Bug#390640: ftp.debian.org: removal of package libpolyxmass and libpolyxmass-dev (any version)

Package: ftp.debian.org Severity: normal Hello, as the author of the libpolyxmass package, I ask that that package be removed from the distribution. Indeed, the library libpolyxmass is no longer used in the GNU polyxmass project which I author. Sincerely, Filippo Rusconi GNU polyxmass author

Bug#390004: tex-common fails to install trying to overwrite `/usr/share/texmf/doc'

Package: tex-common Version: 0.28 Severity: grave Justification: renders package unusable tex-common_0.29_all.deb fails to install with error below. Installation of other tetex components proceeds normally. dpkg: error processing /var/cache/apt/archives/tex-common_0.29_all.deb (--unpack):

Bug#349281: plone-site: adduser command fails

-working things yet as I'm discovering the whole Zope/Plone stuff :) Thank you for your help ! Ciao Filippo Rusconi -- System Information: Debian Release: testing/unstable APT prefers testing APT policy: (500, 'testing'), (500, 'stable') Architecture: i386 (i686) Shell: /bin/sh linked

Bug#451968: texlive-formats-extra: fails to install after successfully building *some* formats

Package: texlive-formats-extra Version: 2007-3 Severity: grave Justification: renders package unusable # apt-get install texlive-formats-extra gives the output below: 8~ Unpacking replacement texlive-formats-extra ... dpkg: error processing

Bug#217094: Ongoing efforts with packaging of GNU polyxmass

by a Debian Developer. Sincerely, Filippo Rusconi Author/Maintainer GNU polyxmass (www.polyxmass.org) -- System Information: Debian Release: 3.1 APT prefers testing APT policy: (500, 'testing') Architecture: i386 (i686) Kernel: Linux 2.6.8-fr8 Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8

Bug#301436: comerr-dev: cannot install while libcomerr2 1.35-8 is installed

packages Filippo Rusconi -- System Information: Debian Release: 3.1 APT prefers testing APT policy: (500, 'testing') Architecture: i386 (i686) Kernel: Linux 2.6.8-fr8 Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject

Bug#296935: Setting up of webcalendar fails

that webcalendar failed to be setup (see above) Cheers, Filippo Rusconi -- System Information: Debian Release: 3.1 APT prefers testing APT policy: (500, 'testing') Architecture: i386 (i686) Kernel: Linux 2.6.8-fr8 Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Versions

Bug#296935: Setting up of webcalendar fails

Hello, thanks for answering the bug report. I did as you requested, and then tried an install of the package. This is the output: Setting up webcalendar (0.9.45-3) ... + Version=0.9.45-1 + set -e + . /usr/share/debconf/confmodule ++ '[' '!' '' ']' ++ PERL_DL_NONLAZY=1 ++ export PERL_DL_NONLAZY

Bug#296935: Setting up of webcalendar fails

: webcalendar is broken or not fully installed Cheers, Filippo -- Please, deactivate the HTML mail feature: use simple text mail for me. Filippo Rusconi, PhD - CNRS researcher - key C78F687C @ pgp.mit.edu Author of ``GNU polyxmass'' at http://www.polyxmass.org USM0503 MNHN - UMR5153 CNRS

Bug#320839: polyxmass-bin: View / window list / Report to Clipboard: abort (failed assertion)

Hi. Thanks for the bug report. The source is fixed in the debian arch repository: arch.debian.org/arch/polyxmass/polyxmass-proj. Cheers, Filippo On Mon, Aug 01, 2005 at 11:26:29PM +0200, Lionel Elie Mamane wrote: Package: polyxmass-bin Version: 0.8.8-1 Severity: normal Launch polyxmass.

