Graham Inggs pushed to branch master at Debian Med / python-iow
Commits:
7ed9d4df by Graham Inggs at 2023-12-10T13:05:53-01:00
Drop the runtime dependency on Cython
- - - - -
a12fccb9 by Graham Inggs at 2023-12-10T13:06:31-01:00
Prepare for team upload to unstable
- - - - -
3 changed files
Graham Inggs pushed new tag debian/1.0.6-3 at Debian Med / python-iow
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debian-med
Graham Inggs pushed new tag debian/0.5.8-4.1 at Debian Med / python-skbio
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Graham Inggs pushed new branch python3.12 at Debian Med / python-skbio
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debian-med
Graham Inggs pushed new tag debian/0.3.6+ds-3 at Debian Med / pyscanfcs
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debian
Graham Inggs pushed to branch master at Debian Med / pyscanfcs
Commits:
b383be06 by Graham Inggs at 2022-07-21T21:57:29+02:00
Build-Depends: python3-dev instead of python3-all-dev
- - - - -
3606887b by Graham Inggs at 2022-07-21T21:59:54+02:00
Bump Standards-Version to 4.6.1
Graham Inggs pushed new tag debian/2.1.10-4 at Debian Med / python-biom-format
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Graham Inggs pushed to branch master at Debian Med / python-biom-format
Commits:
6e3744b0 by Graham Inggs at 2022-04-11T21:46:32+02:00
Enable build on all architectures
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07a391ec by Graham Inggs at 2022-04-11T21:47:51+02:00
Prepare for upload to unstable
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2 changed files
Graham Inggs pushed new tag debian/2.1.10-3 at Debian Med / python-biom-format
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Graham Inggs pushed to branch master at Debian Med / python-biom-format
Commits:
12783594 by Graham Inggs at 2021-12-03T18:23:14+02:00
Prepare for upload to unstable
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1 changed file:
- debian/changelog
Changes:
=
debian/changelog
Graham Inggs pushed new tag debian/0.5.6-6 at Debian Med / python-skbio
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debian
Graham Inggs pushed to branch master at Debian Med / uc-echo
Commits:
508261d3 by Graham Inggs at 2021-11-07T13:19:46+02:00
Do not build 32-bit binaries for the wrong architecture
- - - - -
83acbd12 by Graham Inggs at 2021-11-07T13:19:51+02:00
Build-Depend on python3 instead of python3-all
Graham Inggs pushed new tag debian/1.12-16 at Debian Med / uc-echo
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debian-med-commit
Graham Inggs pushed new tag debian/1.0.20190902+dfsg-2 at Debian Med / mricron
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Graham Inggs pushed to branch master at Debian Med / mricron
Commits:
32d65a3b by Graham Inggs at 2021-02-11T20:36:45+02:00
Prepare for upload to unstable
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3 changed files:
- debian/changelog
- + debian/patches/64bit.patch
- debian/patches/series
Changes
Graham Inggs pushed new tag debian/0.12.1-2 at Debian Med / gffread
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debian-med
Graham Inggs pushed new tag debian/0.12.1-3 at Debian Med / gffread
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debian-med
Graham Inggs pushed to branch master at Debian Med / gffread
Commits:
66b7741a by Graham Inggs at 2020-12-06T01:48:55+02:00
Skip two failing tests from gff2aplot
- - - - -
e10e1814 by Graham Inggs at 2020-12-06T01:51:13+02:00
Adjust autopkgtest dependencies for various architectures
Graham Inggs pushed new tag debian/1.5.6-3 at Debian Med / circlator
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debian-med
Graham Inggs pushed to branch master at Debian Med / circlator
Commits:
e8054d59 by Graham Inggs at 2020-12-02T09:41:42+02:00
Add a test dependency on python3-all, upload to unstable
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2 changed files:
- debian/changelog
- debian/tests/control
Changes
Graham Inggs pushed new tag debian/0.20140804.1_dfsg.1-4 at Debian Med / mricron
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Graham Inggs pushed new tag debian/0.20140804.1_dfsg.1-3.1 at Debian Med /
mricron
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Graham Inggs pushed new tag debian/1.5.3-4 at Debian Med / ciftilib
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debian-med
Graham Inggs pushed to branch debian/master at Debian Med / ciftilib
Commits:
df7f2805 by Graham Inggs at 2020-10-04T14:36:18+02:00
Allow stderr output in autopkgtests for GCC warnings on armhf
