Re: Bug#986141: ITP: snpeff -- genetic variant annotation and effect prediction toolbox

2021-03-30 Thread Steffen Möller
While we are at it: I had to package SnpEff separately from its companion SnpSift, as their source trees are now completely separated. Do you (or someone else) know if SnpSift would be important to package? Looking at the spreadsheet I am not sure it is worth

Re: Bug#986141: ITP: snpeff -- genetic variant annotation and effect prediction toolbox

2021-03-30 Thread Pierre Gruet
Hi Steffen, Le 30/03/2021 à 16:32, Steffen Möller a écrit : Am 30.03.21 um 15:25 schrieb Andreas Tille: Hi Pierre, On Tue, Mar 30, 2021 at 01:16:17PM +0200, Pierre Gruet wrote: Yes! It is almost ready and I'm happy about this :) That's understandable considering the lot of work. Thank

Re: Bug#986141: ITP: snpeff -- genetic variant annotation and effect prediction toolbox

2021-03-30 Thread Steffen Möller
Am 30.03.21 um 15:25 schrieb Andreas Tille: > Hi Pierre, > > On Tue, Mar 30, 2021 at 01:16:17PM +0200, Pierre Gruet wrote: >> Yes! It is almost ready and I'm happy about this :) > That's understandable considering the lot of work. Thank you for this. Well done, indeed. >> While we are at it: I

Re: Bug#986141: ITP: snpeff -- genetic variant annotation and effect prediction toolbox

2021-03-30 Thread Andreas Tille
Hi Pierre, On Tue, Mar 30, 2021 at 01:16:17PM +0200, Pierre Gruet wrote: > > Yes! It is almost ready and I'm happy about this :) That's understandable considering the lot of work. > While we are at it: I had to package SnpEff separately from its companion > SnpSift, as their source trees are

Re: Bug#986141: ITP: snpeff -- genetic variant annotation and effect prediction toolbox

2021-03-30 Thread Pierre Gruet
Hi Andreas, Le 30/03/2021 à 13:07, Andreas Tille a écrit : Hi Pierre, very nice. Seems you had some progress with this long term goal! Yes! It is almost ready and I'm happy about this :) While we are at it: I had to package SnpEff separately from its companion SnpSift, as their source

Re: Bug#986141: ITP: snpeff -- genetic variant annotation and effect prediction toolbox

2021-03-30 Thread Andreas Tille
Hi Pierre, very nice. Seems you had some progress with this long term goal! Thanks a lot Andreas. On Tue, Mar 30, 2021 at 12:24:18PM +0200, Pierre Gruet wrote: > Package: wnpp > Severity: wishlist > Owner: Debian-med team > X-Debbugs-Cc: debian-de...@lists.debian.org,

Bug#986141: ITP: snpeff -- genetic variant annotation and effect prediction toolbox

2021-03-30 Thread Pierre Gruet
Package: wnpp Severity: wishlist Owner: Debian-med team X-Debbugs-Cc: debian-de...@lists.debian.org, debian-med@lists.debian.org * Package name: snpeff Version : 4.3t Upstream Author : Pablo Cingolani * URL : https://pcingola.github.io/SnpEff/ * License :