Bug#351773: pybliographer: failure to either save or load bib (BibTeX) file

Package: pybliographer Version: 1.2.6.2-1 Severity: grave Justification: renders package unusable Hello, 1. When starting pybliographic, I get the ususal window OK. 2. When starting pybliographic with a bib filename, I get this: $ This is Pybliographic 1.2.6.2 [Python 2.3.5, Gtk 2.8.10, PyGTK

Bug#351773: fixed by going back to python-bibtex_1.2.1-1_i386.deb

feature: use simple text mail for me. Filippo Rusconi, PhD - CNRS researcher - key C78F687C @ pgp.mit.edu Author of ``GNU polyxmass'' at http://www.polyxmass.org http://www.google.com/search?num=50hs=Qqvhl=ensafe=offq=rusconi+filippo USM0503 MNHN - UMR5153 CNRS - U565 INSERM 57, rue Cuvier

Bug#384051: ekiga: Ekiga hangs up (process sleeping) when selecting the sound manager

Package: ekiga Version: 2.0.2-1 Severity: grave Justification: renders package unusable The Ekiga configuration wizard goes on well up to the step about detecting the sound device. It detects correctly that I'm using the ALSA system, but when I hit Next it freezes. Nothing else to do than

Bug#384051: follow-up

.dfsg-1_i386.deb) ... Setting up libpt-plugins-avc (1.10.1.dfsg-1) ... Setting up libpt-plugins-dc (1.10.1.dfsg-1) ... Setting up libpt-plugins-oss (1.10.1.dfsg-1) ... Setting up libpt-plugins-v4l2 (1.10.1.dfsg-1) ... But the problem seems to persist. Sincerely, Filippo Rusconi -- Author

Bug#384051: follow-up, news

and re-execute, which goes again in wizard configuration mode, which I cancel and at that point I finally have access to the ekiga's main window. Anyway, it seems that it works. Cheers, Filippo Rusconi -- Filippo Rusconi, PhD - CNRS researcher - key C78F687C @ pgp.mit.edu Author of ``GNU polyxmass

Bug#395490: gcalctool: exponential values cannot be entered correctly

should give -1.2e-7, that is -0.0012 does not work either. That is a SIGNIFICANT problem. Sincerely, Filippo Rusconi -- System Information: Debian Release: testing/unstable APT prefers testing APT policy: (500, 'testing') Architecture: i386 (i686) Shell: /bin/sh linked to /bin/bash

Bug#525675: ITP: mmass a Python-based mass spectrometry tool for proteomics

Package: wnpp Severity: wishlist -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Description: Python-based mass spectrometry tool for proteomics mMass is a free mass spectral data viewer/analyzer in which the following proteomics-related tasks can be performed: . - Open raw text, mzXML and

Bug#608549: ktimetracker: The /usr/bin/karm binary has no man page.

Package: ktimetracker Version: 4:4.4.7-2 Severity: minor As a KDE user, I stumbled into the karm binary which has no man page. Thanks -- System Information: Debian Release: squeeze/sid APT prefers testing APT policy: (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux

Bug#611142: massxpert: Program crashes when clicking left of first monomer vignette

Package: massxpert Version: 2.4.1-1 Severity: grave Tags: upstream Justification: renders package unusable Sending bug report to myself. When clicking left of the first monomer vignette the program crashes. Presumably because of a failed array bound checking. -- System Information: Debian

Bug#611142: [Debichem-devel] Bug#611142: massxpert: Program crashes when clicking left of first monomer vignette

version. Is the version in squeeze (2.3.6) affected as well? I'll investigate that. If so, then I'll ask if the new version might go there. I'll turn to you to ask for guidelines for this step, if you do not mind. Thanks, Best regards, Filippo -- Filippo Rusconi, PhD - CNRS

Bug#611142: [Debichem-devel] Processed: tagging 611142

Hello Julien, On Tue, Feb 01, 2011 at 10:30:21PM +0100, Julien Cristau wrote: On Tue, Feb 1, 2011 at 17:54:09 +, Debian Bug Tracking System wrote: Processing commands for cont...@bugs.debian.org: tags 611142 + squeeze Bug #611142 {Done: Filippo Rusconi rusconi-deb...@laposte.net

Bug#611142: [Debichem-devel] Bug#611142: Bug#611142: Processed: tagging 611142

is necessary in the few cases where whether a bug affects a release depends on external factors, not a fix in the package. OK, understood. Thanks for clearing that up. +1 :-) Best regards, Filippo -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert

