[med-svn] [Git][med-team/python-iow][master] 2 commits: Drop the runtime dependency on Cython

2023-12-10 Thread Graham Inggs (@ginggs)
Graham Inggs pushed to branch master at Debian Med / python-iow Commits: 7ed9d4df by Graham Inggs at 2023-12-10T13:05:53-01:00 Drop the runtime dependency on Cython - - - - - a12fccb9 by Graham Inggs at 2023-12-10T13:06:31-01:00 Prepare for team upload to unstable - - - - - 3 changed files

[med-svn] [Git][med-team/python-iow] Pushed new tag debian/1.0.6-3

2023-12-10 Thread Graham Inggs (@ginggs)
Graham Inggs pushed new tag debian/1.0.6-3 at Debian Med / python-iow -- View it on GitLab: https://salsa.debian.org/med-team/python-iow/-/tree/debian/1.0.6-3 You're receiving this email because of your account on salsa.debian.org. ___ debian-med

[med-svn] [Git][med-team/python-skbio] Pushed new tag debian/0.5.8-4.1

2023-12-10 Thread Graham Inggs (@ginggs)
Graham Inggs pushed new tag debian/0.5.8-4.1 at Debian Med / python-skbio -- View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/tree/debian/0.5.8-4.1 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/python-skbio] Pushed new branch python3.12

2023-12-10 Thread Graham Inggs (@ginggs)
Graham Inggs pushed new branch python3.12 at Debian Med / python-skbio -- View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/tree/python3.12 You're receiving this email because of your account on salsa.debian.org. ___ debian-med

[med-svn] [Git][med-team/pyscanfcs] Pushed new tag debian/0.3.6+ds-3

2022-07-21 Thread Graham Inggs (@ginggs)
Graham Inggs pushed new tag debian/0.3.6+ds-3 at Debian Med / pyscanfcs -- View it on GitLab: https://salsa.debian.org/med-team/pyscanfcs/-/tree/debian/0.3.6+ds-3 You're receiving this email because of your account on salsa.debian.org. ___ debian

[med-svn] [Git][med-team/pyscanfcs][master] 3 commits: Build-Depends: python3-dev instead of python3-all-dev

2022-07-21 Thread Graham Inggs (@ginggs)
Graham Inggs pushed to branch master at Debian Med / pyscanfcs Commits: b383be06 by Graham Inggs at 2022-07-21T21:57:29+02:00 Build-Depends: python3-dev instead of python3-all-dev - - - - - 3606887b by Graham Inggs at 2022-07-21T21:59:54+02:00 Bump Standards-Version to 4.6.1

[med-svn] [Git][med-team/python-biom-format] Pushed new tag debian/2.1.10-4

2022-04-11 Thread Graham Inggs (@ginggs)
Graham Inggs pushed new tag debian/2.1.10-4 at Debian Med / python-biom-format -- View it on GitLab: https://salsa.debian.org/med-team/python-biom-format/-/tree/debian/2.1.10-4 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/python-biom-format][master] 2 commits: Enable build on all architectures

2022-04-11 Thread Graham Inggs (@ginggs)
Graham Inggs pushed to branch master at Debian Med / python-biom-format Commits: 6e3744b0 by Graham Inggs at 2022-04-11T21:46:32+02:00 Enable build on all architectures - - - - - 07a391ec by Graham Inggs at 2022-04-11T21:47:51+02:00 Prepare for upload to unstable - - - - - 2 changed files

[med-svn] [Git][med-team/python-biom-format] Pushed new tag debian/2.1.10-3

2021-12-03 Thread Graham Inggs (@ginggs)
Graham Inggs pushed new tag debian/2.1.10-3 at Debian Med / python-biom-format -- View it on GitLab: https://salsa.debian.org/med-team/python-biom-format/-/tree/debian/2.1.10-3 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/python-biom-format][master] Prepare for upload to unstable

