Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-08-26 Thread Pranav Ballaney
Hi Andreas, Here are my contributions during Debian Med Sprints: Sprint 1 (April 5 - 11) New packages: * trinculo * r-bioc-htsfilter Sprint 2 (June 15-21) Added autopkgtests: * ivar * drop-seq * flash * pilon * ngmlr * wham-align Sprint 3 (August 16-22) Added autopkgtests: * bio-rainbow *

Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-08-26 Thread Nilesh Patra
Hi Andreas, > Feel free to add your contribution here to this thread on the mailing > list - I see no reason to hide it in some private mail (which is fine anyway if you prefer this). Thanks a lot for these efforts, and congratulations on getting your talk selected! These are my contributions

Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-08-02 Thread Sao I Kuan
On Tue, Jul 28, 2020 at 3:43 PM Andreas Tille wrote: > Feel free to add your contribution here to this thread on the mailing > list - I see no reason to hide it in some private mail (which is fine > anyway if you prefer this). Hi Andreas, Here is my contributions for COVID-19 related topics:

Re: Status of paleomix (Was: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk)

2020-07-30 Thread Antoni Villalonga
On Thu, Jul 30, 2020 at 10:07:37AM +0200, Andreas Tille wrote: > On Wed, Jul 29, 2020 at 11:10:40PM +0200, Steffen Möller wrote: > >  - the python3-setuptools I would have left at the top since this is > > something "meta" that does not describe what the package is > > implementing, but ... hey

Re: Status of paleomix (Was: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk)

2020-07-30 Thread Steffen Möller
Hi Andreas and Antoni, On 30.07.20 10:07, Andreas Tille wrote: > Hi Steffen and Antoni, > > On Wed, Jul 29, 2020 at 11:10:40PM +0200, Steffen Möller wrote: >> Hi Antoni, >> >> had a look at [0] and liked it. @Andreas [who has worked on the package >> prior to your commits], ping me if you want me

Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-07-30 Thread Pierre Gruet
Hi Andreas, Congratulations for getting this opportunity to talk about our work! Personally, I have worked on * Sumaclust (and its close relatives Sumatra and Sumalibs); * Dependencies of Snpeff, which is part of the Covid-19 task. Bye, Pierre Le 28/07/2020 à 08:43, Andreas Tille a écrit : >

Status of paleomix (Was: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk)

2020-07-30 Thread Andreas Tille
Hi Steffen and Antoni, On Wed, Jul 29, 2020 at 11:10:40PM +0200, Steffen Möller wrote: > Hi Antoni, > > had a look at [0] and liked it. @Andreas [who has worked on the package > prior to your commits], ping me if you want me to proceed. I pinged again

Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-07-29 Thread Steffen Möller
Hi, Have many thanks for this presentation. I think this is important for us, and I think your presentation could mention why these Covid-19-biohackathons of Debian are beneficial for Covid-19 research:  * for many contributors this may be the first contact with scientific software and for all

Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-07-29 Thread Steffen Möller
Hi Antoni, had a look at [0] and liked it. @Andreas [who has worked on the package prior to your commits], ping me if you want me to proceed. What I am tempted to comment on:  - the python3-setuptools I would have left at the top since this is something "meta" that does not describe what the

Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-07-29 Thread Antoni Villalonga
On Tue, Jul 28, 2020 at 08:43:25AM +0200, Andreas Tille wrote: > Hi, > > my talk proposal for DebConf20[1] was accepted recently. I would like > to thank all contributers (who "stayed home and contributed" ;-) ) in > this talk. To make sure I will not miss anybody please be so kind and > send

Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-07-29 Thread Étienne Mollier
Hi Andreas, Andreas Tille, on 2020-07-28 08:43:25 +0200: > Feel free to add your contribution here to this thread on the mailing > list - I see no reason to hide it in some private mail (which is fine > anyway if you prefer this). On the packaging side, I can mention prinseq-lite and its

Re: Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-07-28 Thread merkys
Hi Andreas, On 2020-07-28 09:43, Andreas Tille wrote: > my talk proposal for DebConf20[1] was accepted recently. I would like > to thank all contributers (who "stayed home and contributed" ;-) ) in > this talk. Congrats! And thank you for your tremendous efforts to coordinate the hackathon! :)

Please list your contributions to COVID-19 sprint as intput for my DebConf20 talk

2020-07-28 Thread Andreas Tille
Hi, my talk proposal for DebConf20[1] was accepted recently. I would like to thank all contributers (who "stayed home and contributed" ;-) ) in this talk. To make sure I will not miss anybody please be so kind and send me an e-mail with a list of your contributions - I'm afraid I would forget