Re: Nanoplot - ORCA -> kaleido

2021-05-24 Thread Steffen Möller
Hi Étienne, Am 24.05.21 um 19:39 schrieb Étienne Mollier: > Steffen Möller, on 2021-05-24: >> Nanoplot was blocked by the tricky-to-package orca extension of plotly. >> Orca seems to be substituted by kaleido, which is also tricky to package. >> >> The idea is to

Nanoplot - ORCA -> kaleido

2021-05-23 Thread Steffen Möller
Nanoplot was blocked by the tricky-to-package orca extension of plotly. Orca seems to be substitute by kaleido, which is also tricky to package. The idea is to use some magic of chromium that is made available via docker to craft an executable that can transform SVGs in web outputs.  I am tempted

Re: ORCA

2020-11-04 Thread Steffen Möller
er.com/article/10.1007/s41019-017-0050-4 The list of packages they provide for Bioinformatics has much improved since I last looked at it. I added the brew packages referenced by the ORCA dockerfiles in the "Others" tab. But that seems wrong. Instead these should become a column "brew

Re: ORCA

2020-11-03 Thread Tony Travis
packaging system (like Conda). Would you mind doing some comparison? Would anybody consider contacting ORCA developers and invite them to join our list? I'm wondering whether a docker container featuring Debian Med packages might have advantages or disadvantages and I'm keen on learning what those

Re: ORCA

2020-11-02 Thread Andreas Tille
u mind doing some comparison? Would anybody consider contacting ORCA developers and invite them to join our list? I'm wondering whether a docker container featuring Debian Med packages might have advantages or disadvantages and I'm keen on learning what those disadvantages might be. Kind r

Re: ORCA

2020-11-02 Thread Steffen Möller
I had a second look. Impressive. Seems like linuxbrew has evolved enormously. On 02.11.20 17:07, Steffen Möller wrote: > Hi Tony, > > On 01.11.20 22:25, Tony Travis wrote: >> Hi, >> >> Has anyone looked at ORCA? >> >>> https://academic.oup.com/bioinform

Re: ORCA

2020-11-02 Thread Steffen Möller
Hi Tony, On 01.11.20 22:25, Tony Travis wrote: > Hi, > > Has anyone looked at ORCA? > >> https://academic.oup.com/bioinformatics/article/35/21/4448/5475597 > > It has recently been promoted on Cyverse-UK: > >> https://cyverseuk.org/ > > Came to my attentio

ORCA

2020-11-01 Thread Tony Travis
Hi, Has anyone looked at ORCA? https://academic.oup.com/bioinformatics/article/35/21/4448/5475597 It has recently been promoted on Cyverse-UK: https://cyverseuk.org/ Came to my attention because of the reference to Bio-Linux, which I've used a lot on the University of Arizona iPlant