Re: [RFS] q2-types 2020.11.0-1

Hi Étienne, On 01.12.20 23:52, Étienne Mollier wrote: > Good day, > > I pushed q2-types 2020.11.0-1. Past this one which seems rather > fundamental, I think other q2-* modules will be easily worked on > in parallel: > > https://salsa.debian.org/med-team/q2-types > > Please consider review

Re: [RFS] q2-types 2020.11.0-1

Étienne Mollier, on 2020-12-01 23:52:36 +0100: > https://salsa.debian.org/med-team/q2-types Oh, I wanted to mention there is a kind of pattern. q2 modules need to be registered against Qiime to be able to run the test suite. However registration is not done at build time testing, and thus

[RFS] q2-types 2020.11.0-1

Good day, I pushed q2-types 2020.11.0-1. Past this one which seems rather fundamental, I think other q2-* modules will be easily worked on in parallel: https://salsa.debian.org/med-team/q2-types Please consider review and upload (and eventually DM permissions if it seems appropriate.)

Re: dh_testroot: error: Package needs targeted root but builder has not provided a gain-root command via ${DEB_GAIN_ROOT_CMD}

On Tue, Dec 01, 2020 at 09:08:23PM +0100, Andreas Tille wrote: > Control: tags -1 pending > > Hi, > > upstream of fis-gtm package[1] confirmed that the build needs some root > permissions. Thus I've set > >Rules-Requires-Root: yes There is no "Rules-Requires-Root: yes", see the Policy. --

Re: dh_testroot: error: Package needs targeted root but builder has not provided a gain-root command via ${DEB_GAIN_ROOT_CMD}

Andreas Tille: > Control: tags -1 pending > > Hi, > > upstream of fis-gtm package[1] confirmed that the build needs some root > permissions. Thus I've set > >Rules-Requires-Root: yes > > When trying to build with pbuilder I get: > >dh_testroot > dh_testroot: error: Package needs

dh_testroot: error: Package needs targeted root but builder has not provided a gain-root command via ${DEB_GAIN_ROOT_CMD}

Control: tags -1 pending Hi, upstream of fis-gtm package[1] confirmed that the build needs some root permissions. Thus I've set Rules-Requires-Root: yes When trying to build with pbuilder I get: dh_testroot dh_testroot: error: Package needs targeted root but builder has not provided a

Re: [qiime2/qiime2] InternalDirectory's rename() will fail on python 3.8 (#520)

Hi, if you ask me we should stop discussing with non-corporate upstream. If your patch works for us (at least for 64bit) we should go on and upload with the patch. Kind regards Andreas. - Forwarded message from Matthew Dillon - Date: Tue, 01 Dec 2020 08:15:38 -0800 From:

Re: qiime2 status update

Hi Steffen, Steffen Möller, on 2020-12-01 19:42:23 +0100: > Does this mean that the many q2-xyz packages we can now also think about > updating? Sounds like it! :) Cheers, -- Étienne Mollier Fingerprint: 8f91 b227 c7d6 f2b1 948c 8236 793c f67e 8f0d 11da Sent from /dev/pts/1, please excuse

Re: qiime2 status update

Well done, Étienne! Does this mean that the many q2-xyz packages we can now also think about updating? Best, Steffen On 01.12.20 19:14, Étienne Mollier wrote: > Hi Andreas, > > Andreas Tille, on 2020-12-01 09:46:28 +0100: >> On Tue, Dec 01, 2020 at 12:06:45AM +0100, Étienne Mollier wrote: >>>

Re: qiime2 status update

Hi Andreas, Andreas Tille, on 2020-12-01 09:46:28 +0100: > On Tue, Dec 01, 2020 at 12:06:45AM +0100, Étienne Mollier wrote: > > Changes are not marked ready for > > upload yet, as there might still be some blocking points > > reported by the package tracker[1], notably 32-bits support. > > I'd

Videoconference tomorrow, Wednesday 2020-12-02 18:00 UTC (Was: For those who want to keep on contributing (Was: Debian @ COVID-19 Biohackathon (April 5-11, 2020))

Hi, several European countries are back to lockdown again. May be this might give some more people a motivation to join our effort. The video conferences of the Debian Med team are an established means to continue the COVID-19 hackathon in April[1] and we do it twice per month on every 2th

[RFS] pplacer

gbp clone --pristine-tar https://salsa.debian.org/med-team/pplacer OR dcut dm --uid npatra...@gmail.com --allow pplacer Thanks and Regards Nilesh

Fwd: Re: [qiime2/qiime2] InternalDirectory's rename() will fail on python 3.8 (#520)

Hi, I've received this email from GitHub about QIIME development that may be of interest to us packaging QIIME for Debian-Med. Please join the conversation on GitHub if you're interested. Thanks, Tony. -- Minke Informatics Limited, Registered in Scotland - Company No. SC419028 Registered

Re: Is there any blockers for shasta upload?

Hi Nilesh, On Tue, Dec 01, 2020 at 04:32:48AM +0530, Nilesh Patra wrote: > Shasta currently has a few RC(severity: serious) and > Non-RC(Severity:important) bugs filed. I do see a fix in salsa. Is there > any blockers for its upload? Thanks for the ping. I get Not building database;

Re: qiime2 status update

Hi Étienne, On Tue, Dec 01, 2020 at 12:06:45AM +0100, Étienne Mollier wrote: > Hi there, > > Sorry it took quite a long time, I kind of struggled a bit with > the test suite of qiime. In the end I had to disable the build > time test, since apparently, pkg_resources is rather picky about > the