2021-12-03 Thread Graham Inggs (@ginggs)
Graham Inggs pushed to branch master at Debian Med / python-biom-format Commits: 12783594 by Graham Inggs at 2021-12-03T18:23:14+02:00 Prepare for upload to unstable - - - - - 1 changed file: - debian/changelog Changes: = debian/changelog

[med-svn] [Git][med-team/python-skbio] Pushed new tag debian/0.5.6-6

2021-12-03 Thread Graham Inggs (@ginggs)
Graham Inggs pushed new tag debian/0.5.6-6 at Debian Med / python-skbio -- View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/tree/debian/0.5.6-6 You're receiving this email because of your account on salsa.debian.org. ___ debian

[med-svn] [Git][med-team/uc-echo][master] 6 commits: Do not build 32-bit binaries for the wrong architecture

2021-11-07 Thread Graham Inggs (@ginggs)
Graham Inggs pushed to branch master at Debian Med / uc-echo Commits: 508261d3 by Graham Inggs at 2021-11-07T13:19:46+02:00 Do not build 32-bit binaries for the wrong architecture - - - - - 83acbd12 by Graham Inggs at 2021-11-07T13:19:51+02:00 Build-Depend on python3 instead of python3-all

[med-svn] [Git][med-team/uc-echo] Pushed new tag debian/1.12-16

2021-11-07 Thread Graham Inggs (@ginggs)
Graham Inggs pushed new tag debian/1.12-16 at Debian Med / uc-echo -- View it on GitLab: https://salsa.debian.org/med-team/uc-echo/-/tree/debian/1.12-16 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit

[med-svn] [Git][med-team/mricron] Pushed new tag debian/1.0.20190902+dfsg-2

2021-02-11 Thread Graham Inggs
Graham Inggs pushed new tag debian/1.0.20190902+dfsg-2 at Debian Med / mricron -- View it on GitLab: https://salsa.debian.org/med-team/mricron/-/tree/debian/1.0.20190902+dfsg-2 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/mricron][master] Prepare for upload to unstable

2021-02-11 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / mricron Commits: 32d65a3b by Graham Inggs at 2021-02-11T20:36:45+02:00 Prepare for upload to unstable - - - - - 3 changed files: - debian/changelog - + debian/patches/64bit.patch - debian/patches/series Changes

[med-svn] [Git][med-team/gffread] Pushed new tag debian/0.12.1-2

2020-12-05 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.12.1-2 at Debian Med / gffread -- View it on GitLab: https://salsa.debian.org/med-team/gffread/-/tree/debian/0.12.1-2 You're receiving this email because of your account on salsa.debian.org. ___ debian-med

[med-svn] [Git][med-team/gffread] Pushed new tag debian/0.12.1-3

2020-12-05 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.12.1-3 at Debian Med / gffread -- View it on GitLab: https://salsa.debian.org/med-team/gffread/-/tree/debian/0.12.1-3 You're receiving this email because of your account on salsa.debian.org. ___ debian-med

[med-svn] [Git][med-team/gffread][master] 5 commits: Skip two failing tests from gff2aplot

2020-12-05 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / gffread Commits: 66b7741a by Graham Inggs at 2020-12-06T01:48:55+02:00 Skip two failing tests from gff2aplot - - - - - e10e1814 by Graham Inggs at 2020-12-06T01:51:13+02:00 Adjust autopkgtest dependencies for various architectures

[med-svn] [Git][med-team/circlator] Pushed new tag debian/1.5.6-3

2020-12-02 Thread Graham Inggs
Graham Inggs pushed new tag debian/1.5.6-3 at Debian Med / circlator -- View it on GitLab: https://salsa.debian.org/med-team/circlator/-/tree/debian/1.5.6-3 You're receiving this email because of your account on salsa.debian.org. ___ debian-med

[med-svn] [Git][med-team/circlator][master] Add a test dependency on python3-all, upload to unstable

2020-12-02 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / circlator Commits: e8054d59 by Graham Inggs at 2020-12-02T09:41:42+02:00 Add a test dependency on python3-all, upload to unstable - - - - - 2 changed files: - debian/changelog - debian/tests/control Changes