Bug#570230: avogadro: Segmentation fault upon importing PDB data from a PDB code

Package: avogadro Version: 1.0.0-2 Severity: important Greetings, Avogadro crashes when importing (File-Import-Fetch from PDB) with PDB code 3B75 (Crystal Structure of Glycated Human Haemoglobin DOI:10.2210/pdb3b75/pdb). The console only shows this: QStackedLayout::setCurrentWidget: Widget

Bug#570230: [Debichem-devel] Bug#570230: avogadro: Segmentation fault upon importing PDB data from a PDB code

Hello Michael, On Wed, Feb 17, 2010 at 03:47:24PM +0100, Michael Banck wrote: forwarded 570230 https://sourceforge.net/tracker/?func=detailaid=2953568group_id=165310atid=835077 tags 570230 +confirmed thanks hi, On Wed, Feb 17, 2010 at 02:37:10PM +0100, Filippo Rusconi wrote

Bug#529399: ITP: cb2bib -- extract bibliographic references from various sources

Package: wnpp Severity: wishlist Owner: Filippo Rusconi rusconi-deb...@laposte.net -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 * Package name: cb2bib Version : 1.2.3 Upstream Author : Pere Constans const...@molspaces.com * URL : http://www.molspaces.com/cb2bib

Bug#529399: ITP: cb2bib -- extract bibliographic references from various sources

On Tue, May 19, 2009 at 10:02:08AM +0200, Norbert Preining wrote: On Di, 19 Mai 2009, Filippo Rusconi wrote: cb2bib is a program to extract bibliographic references from unformatted and non standard sources, like: - email alerts; - journal Web pages; - and most interestingly

Bug#529399: ITP: cb2bib -- extract bibliographic references from various sources

On Tue, May 19, 2009 at 10:39:49AM +0200, Norbert Preining wrote: On Di, 19 Mai 2009, Filippo Rusconi wrote: My pleasure :) and the upstream developer is very collaborative. Always good to hear. If there is a TeX part in it and you need some help/checking just let me know. Thanks

Bug#515738: RM: polyxmass -- ROM; no more developed upstream, better replacement prepared: massxpert (same author)

better features than GNU polyxmass. I am also putting final touches to a massxpert package for Debian GNU/Linux. Kind regards, Filippo Rusconi -- System Information: Debian Release: 5.0 APT prefers testing APT policy: (500, 'testing') Architecture: i386 (i686) Kernel: Linux 2.6.22-fr-20071024

Bug#581654: /home/rusconi/devel/translations/ampache/ampache_3.5.4-2_fr.po: French debconf templates translation

, 2007. # Filippo Rusconi rusconi-deb...@laposte.net, 2010. msgid msgstr Project-Id-Version: ampache\n Report-Msgid-Bugs-To: ampa...@packages.debian.org\n POT-Creation-Date: 2010-05-01 16:46-0500\n PO-Revision-Date: 2010-05-05 00:09+0200\n Last-Translator: Filippo Rusconi rusconi-deb...@laposte.net\n

Bug#582632: libpng12-0: Fails to open a png file that has worked for ages

Package: libpng12-0 Version: 1.2.43-1 Severity: important Tags: upstream Greetings, when trying to load a png file that has been successfully loaded for years, I encountered this error: libpng warning: Ignoring bad adaptive filter type libpng warning: Ignoring bad adaptive filter type (3 more

Bug#579796: ITP: othman -- electronic Quran browser in Python

accompanied by the definite article in both languages, although I do not know if the article should be necessarily be capitalized. -- Best regards, Filippo -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert'' at http://www.massxpert.org

Bug#570230: [Debichem-devel] Bug#570230: Bug#570230: avogadro: Segmentation fault upon importing PDB data from a PDB code

, unfortunately, the 2.2 code is different at this place. So a backport is non-trivial (at least for me after looking at it for a minute); if somebody wants to take a look, be our guest. I won't have much time either... Best regards, Filippo -- Filippo Rusconi, PhD - CNRS

Bug#600752: [Debichem-devel] Bug#600752: mmass totally outdated

/listinfo/debichem-devel -- Best regards, Filippo -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact

