Bug#756780: [Help] Need help for architecture specific code (Was: Bug#756780: bowtie: FTBFS almost everywhere)

2014-08-15 Thread Andreas Tille
Hi, thanks for the hints which I forwarded upstream. While I've got no explicit answer about this a new version was released which now even fails to build on amd64 but with a different error. My guess is that this is caused since upstream includes a code copy of an older version of seqan-dev

Bug#756780: [Help] Need help for architecture specific code (Was: Bug#756780: bowtie: FTBFS almost everywhere)

2014-08-04 Thread Andreas Tille
Hi, on arm*, powerpc, sparc and s390x architectures the build problem is: third_party/cpuid.h: In constructor 'EbwtTStr::Ebwt(int, int32_t, int32_t, int32_t, int32_t, int32_t, const string, bool, bool, uint32_t, uint32_t, uint32_t, int, std::vectorFileBuf*, std::vectorRefRecord,

Bug#756780: [Help] Need help for architecture specific code (Was: Bug#756780: bowtie: FTBFS almost everywhere)

2014-08-04 Thread Paul Wise
On Mon, Aug 4, 2014 at 3:48 PM, Andreas Tille wrote: third_party/cpuid.h No idea about this problem but here is what I could figure out based on the filename and the errors, using packages.d.o, codesearch.d.n and a quick look at wikipedia. third_party/cpuid.h looks like an outdated copy of the

Bug#756780: [Help] Need help for architecture specific code (Was: Bug#756780: bowtie: FTBFS almost everywhere)

2014-08-04 Thread Andreas Tille
Hi Ben, I recently updated the bowtie package in Debian to version 1.0.1. Unfortunately this package failed to build on most of the architectures in Debian. When discussion this issue I've got the following response which I would like to bring to your attention hereby. On Mon, Aug 04, 2014 at