -- Library containing shared code for the various programs in project PDB-REDO

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" * Package name: libpdb-redo Version : 1.0.0 Upstream Author : Maarten L. Hekkelman * URL : https://github.com/PDB-REDO/libpdb-redo * License : BSD-2-Clause Programming Lang: C++ D

Bug#976627: libcifpp: [INTL:de] initial German debconf translation

Thank Helge, I've placed the file where it is supposed to be, will be included at the next check-in. regards, -maarten Op 06-12-2020 om 05:49 schreef Helge Kreutzmann: Package: libcifpp Version: 1.0.0-3 Severity: wishlist Tags: patch l10n Please find the initial German debconf translation

Bug#976272: ITP: libnewuoa-cpp -- C++ implementation of the NEWUOA algorithm

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" * Package name: libnewuoa-cpp Version : 0.1.0 Upstream Author : Roman Siromakha * URL : https://github.com/elsid/newuoa-cpp * License : MIT Programming Lang: C++ Descripti

Bug#975691: ITP: tortoize -- Application to calculate ramachandran z-scores.

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" * Package name: tortoize Version : 2.0.0 Upstream Author : Maarten L. Hekkelman * URL : http://github.com/PDB-REDO/tortoize * License : BSD-2-Clause Programming Lang: C++ D

Bug#975526: ITP: cif-tools -- Suite of tools to manipulate, validate and query mmCIF files

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" * Package name: cif-tools Version : 1.0.0 Upstream Author : Maarten L. Hekkelman * URL : http://github.com/PDB-REDO/cif-tools * License : BSD-2-Clause Programming Lang: C++ D

Bug#975446: libzeep: FTBFS against boost_1.74

/mod2/libzeep-5.0.2/doc' up to the root at '/usr/bin/b2' Please consult the documentation at 'https://boostorg.github.io/build/'. Could you please have a look? Thanks Anton Am So., 22. Nov. 2020 um 21:22 Uhr schrieb Maarten L. Hekkelman : Hi, The bug report is for libzeep version 5

Bug#975446: libzeep: FTBFS against boost_1.74

/a8G23cdAu Bite4zw/29R5ekDUIvZcLLUSTVYfArKd1gMeRbVQFx9Y/AcFBC1/eZwqeiQFKmZv c1PwFhB9bl54jDqS/mb7c85uhzt2LEbEeLrzo69TaUxjo1/1vQCvZa2FMn5uZgBF aQwH4QSlL8Qh1zd3DW6DpQUzC4hg9TWFH/xIulFfuS46i2vD6UUDZYO/lBsw9Bod a5Sgqn6aeKSZs2StgSOf8HFF067rSOYbC3oaDO9/7xBmNe8FHjYLV27mFr6+Sotu OObqY7WdDP4= =ljID -END PGP SIGNATURE----- -- Ma

Bug#974973: ITP: libcifpp -- A library for creating and manipulating mmCIF and PDB files containing macro molecular structure information

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" * Package name: libcifpp Version : 1.0.0 Upstream Author : Maarten L. Hekkelman * URL : http://github.com/PDB-REDO/libcifpp * License : BSD-2-Clause Programming Lang: C++ D

Bug#974895: ftp.debian.org: MRS should be updated to support the new libzeep library

Package: ftp.debian.org Severity: serious Tags: ftbfs Justification: fails to build from source (but built successfully in the past) MRS is an information retrieval system, used to index terabytes of text based databanks on a single machine. Mostly used in the medical and biological world. The

Bug#974016: mrs: FTBFS with libzeep-dev 5.0.0-1: "Checking for libzeep...libzeep is not installed"

: Hi Marten On 2020-11-10 07:42:45 +0100, Maarten L. Hekkelman wrote: ... Sorry, long story. To make it short. - Keep mrc, no problem there - Upgrade libzeep to version 5 Thanks for the detailed explanation. The first two steps are almost done The current versions of mrc and libzeep should

Bug#973526: FTBFS due to SIGABRT while running HTTP server tests, bug #973526

Op 10-11-2020 om 16:21 schreef Andrey Rahmatullin: Running 7 test cases... started daemon at port 5923 terminate called after throwing an instance of 'boost::wrapexcept' what(): resolve: Host not found (authoritative) Looks like it tries to resolve something, and that usually implies

Bug#974016: mrs: FTBFS with libzeep-dev 5.0.0-1: "Checking for libzeep...libzeep is not installed"

there - Upgrade libzeep to version 5 - Kick out mrs until it is upgraded to use libzeep 5 regards, -maarten Op 09-11-2020 om 20:49 schreef Andreas Tille: Hi Maarten, On Mon, Nov 09, 2020 at 07:22:30PM +0100, Maarten L. Hekkelman wrote: I'm sorry, but mrs as it is currently in Debian is not compatible

Bug#974016: mrs: FTBFS with libzeep-dev 5.0.0-1: "Checking for libzeep...libzeep is not installed"

debian/rules are not effective because of the earlier override_dh_auto_configure target. But I didn't actually test any of this. Hope this helps, -- Maarten L. Hekkelman Cataloniëstraat 3 6663NJ Lent http://www.hekkelman.com/

Bug#970087: ITP: mrc -- resource compiler to store data in ELF object files

Package: wnpp Severity: wishlist Owner: "Maarten L. Hekkelman" * Package name: mrc Version : 1.2.2 Upstream Author : Maarten L. Hekkelman * URL : http://github.com/mhekkel/mrc * License : BSD-2-Clause-FreeBSD Programming Lang: C++ D

Bug#712679: ITP: mrs -- Complete Information Retrieval System for Biomedical databanks

Package: wnpp Severity: wishlist Owner: Maarten L. Hekkelman m.hekkel...@cmbi.ru.nl * Package name: mrs Version : 6.0.1 Upstream Author : Maarten L. Hekkelman * URL : http://mrs.cmbi.ru.nl/ * License : Boost Programming Lang: C++, Perl, JavaScript

Bug#671481: ITP: libzeep -- A C++ library providing a validating XML parser, XML DOM tree implement

Package: wnpp Severity: wishlist Owner: Maarten L. Hekkelman maar...@cmbi.ru.nl * Package name: libzeep Version : 2.9.0 Upstream Author : Maarten L. Hekkelman m.hekkel...@cmbi.ru.nl * URL : http://www.cmbi.ru.nl/libzeep * License : Boost-1.0 Programming Lang

Bug#609541: ITP: libzeep -- XML Library for SOAP servers written in C++

Package: wnpp Severity: wishlist Owner: Maarten L. Hekkelman m.hekkel...@cmbi.ru.nl * Package name: libzeep Version : 2.0.1 Upstream Author : Maarten L. Hekkelman m.hekkel...@cmbi.ru.nl * URL : http://www.cmbi.ru.nl/libzeep/ * License : Boost Programming