Bug#599909: emacs23: emacs uses up to 25% cpu while resting

, 0) = 0 (Timeout) select(18, [3 4 11 13 15 16 17], NULL, NULL, {0, 406807}) = 1 (in [11], left {0, 406805}) kill(2890, SIGIO) = 0 Thank you Filippo Rusconi -- System Information: Debian Release: squeeze/sid APT prefers testing APT policy: (500, 'testing') Architecture

Bug#527141: ITP: lutefisk -- Software for the de novo interpretation of peptide CID spectra

Package: wnpp Severity: wishlist Owner: Filippo Rusconi rusconi-deb...@laposte.net -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 * Package name: lutefisk Version : 1.0.5 Upstream Author : Richard S. Johnson jsric...@alum.mit.edu * URL : http://sourceforge.net/projects

Bug#527141: ITP: lutefisk -- Software for the de novo interpretation of peptide CID spectra

Hello, On Wed, May 06, 2009 at 08:39:20AM +0200, Andreas Tille wrote: On Tue, 5 May 2009, Filippo Rusconi wrote: [...] Lutefisk performs a de novo interpreation of CID spectra, providing the user with a file containing all the possible sequence candidates corresponding to the CID data fed

Bug#527141: ITP: lutefisk -- Software for the de novo interpretation of peptide CID spectra

On Wed, May 06, 2009 at 11:17:53AM +0200, Andreas Tille wrote: On Wed, 6 May 2009, Filippo Rusconi wrote: So this program is definitely mass spectrometry-oriented. As other tools I am either developing myself (massXpert) or simply packaging (mMass), its aim is to help in the interpretation

Bug#528086: massxpert_2.0.0-1(mips/unstable): FTBFS: missing build dependency

/indep packages using well crafted debian/rules targets do not make these efforts for no reason. Cheers, Filippo [0] http://buildd.debian.org/build.php?arch=mipspkg=massxpertver=2.0.0-1 -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert'' at http://www.massxpert.org

Bug#521918: pbuilder --build --binary-arch invokes 'build' target

/bugreport.cgi?bug=528086 -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert'' at http://www.massxpert.org signature.asc Description: Digital signature

Bug#521918: pbuilder --build --binary-arch invokes 'build' target

On Mon, May 11, 2009 at 03:52:07PM +0200, Giacomo A. Catenazzi wrote: Filippo Rusconi wrote: On Mon, May 11, 2009 at 02:11:18PM +0200, Julien Cristau wrote: On Mon, May 11, 2009 at 13:46:30 +0200, Lionel Elie Mamane wrote: No, policy is very clear on that: if you call the build target, you

Bug#521918: pbuilder --build --binary-arch invokes 'build' target

On Mon, May 11, 2009 at 08:34:54PM +0200, Petr Pudlak wrote: On Mon, May 11, 2009 at 03:11:22PM +0200, Filippo Rusconi wrote: It is a pity to have a Debian Policy so well documented, to point package-making learners to that Policy and then have non-conformant builders. In fact

Bug#522443: debian-maintainers: jetring changeset patch for Filippo Rusconi

Package: debian-maintainers Version: 1.52 Severity: normal Tags: patch -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Greetings, please add me to the Debian Maintainers keyring. Jetring changeset is attached. Thank you, Filippo Rusconi - -- System Information: Debian Release: 5.0 APT

Bug#289532: Any news for #289532?

back. I did not check the behaviour of the program since a long time and I now use the USB card reader device like a mass storage device with no problem whatsoever. What should we do with the bug, then ? Regards, Filippo -- Filippo Rusconi, PhD - CNRS - public key C78F687C @ pgp.mit.edu Author

Bug#544072: cowbuilder --create fails with 'E: Internal error: install' and 'E: cdebootstrap failed'

: Failure while configuring base packages. W: Failure while configuring base packages. E: debootstrap failed W: Aborting with an error pbuilder create failed forking: rm -rf /var/cache/pbuilder/base-test.cow Filippo Rusconi -- System Information: Debian Release: squeeze/sid APT prefers

Bug#544072: cowbuilder --create fails with 'E: Internal error: install' and 'E: cdebootstrap failed'

package. From that on, I was occupied by other real life stuff... Hope this helps understand the situation ; thanks for a wonderful package, Ciao Filippo At Fri, 28 Aug 2009 16:46:09 +0200, Filippo Rusconi wrote: Package: cowbuilder Version: 0.57 Severity: grave Justification

