Re: cluster3 dropped out of testing

2020-12-08 Thread tony mancill
Hi Diane, On Tue, Dec 08, 2020 at 10:14:24AM -0800, Diane Trout wrote: > My coworker noticed cluster3 dropped out of testing and I'm confused > why. > > https://tracker.debian.org/pkg/cluster3 > says that "cluster3 has no binaries on any arch", and there are no logs > at buildd

Re: routine-update builds twice, but does not clean after the first

2020-12-08 Thread Andreas Tille
On Mon, Dec 07, 2020 at 11:25:16PM +0100, Steffen Möller wrote: > > routine-update now checks if the repository is clean prior to invoking > 'gbp tag', > and runs ./debian/rules clean if not. Sounds sensible. When building in a chroot per definition the current Git repository should be

Re: [RFS] libpdb-redo

2020-12-08 Thread Andreas Tille
Hi Maarten, thanks again for your contribution. I'm afraid there is another cut-n-pasto in d/copyright: Upstream-Name: libcifpp Source: http://github.com/PDB-REDO/libcifpp Otherswise it seems to be fine for sponsoring. Kind regards Andreas. On Tue, Dec 08, 2020 at 11:40:16AM

Re: [RFS] Libnewuoa

2020-12-08 Thread Maarten L. Hekkelman
Hi Andrius, Op 07-12-2020 om 16:59 schreef Andrius Merkys: OK, shoot me... upstream provided the new tag. J Version is now 0.1.1 Awesome! Uploaded. Thanks, and it was accepted within just a few hours as well, wow. But..., I made an error, forgot to add build-essential to the Depends for

some bioconductor packages up for peer review

2020-12-08 Thread Steffen Möller
Hello, a series of packages on https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit#gid=1251251902 somehow does not seem to have gone anywhere. I just added r-bioc-gseabase and r-bioc-gsva to that list. Many thanks Steffen

[RFS] libpdb-redo

2020-12-08 Thread Maarten L. Hekkelman
Finally I'm reaching the more interesting software I'd like to contribute. This library contains a lot of code that is shared among the various programs created for PDB-REDO ( https://pdb-redo.eu ) The library contains code to create map files from MTZ and structure files. Distance maps, bond

cluster3 dropped out of testing

2020-12-08 Thread Diane Trout
Hi, My coworker noticed cluster3 dropped out of testing and I'm confused why. https://tracker.debian.org/pkg/cluster3 says that "cluster3 has no binaries on any arch", and there are no logs at buildd https://buildd.debian.org/status/package.php?p=cluster3 for it However if I grab either the

Re: [RFS] libpdb-redo

2020-12-08 Thread Maarten L. Hekkelman
Hi Andreas, Op 08-12-2020 om 12:04 schreef Andreas Tille: thanks again for your contribution. I'm afraid there is another cut-n-pasto in d/copyright: Upstream-Name: libcifpp Source: http://github.com/PDB-REDO/libcifpp Otherswise it seems to be fine for sponsoring. I wonder if I

Re: [RFS] Libnewuoa

2020-12-08 Thread Andrius Merkys
Hi Maarten, On 2020-12-08 09:22, Maarten L. Hekkelman wrote: > Thanks, and it was accepted within just a few hours as well, wow. > > But..., I made an error, forgot to add build-essential to the Depends > for autopkgtest. > > Fixed that, could you please upload again? Uploaded. Thanks!

[RFS] kleborate

2020-12-08 Thread Nilesh Patra
gbp clone --pristine-tar https://salsa.debian.org/med-team/kleborate OR dcut dm --uid npatra...@gmail.com --allow kleborate Thanks and Regards Nilesh

q2-dada2 added Re: some bioconductor packages up for peer review

2020-12-08 Thread Steffen Möller
On 08.12.20 14:47, Steffen Möller wrote: > Hello, > > a series of packages on > > https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit#gid=1251251902 > > somehow does not seem to have gone anywhere. I just added > r-bioc-gseabase and r-bioc-gsva to that list.

kmc update and options to move forward

2020-12-08 Thread Étienne Mollier
Greetings, I recently uploaded kmc 2.3+dfsg-10 to address #954270. I'm not very satisfied with my patch however, as it is a mere cap of the default threading value, while waiting for a cleaner fix, which exists and it is kind of frustrating. :( During my investigations to solve this bug, I

done Re: [RFS] kleborate

2020-12-08 Thread Steffen Möller
Thanks! On 08.12.20 20:59, Nilesh Patra wrote: > > dcut dm --uid npatra...@gmail.com --allow > kleborate