Steffen Möller wrote:
> htscodecs is now distributed next to samtools
[...]
>
> I needed this update to compile 1.12 of htslib. which again is required
> to compile bcftools 1.12.
If you are making htslib depend on your libhtscodecs package then you need to
configure htslib to use it via
Hi John,
Am 25.05.21 um 15:17 schrieb John Marshall:
> Steffen Möller wrote:
>> htscodecs is now distributed next to samtools
> [...]
>> I needed this update to compile 1.12 of htslib. which again is required
>> to compile bcftools 1.12.
> If you are making htslib depend on your libhtscodecs
Dear Pjotr,
Am 25.05.21 um 19:18 schrieb Pjotr Prins:
> I am looking at
>
> https://packages.debian.org/sid/amd64/libvcflib-tools/filelist
>
> and the R scripts are there. I think it is strange that many tools get
> installed in /usr/lib/vcflib/bin/ though. Is this policy? The man
> pages cover
Dear Steffen,
I am looking at
https://packages.debian.org/sid/amd64/libvcflib-tools/filelist
and the R scripts are there. I think it is strange that many tools get
installed in /usr/lib/vcflib/bin/ though. Is this policy? The man
pages cover them all.
wdyt?
Pj.
On Sun, May 23, 2021 at
Isn't namespace pollution something that comes up when you have a
conflict? What is the chance of vcfallelicprimitives getting into a
conflict? It would have to be another VCF toolkit ;)
On Tue, May 25, 2021 at 07:41:46PM +0200, Steffen Möller wrote:
> Dear Pjotr,
>
> Am 25.05.21 um 19:18
Hi Andreas,
On 5/24/21 2:34 AM, Andreas Tille wrote:
> Hi Nilesh,
>
> On Sun, May 23, 2021 at 03:07:09PM +0530, Nilesh Patra wrote:
>>> now and I've also uploaded to new. I admit I forgot for what
>>> final target I was working on this lib. :-(
>>
>> This was the final target:
Am 25.05.21 um 15:17 schrieb John Marshall:
> Steffen Möller wrote:
>> htscodecs is now distributed next to samtools
> [...]
>> I needed this update to compile 1.12 of htslib. which again is required
>> to compile bcftools 1.12.
> If you are making htslib depend on your libhtscodecs package then
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