Bug#544980: korganizer: KOrganizer : failure at cloning fully one event from a date to another

. Because I find successfully making events (however these a created) is one central task one performs with a calendar, I have set the Severity to important, however, I still can create an new event ex nihilo, without resorting to drag and drop. Thank you for listening, Filippo Rusconi -- System

Bug#553622: ITP: colorcode -- advanced clone of the MasterMind game

Package: wnpp Severity: wishlist Owner: Filippo Rusconi rusconi-deb...@laposte.net * Package name: colorcode Version : 0.5.5 Upstream Author : Dirk Laebisch d...@laebisch.de * URL : http://colorcode.laebisch.com/ * License : GPL-3 Programming Lang: C

Bug#554011: maildir-utils: fix typos in the man page

Package: maildir-utils Version: 0.4-2 Severity: minor Tags: patch Some typos in the man page mu-find.1. Patch attached. Thank you Filippo -- System Information: Debian Release: squeeze/sid APT prefers testing APT policy: (500, 'testing') Architecture: i386 (i686) Kernel: Linux

Bug#554219: mailfilter: Undocumented behaviour with respect to config files

Package: mailfilter Version: 0.8.1-2 Severity: normal Greetings, I found that mailfilter does not like files ending not with a blank line. While this might be understandable (this is often the case with parsed files), I think it might be useful to state that in the manual page (mailfilterex.5,

Bug#622972: ITP: qonjugator -- Qonjugator conjugates verbs in different languages

Package: wnpp Severity: wishlist Owner: Filippo Rusconi rusconi-deb...@laposte.net * Package name: qonjugator Version : 0.17 Upstream Author : Glad Deschrijver glad.deschrij...@gmail.com * URL : http://qt-apps.org/content/show.php/Qonjugator?content=112575 * License

Bug#614373: wget: diff for NMU version 1.12-2.2

tags 614373 + patch tags 614373 + pending thanks Dear maintainer, I've prepared an NMU for wget (versioned as 1.12-2.2) and uploaded it to DELAYED/7. Please feel free to tell me if I should delay it longer. Best regards. Filippo Rusconi -- Filippo Rusconi, PhD - CNRS - public key C78F687C

Bug#614373: wget: mixes dpatch and 3.0 (quilt) | wget: diff for NMU version 1.12-2.2

to agree, I am eager to prepare a new patch in order to fix the mishap in one go. I would not be able to upload the package but could provide you with the files in some way. Best regards, Filippo -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert'' at http

Bug#624371: ITP: ADIOS -- ADIOS Adaptable IO subsystem for science

. That is, by providing *what* ? Best regards, Filippo -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert'' at http://www.massxpert.org signature.asc Description: Digital signature

Bug#632934: texlive-latex-extra: The achemso class (American Chemical Society) is outdated.

Package: texlive-latex-extra Version: 2009-10 Severity: wishlist Greetings, the achemso package (upstream http://pubs.acs.org/paragonplus/submission/general/achemso.tds.zip) is outdated. Present version in testing : [2009/09/01 v3.3a Submission to ACS journals] Present version at ACS :

Bug#645318: Text does not scroll correctly in the feed reader

Package: akregator Version: 4:4.4.11.1+l10n-1 Severity: important Greetings, the text that is displayed for any given feed sometimes fails to scroll correctly. Oddly, indeed, when scrolling with mouse wheel, with PgUp/PgDown or with the scrollbar, only two or three lines at the top of the reader

Bug#645338: Print rendering output is different from input

2.7.2-8 pn python-lxml 2.3-0.1+b2 pn python-numpy 1:1.5.1-2+b1 pn python-uniconvertor none pn ruby 4.8 pn ruby1.8 [ruby] 1.8.7.352-2 pn skencil none -- no debconf information -- -- Filippo Rusconi

Bug#645318: Text does not scroll correctly in the feed reader

not observed that failure anymore since a while... You can close the bug. Thank you. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org