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2 changed files:
- debian/changelog
- debian/tests/control
Changes
Graham Inggs pushed new tag debian/1.72+dfsg-2 at Debian Med / python-biopython
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Graham Inggs pushed to branch master at Debian Med / python-biopython
Commits:
66f48b6c by Graham Inggs at 2018-12-05T11:40:14Z
Clean up some trailing whitespace in debian/* files
- - - - -
93ba4c4b by Graham Inggs at 2018-12-05T11:43:25Z
Prepare for upload to unstable
- - - - -
3 changed
Graham Inggs pushed to branch master at Debian Med / python-biopython
Commits:
a5a7c263 by Graham Inggs at 2018-12-05T11:09:22Z
Fix compatibility with ReportLab 3.5
- - - - -
3 changed files:
- debian/changelog
- + debian/patches/reportlab3.5.patch
- debian/patches/series
Changes
Graham Inggs pushed new tag debian/1.0-3 at Debian Med / roguenarok
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debian-med-commit
Graham Inggs pushed to branch master at Debian Med / roguenarok
Commits:
8d87a2f0 by Graham Inggs at 2018-08-29T09:55:19Z
Propagate hardening CPPFLAGS, avoid FTBFS with -Wl,--as-needed
- - - - -
07384bbf by Graham Inggs at 2018-08-29T10:06:40Z
Prepare for upload to unstable
- - - - -
2
Graham Inggs pushed new tag debian/1.3.11+svn20110227.4616-2 at Debian Med /
libgenome
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Graham Inggs pushed to branch master at Debian Med / libgenome
Commits:
9896894e by Graham Inggs at 2018-08-13T15:09:25Z
Update symbols for GCC 8
- - - - -
303d19b3 by Graham Inggs at 2018-08-13T15:11:15Z
Rename libgenome0.symbols - libgenome0.symbols.amd64
- - - - -
10e6b730 by Graham Inggs
Graham Inggs pushed new tag debian/2.1.21+git20171002.4becff7-2 at Debian Med /
libncl
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Graham Inggs pushed to branch master at Debian Med / libsmithwaterman
Commits:
685a1414 by Graham Inggs at 2018-08-13T11:18:26Z
Mark specific symbols for mips and mipsel as optional, upload to unstable
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2 changed files:
- debian/changelog
- debian/libsmithwaterman0.symbols
Changes
Graham Inggs pushed new tag debian/0.0+git20160702.2610e25-7 at Debian Med /
libsmithwaterman
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Graham Inggs pushed new tag debian/0.0+git20160702.2610e25-6 at Debian Med /
libsmithwaterman
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Graham Inggs pushed to branch master at Debian Med / libsmithwaterman
Commits:
2ae91968 by Graham Inggs at 2018-08-06T11:04:21Z
Prepare for upload to unstable
- - - - -
1 changed file:
- debian/changelog
Changes:
=
debian/changelog
Graham Inggs pushed to branch master at Debian Med / libsmithwaterman
Commits:
0f6a505a by Graham Inggs at 2018-08-06T10:25:48Z
Add missing symbol, drop Lintian override
- - - - -
2ad603a0 by Graham Inggs at 2018-08-06T10:28:55Z
Strip Debian revision from two symbols
- - - - -
be62057e
Graham Inggs pushed new tag debian/3.7+4565-4 at Debian Med / libmuscle
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debian-med
Graham Inggs pushed to branch master at Debian Med / libmuscle
Commits:
eb47ef53 by Graham Inggs at 2018-07-13T12:29:52+02:00
Team upload
- - - - -
1 changed file:
- debian/changelog
Changes:
=
debian/changelog
Graham Inggs pushed to branch master at Debian Med / libmuscle
Commits:
e182fdbf by Graham Inggs at 2018-07-13T12:28:01+02:00
Prepare for upload to unstable
- - - - -
1 changed file:
- debian/changelog
Changes:
=
debian/changelog
Graham Inggs pushed to branch master at Debian Med / libmuscle
Commits:
124692ec by Graham Inggs at 2018-07-13T12:05:55+02:00
Mark symbols that are optimized away when built with -O3
- - - - -
2 changed files:
- debian/changelog
- debian/libmuscle1.symbols
Changes
Graham Inggs pushed to branch master at Debian Med / libmuscle
Commits:
3cf6c5b5 by Graham Inggs at 2018-07-13T12:01:08+02:00
Adjust libmuscle1.symbols for 32-/64-bit architectures
- - - - -
2 changed files:
- debian/changelog
- debian/libmuscle1.symbols
Changes
Graham Inggs pushed new tag debian/3%3.3.20180621-2 at Debian Med / phyml
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debian
Graham Inggs pushed to branch master at Debian Med / phyml
Commits:
5462f892 by Graham Inggs at 2018-06-27T18:25:43+02:00
Prepare for upload to unstable
- - - - -
1 changed file:
- debian/changelog
Changes:
=
debian/changelog
Graham Inggs pushed new tag debian/1.5.0+git20180606.43fcd9d+dfsg-2 at Debian
Med / python-pbcore
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Graham Inggs pushed to branch master at Debian Med / python-pbcore
