Re: Please update sight packaging

2021-10-20 Thread Flavien Bridault
Dear Andreas, I disabled the samples for now, I think that's the simplest and that even speeds up the build a bit. :) This builds fine on my side, with pbuilder. Cheers, *Dr. Flavien BRIDAULT* Director of Software Development IRCAD France & IRCAD Africa flavien.brida...@ircad.fr

Bug#996921: RFA: unifrac

2021-10-20 Thread Nilesh Patra
Package: wnpp Severity: normal X-Debbugs-Cc: debian-med@lists.debian.org Hi, I currently have no interest in maintaining unifrac, which is a bit cumbersome to maintain (the new update being an example) and it doesn't motivate me enough to keep maintaining it. Should you feel motivated, feel

Re: snakemake-dependency Fwd: Bug#996868: ITP: python-connection-pool -- thread-safe connection pool for python

2021-10-20 Thread Steffen Möller
On 20.10.21 14:08, Nilesh Patra wrote: On 20 October 2021 6:26:29 am IST, "Steffen Möller" wrote: Snakemake is working for me with python3-connection-pool installed, so I have uploaded. Best, Steffen I had uploaded with my hack, and autopkgtests work in salsa CI. I think we simply

Re: Please update sight packaging

2021-10-20 Thread Flavien Bridault
*Dr. Flavien BRIDAULT* Director of Software Development IRCAD France & IRCAD Africa flavien.brida...@ircad.fr Tél. : +33 (0)3 88 119 201 IRCAD France http://www.ircad.fr/ http://www.ircad.africa/ Suivez l'IRCAD

Re: Please update sight packaging

2021-10-20 Thread Andreas Tille
Hi Flavien, Am Wed, Oct 20, 2021 at 04:43:14PM +0200 schrieb Flavien Bridault: > I added some more dependencies and remove some you added. I understand you > added them to remove some CMake warnings, but normally we don't really care. > iirc this is just because of some CMake files in VTK that

Re: Please update sight packaging

2021-10-20 Thread Flavien Bridault
Hi Andreas, I think, I hope, that this time this is the right one! :) I added some more dependencies and remove some you added. I understand you added them to remove some CMake warnings, but normally we don't really care. iirc this is just because of some CMake files in VTK that are not as

cmake task for terraphast

2021-10-20 Thread Andreas Tille
Hi, we want to package raxml-ng which needs terraphast which I just injected[1]. The build process creates some files in obj-x86_64-linux-gnu but there seems to be no sensible install target. We probably need a library package and an application package. The application is currently named

Re: snakemake-dependency Fwd: Bug#996868: ITP: python-connection-pool -- thread-safe connection pool for python

2021-10-20 Thread Nilesh Patra
On 20 October 2021 6:26:29 am IST, "Steffen Möller" wrote: >Snakemake is working for me with python3-connection-pool installed, so I >have uploaded. > >Best, > >Steffen I had uploaded with my hack, and autopkgtests work in salsa CI. I think we simply revert the hack when we have connection

Re: Please update sight packaging

2021-10-20 Thread Andreas Tille
Hi Flavien, Am Wed, Oct 20, 2021 at 08:45:34AM +0200 schrieb Flavien Bridault: > Thank you for this precious advice. The tip to run pdebuild when calling gbp > buildpackage definitely helps. > > My next step was to try to build sight in pbuilder but I did not know how to > do so without camp

Re: Please update sight packaging

2021-10-20 Thread Flavien Bridault
Hello Andreas, Thank you for this precious advice. The tip to run pdebuild when calling gbp buildpackage definitely helps. My next step was to try to build sight in pbuilder but I did not know how to do so without camp being uploaded in unstable first... I just found some documentation now