Bug#690177: ITP: python-mzml -- mzML mass spectrometric data parsing

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: python-mzml Version : 0.7.4 Upstream Author : Christian Fufezan christ...@fufezan.net * URL : http://pymzml.github.com/ * License : LGPL Programming Lang: Python

Bug#691129: ITP: openms -- package for LC/MS data management and analysis

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: openms Version : 1.9.0 Upstream Author : Oliver Kohlbacher oliver.kohlbac...@uni-tuebingen.de * URL : http://open-ms.sourceforge.net * License : (Artistic) Programming

Bug#693044: ITP: proteowizard -- library to perform proteomics data analyses

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: proteowizard Version : 3.0.4098 Upstream Author : Spielberg Family Center for Applied Proteomics * URL : http://proteowizard.sourceforge.net/ * License : Apache License

Bug#693532: missing dependency

Package: notmuch Version: 0.13.2-1 Severity: important Greetings, notmuch should depend on libmail-box-perl, which is not installed along with notmuch. When apt-get installing that package, the software works as expected. Thanks -- System Information: Debian Release: wheezy/sid APT prefers

Bug#693978: seemingly erroneous --color and --notify options in git-buildpackage manpage

Package: git-buildpackage Version: 0.6.0~git20120601 Severity: minor Tags: patch Greetings, git-buildpackage (testing) fails when called with '--notify=on' or '--color=on', while it does not fail when called with '--git-notify=on' or '--git-color=on'. '--color' and '--notify' are erroneously

Bug#693998: ITP: linux-minidisc -- Free software for accessing NetMD and HiMD MiniDisc devices

of possible trademark violations. If you have a better idea, I'd be happy to hear it ;). minidisk-intercessor minidisk-accessor ??? Ciao Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert

Bug#718515: deleting a distance object makes the program segfault (example file provided)

Package: freecad Version: 0.13~20121120.git5082ae2-2~exp2 Severity: important Greetings, This is a reproducible problem and a recurrent one: I create lots of distance object using the measure tool. I do not want, however, to have them stored in the file, and I thus erase them right after the

Bug#718569: mouse-selectability of objects is lost right after saving a project

Package: freecad Version: 0.13~20121120.git5082ae2-2~exp2 Severity: normal Tags: upstream Greetings, I have to admit I do not know if this is a bug or a feature but I systematically loose selectability of any item in my project upon saving a file. The only way I found to be able to select items

Bug#695553: [Debichem-devel] Bug#695553: tandem-mass: FTBFS: cannot stat `debian/tmp/bin/tandem': No such file or directory

debichem-de...@lists.alioth.debian.org Uploaders: Filippo Rusconi lopi...@debian.org Standards-Version: 3.9.3 Build-Depends: debhelper (= 7.0.50~), diff -Nru tandem-mass-20121001/debian/tandem-mass.install tandem-mass-20121001/debian/tandem-mass.install --- tandem-mass-20121001/debian/tandem

Bug#702466: 702...@bugs.debian.org: no follow-up...

be interesting to have that fix in the next stable. Any directions ? Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email

Bug#702573: libopenms1 - No stable ABI

-- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact

Bug#702466: tag biology::nuceleic-acids is erroneous and affects a number of packages

Package: debtags Version: 1.10.1 Severity: minor Tags: patch Greetings, I found that the biology tag has a subtag nuceleic-acids that should be spelled nucleic-acids. I am providing a patch according to the debtags man page example Produce a local tag patch and another patch created after

Bug#702606: [Debichem-devel] Bug#702606: openms: FTBFS due to truncated object files

and I have already added a .NOTPARALLEL statement in debian/rules. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email

Bug#667129: cb2bib: ftbfs with GCC-4.7

indeed, and to Matthias Klose d...@debian.org and Cyril Brulebois k...@debian.org for handling that bug (with a patch) that somehow escaped my radar. I am handling that bug right away. All the best, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS

Bug#720995: Please, package new version of the seqan software project

Package: seqan-dev Version: 1.4.1 Severity: wishlist Greetings, Fellow Debianists, only a friendly ping to remind you that a new 1.4.1 version of the Seqan software project is available since 11. July 2013. I would be glad to be able to use that new version to package the openMS software suite.