Commits:
23fa04a0 by Graham Inggs at 2018-06-27T15:09:32+02:00
Add test Depends: python-h5py, upload to unstable
- - - - -
2 changed files:
- debian/changelog
- debian/tests/control
Changes
Graham Inggs pushed to branch master at Debian Med / phyml
Commits:
de42d5ae by Graham Inggs at 2018-06-27T14:58:48+02:00
Allow MPI oversubscription in autopkgtests
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2 changed files:
- debian/changelog
- debian/tests/run-unit-test
Changes
Graham Inggs pushed new tag debian/0.3.2-2 at Debian Med / libpll
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debian-med-commit mailing
Graham Inggs pushed to branch master at Debian Med / libpll
Commits:
d55bd381 by Graham Inggs at 2018-06-23T20:15:43+02:00
Update debian/copyright
- - - - -
c16f4dfa by Graham Inggs at 2018-06-23T20:17:15+02:00
Prepare for upload to unstable
- - - - -
2 changed files:
- debian/changelog
Graham Inggs pushed new tag debian/0.0+git20160702.2610e25-4 at Debian Med /
libsmithwaterman
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Graham Inggs pushed to branch master at Debian Med / libsmithwaterman
Commits:
dd3dfdc5 by Graham Inggs at 2018-06-12T21:31:44+02:00
Fix symbol that seems to be exported on all architectures
- - - - -
11d80b1c by Graham Inggs at 2018-06-12T21:52:30+02:00
Mark symbols that are optimized away
Graham Inggs pushed new tag debian/2.3.1-6 at Debian Med / ray
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Graham Inggs pushed to branch master at Debian Med / ray
Commits:
312fbf41 by Graham Inggs at 2018-05-17T14:50:43+02:00
Switch to debhelper 11
- - - - -
3c3669b9 by Graham Inggs at 2018-05-17T14:52:01+02:00
Use HTTPS for copyright format
- - - - -
eaa27acc by Graham Inggs at 2018-05-17T14:56
Graham Inggs pushed to branch master at Debian Med / ray
Commits:
815c1cb5 by Graham Inggs at 2018-05-16T14:43:23+02:00
Allow node oversubscription in autopkgtest
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2 changed files:
- debian/changelog
- debian/tests/run-unit-test
Changes
Graham Inggs pushed new tag debian/0.14+ds-2 at Debian Med / python-pysam
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debian
Graham Inggs pushed to branch master at Debian Med / python-pysam
Commits:
78a7073d by Graham Inggs at 2018-02-19T11:58:59+02:00
Add Python 2.7 compatibility symlink for libchtslib.so
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a9441105 by Graham Inggs at 2018-02-19T12:01:24+02:00
Update Vcs-* URIs for move to salsa.debian.org
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ginggs pushed a commit to branch master
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commit ce48c26201f9548fb7bb42da0eab547e53db282b
Author: Graham Inggs <gin...@debian.org>
Date: Fri Feb 2 12:11:51 2018 +0200
Link -lbam before -lz to fix
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ginggs pushed a change to annotated tag debian/1.6-4
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from f722e30 Upload to unstable
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commit 931933e085e8a0d61fd17c1c7e4654a3c9eaffb9
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Date: Sat Dec 23 09:05:16 2017 +0200
Reduce per-thread memory
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from 1421cfd Update debian/changelog
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commit 1ef8517098ba2cbc81814990201a8aa14542c31d
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Prepare for upload to un
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commit c722ac7c8ee79441fd8798dcfae4f797a49b1c02
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Ship new files win/rand.c a
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commit 3e830b572446d24e7163cb183d30e2ce402976bb
Author: Graham Inggs <gin...@debian.org>
Date: Thu Dec 21 15:59:15 2017 +0200
Fix passing of hardening
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commit 1421cfdc570552723c3f0d1bb974a34dbe759e4f
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Date: Thu Dec 21 16:38:48 2017 +0200
Update debian/cha
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commit f9b6b9218df36bc451302b357b7814c90fc566cf
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Date: Thu Dec 21 16:00:55 2017 +0200
Rename drop_march_option
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commit bfbcd50ab7c2b90a717b15cc4afe8ea8cfc6aba9
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Revert commit 9e67702
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from 393c6e1 Upload to unstable