Bug#720995: Please, package new version of the seqan software project

keep you posted. Ciao Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org

Bug#722606: printing fails with Perl error

Package: muttprint Version: 0.73-4 Severity: important Greetings, this is an error that did not occur until very recently. When trying to print a message from the mutt MUA, the following message is shown in the console: This shouldn't happen at /usr/share/perl/5.18/Text/Wrap.pm line 84, STDIN

Bug#737533: ITP: r-cran-rnetcdf -- GNU R package that provides an R Interface to NetCDF Datasets

please enhance the long description since not every reader knows about netcdf and it just helps people who don't if they realise tht this package is not for them without doing additional research. We'll do that. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu

Bug#731064: [Debichem-devel] Bug#731064: libpwiz: FTBFS on ia64 mips mipsel s390x

/boost_aux/boost/atomic + cd $(BUILD_DIR) autotools/configure --prefix=/usr \ VERBOSE=1 $(MAKE) \ VERBOSE=1 DESTDIR=$(INSTALL_DIR) $(MAKE) install -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org

Bug#736536: ITP: libwildmagic -- libraries for mathematics, physics, numerical methods

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: libwildmagic Version : 5.11 Upstream Author : Dave Eberly debe...@geometrictools.com * URL : http://geometrictools.com/ * License : Boostv1.0 Programming Lang: C

Bug#736760: Conflict between debian/upstream (DEP-12) debian/upstream/ (uscan)

of reverting the change in devscripts. +1 Happy hacking, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#738137: [Debichem-devel] Bug#738137: libpwiz: FTBFS on mips*: virtual memory exhausted

think that this might work? I mean, are the mips systems characterized by this string: mips-linux-gnu Same for mipsel-linux-gnu? Thank you for your help, Ciao Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org

Bug#738137: libpwiz: FTBFS on mips*: virtual memory exhausted

. Sincerely, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject

Bug#740309: [Debichem-devel] Bug#740309: libpwiz FTBFS: configure: error: cannot compile a test that uses Boost thread

error exit status 2 E: Failed autobuilding of package Thanks for the report. Same problem here, I'm investigating this one. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert

Bug#758116: Please be verbose whether you would like to get your Blend promoted by tasksel

think that Debian still has the reputation of being difficult to deal with at install time. Thanks, Andreas to bring this forward for us not at the DebConf or not immediately involved with the installer-related topics. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key 7694CF42

Bug#633876: closed by Filippo Rusconi lopi...@debian.org (Bug#633876: fixed in cb2bib 1.4.9-2)

Cheers, --Barak. Thanks for this mail, I could get the git repos' debian branch. I implemented the new version of d/rules and I uploaded a new version as I think it is indeed much cleaner. Thank you, Cheers, Filippo -- Filippo Rusconi

Bug#758949: mmass: Patch for wxWidgets3.0 compatibility

stand and be seated straight as a `i', so I can test the patch. If it works fine, I'll upload soon. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key 7694CF42@ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org

Bug#764519: ITP: hekate

Package: wnpp Owner: Filippo Rusconi lopi...@debian.org Severity: wishlist * Package name: hekate Version : 2014108~git Upstream Author : Andrew Holding andrew.hold...@cruk.cam.ac.uk * URL or Web page : https://github.com/MRC-LMB-MassSpec/Hekate * License : GPL-3

Bug#763747: ITP: libmstoolkit

Package: wnpp Owner: Filippo Rusconi lopi...@debian.org Severity: wishlist * Package name: libmstoolkit Version : 72.0.0-1 Upstream Author : michael.hoopm...@gmail.com * URL or Web page : https://code.google.com/p/mstoolkit/ * License : BSD-3-Clause Description

Bug#768058: ITP: comet-ms -- Tandem mass spectrometry (MS/MS) search engine

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: comet-ms Version : 2014022 Upstream Author : Michael R. Hoopmann and colleagues * URL : http://sourceforge.net/projects/comet-ms/ * License : Apache Programming Lang: C