new 3e830b5 Fix passing of hardening flags in CXXFLAGS instead of
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ginggs pushed a change to annotated tag debian/1.6-3
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commit 6886c3acb3395f088e25a53dfe7fdbbf14a6131b
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Prepare for upload to un
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commit fb82f631a80a7db8ae4f74b82359e3255591f5c6
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Date: Wed Dec 20 16:21:46 2017 +0200
Fix autopkgtest on i386 with
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commit b839a102b6b2b819d69b9e71ccf3d518014279b4
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Date: Wed Dec 20 16:18:33 2017 +0200
Ship a copy of cram h
-Version: 4.1.0
Upload to unstable
Secure URI in watch file
Update upstream source from tag 'upstream/0.99.1'
New upstream version
Standards-Version: 4.1.1
Testsuite: autopkgtest-pkg-r
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Updated version 1.0.0 from
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New upstream version 1.0.0
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commit baa051abb9088ba4041a93523b45ae851c7dd316
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commit b8b44172a651abb43b8d2591f2fbdd04c1e87c39
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Date: Tue Dec 19 20:49:11 2017 +0200
pr
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commit 782ffa8da5614d5e7d3439c84fbb14198870bc6d
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Date: Tue Dec 19 20:54:53 2017 +0200
New up
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commit 768c4aa204fba0a4e22d32f7415821dccd70480e
Author: Graham Inggs <gin...@debian.org>
Date: Tue Dec 19 20:49:02 2017 +0200
New up
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new 9e67702 Disable PIE on x32
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commit 9e677022c3c9f3038a738efaa42fa8541fe3b8f6
Author: Graham Inggs <gin...@debian.org>
Date: Tue Dec 19 21:27:56 2017 +0200
Disable PIE on x32
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commit 27bec5a256b18e6ac7fce0fbae00227462e5bb53
Author: Graham Inggs <gin...@debian.org>
Date: Fri Dec 1 17:02:50 2017 +0200
Run r-cran-praise's
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new 27bec5a Run r-cran-praise's tests instead of r-cran-crayon's
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new 3e44df6 Add test Depends: r-cran-fastmatch
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commit 3e44df632923ec5e48ee4ff0e0f9dfb281661e56
Author: Graham Inggs <gin...@debian.org>
Date: Mon Nov 27 14:00:57 2017 +0200
Add test Depends:
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from cf184fb Add debian/clean to fix FTBFSx2
new dd18edf Fix autopkgtests: Skip tests failing due to FP precision
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commit dd18edf69cad230ca23034c7d7ac15c164853711
Author: Graham Inggs <gin...@debian.org>
Date: Sun Nov 26 13:55:17 2017 +0200
Fix autopkgtests
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commit cf184fbbf8f4f5691db0be00a4b746c5f17e6b69
Author: Graham Inggs <gin...@debian.org>
Date: Sun Nov 26 09:40:45 2017 +0200
Add debian/clean
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from 4f98677 Fix autopkgtests: Update debian/README.test
new cf184fb Add debian/clean to fix FTBFSx2
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commit ba2bd760fd5ebb48044b70dbc8669b5ff8def788
Author: Graham Inggs <gin...@debian.org>
Date: Sun Nov 26 08:09:41 2017 +0200
Fix autopkgtests: I
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commit 4f986775ceede4d1c6e00b2c2335af8a7910fefc
Author: Graham Inggs <gin...@debian.org>
Date: Sun Nov 26 08:13:59 2017 +0200
Fix autopkgtests:
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commit 0167102495d0b499bcbf08d99d281f2ea2c4be3a
Author: Graham Inggs <gin...@debian.org>
Date: Sun Nov 26 08:12:52 2017 +0200
Fix autopkgtests:
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from 1d7565b Changelog entry for 1.1.2-2.
new ba2bd76 Fix autopkgtests: Install testthat tests as docs
new 0167102 Fix
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commit 1da7c3b7d75af5a53b6f36dc139b6e37865fbe7f
Author: Graham Inggs <gin...@debian.org>
Date: Sun Nov 26 08:03:56 2017 +0200
Fix autopkgtests: Skip
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commit fff092e47ee355ba7137ac72f2f7bf4abeb98a2a
Author: Graham Inggs <gin...@debian.org>
Date: Sun Nov 26 08:02:25 2017 +0200
Fix autopkgtests:
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