Bug#797999: Tested with unstable today : no change only a black screen => qt 5.5.1 does not fix the dual screen problem (on nvidia at least)

at 01:57:15PM +0100, Eric Valette wrote: A someone suggested that qt 5.5+ may solve the problem, I did a quick test today (5.5.1-6) -- eric -- -- Filippo Rusconi, PhD - public crypto key 7694CF42@ pgp.mit.edu Researcher at CNRS and Debian Developer

Bug#802517: Crashes each time a union boolean operation is tried

Package: freecad Version: 0.15.4671+dfsg1-1 Severity: important Greetings, whenever I try a union boolean operation, the program crashes with the following error: *** Abort *** an exception was raised, but no catch was found. ... The exception is:SIGSEGV 'segmentation violation'

Bug#804496: openms: GSL transition requires rebuild

he new dependency and that fails with an error due to an abi change. I have sent that error message to upstream. I am waiting for their response. Regards, Filippo -- Filippo Rusconi, PhD - public crypto key 7694CF42@ pgp.mit.edu Researcher at CNRS and Debian Developer <lopi...@debian.or

Bug#832137: When selection option index 0 (Burn ISO) from the ISO Menu, nothing happens. The other menus seem to work.

Package: bashburn Version: 3.0.1-2 Severity: important Greetings, The subject actually says it all. This bug makes bashburn unsuitable to burn ISO images. Sincerely Filippo -- System Information: Debian Release: stretch/sid APT prefers testing APT policy: (500,

Bug#864513: lutefisk FTCBFS: uses the build architecture compiler

ln -s $(BUILDDIR)/Makefile.linux $(BUILDDIR)/Makefile override_dh_auto_build: - - $(MAKE) all -C $(BUILDDIR) + dh_auto_build --builddirectory=$(BUILDDIR) -- all override_dh_clean: dh_clean -- -- Filippo Rusconi, PhD - public crypto key B053 304E 17D6 D419 DD9B 4651 41A

Bug#883538: ITP: libmsnumpress -- numerical compression in mass spectrometry data

Package: wnpp Severity: wishlist Owner: Filippo Rusconi <lopi...@debian.org> * Package name: libmsnumpress Version : 1.0.0 Upstream Author : Johan Teleman et al <johan.tele...@immun.lth.se> * URL : https://github.com/ms-numpress/ms-numpress

Bug#901535: cb2bib FTCBFS: does not pass cross flags to qmake

dh_auto_configure do it. That makes cb2bib cross buildable. Please consider applying the attached patch. Thanks for the patch. Could you please enlighten me on the presence of the lonely +override_dh_auto_install: patch line, please? Thank you, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD

Bug#889701: comet-ms: unsatisfiable build dependency

rop these packages altogether, which is a real pity because they are good stuff. Cheers, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://msxpertsuite.org ⠈⠳⣄ http://www.debian.org

Bug#889701: comet-ms: unsatisfiable build dependency

As a follow-up, I just got a mail from upstream as a response to my enquiry of today. Upstream is OK to fix the autorship/license problems soon, to I'm optimistic about the resolution of this bug. Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http

Bug#907388: test

Package: msxpertsuite Version: 5.3.3-1 Severity: wishlist -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 test - -- System Information: Debian Release: buster/sid APT prefers testing APT policy: (500, 'testing'), (500, 'stable'), (1, 'experimental') Architecture: amd64 (x86_64) Kernel: Linux

Bug#907388: test

done the test. thanks for your patience. On Mon, Aug 27, 2018 at 02:14:36PM +0200, Filippo Rusconi wrote: Package: msxpertsuite Version: 5.3.3-1 Severity: wishlist -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 test - -- System Information: Debian Release: buster/sid APT prefers testing APT

Bug#896141: msxpertsuite: binary-all FTBFS

ild/massxpert/user-manual' And the build finishes successfully the package creation step. Cheers, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#896141: msxpertsuite: binary-all FTBFS

On Fri, Apr 20, 2018 at 12:01:43PM +0300, Adrian Bunk wrote: On Fri, Apr 20, 2018 at 10:21:36AM +0200, Filippo Rusconi wrote: ... Can you provide more insight into this copy error? As I tell you, that error does not happen on my unstable chroot, running dpkg-buildpackage -A exactly the same

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