[med-svn] [Git][med-team/mricron] Pushed new tag debian/0.20140804.1_dfsg.1-4

2020-10-25 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.20140804.1_dfsg.1-4 at Debian Med / mricron -- View it on GitLab: https://salsa.debian.org/med-team/mricron/-/tree/debian/0.20140804.1_dfsg.1-4 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/mricron] Pushed new tag debian/0.20140804.1_dfsg.1-3.1

2020-10-25 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.20140804.1_dfsg.1-3.1 at Debian Med / mricron -- View it on GitLab: https://salsa.debian.org/med-team/mricron/-/tree/debian/0.20140804.1_dfsg.1-3.1 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/ciftilib] Pushed new tag debian/1.5.3-4

2020-10-04 Thread Graham Inggs
Graham Inggs pushed new tag debian/1.5.3-4 at Debian Med / ciftilib -- View it on GitLab: https://salsa.debian.org/med-team/ciftilib/-/tree/debian/1.5.3-4 You're receiving this email because of your account on salsa.debian.org. ___ debian-med

[med-svn] [Git][med-team/ciftilib][debian/master] Allow stderr output in autopkgtests for GCC warnings on armhf

2020-10-04 Thread Graham Inggs
Graham Inggs pushed to branch debian/master at Debian Med / ciftilib Commits: df7f2805 by Graham Inggs at 2020-10-04T14:36:18+02:00 Allow stderr output in autopkgtests for GCC warnings on armhf - - - - - 2 changed files: - debian/changelog - debian/tests/control Changes

[med-svn] [Git][med-team/python-biopython] Pushed new tag debian/1.72+dfsg-2

2018-12-05 Thread Graham Inggs
Graham Inggs pushed new tag debian/1.72+dfsg-2 at Debian Med / python-biopython -- View it on GitLab: https://salsa.debian.org/med-team/python-biopython/tree/debian/1.72+dfsg-2 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/python-biopython][master] 2 commits: Clean up some trailing whitespace in debian/* files

2018-12-05 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / python-biopython Commits: 66f48b6c by Graham Inggs at 2018-12-05T11:40:14Z Clean up some trailing whitespace in debian/* files - - - - - 93ba4c4b by Graham Inggs at 2018-12-05T11:43:25Z Prepare for upload to unstable - - - - - 3 changed

[med-svn] [Git][med-team/python-biopython][master] Fix compatibility with ReportLab 3.5

2018-12-05 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / python-biopython Commits: a5a7c263 by Graham Inggs at 2018-12-05T11:09:22Z Fix compatibility with ReportLab 3.5 - - - - - 3 changed files: - debian/changelog - + debian/patches/reportlab3.5.patch - debian/patches/series Changes

[med-svn] [Git][med-team/roguenarok] Pushed new tag debian/1.0-3

2018-08-29 Thread Graham Inggs
Graham Inggs pushed new tag debian/1.0-3 at Debian Med / roguenarok -- View it on GitLab: https://salsa.debian.org/med-team/roguenarok/tree/debian/1.0-3 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit

[med-svn] [Git][med-team/roguenarok][master] 2 commits: Propagate hardening CPPFLAGS, avoid FTBFS with -Wl, --as-needed

2018-08-29 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / roguenarok Commits: 8d87a2f0 by Graham Inggs at 2018-08-29T09:55:19Z Propagate hardening CPPFLAGS, avoid FTBFS with -Wl,--as-needed - - - - - 07384bbf by Graham Inggs at 2018-08-29T10:06:40Z Prepare for upload to unstable - - - - - 2

[med-svn] [Git][med-team/libgenome] Pushed new tag debian/1.3.11+svn20110227.4616-2

2018-08-13 Thread Graham Inggs
Graham Inggs pushed new tag debian/1.3.11+svn20110227.4616-2 at Debian Med / libgenome -- View it on GitLab: https://salsa.debian.org/med-team/libgenome/tree/debian/1.3.11+svn20110227.4616-2 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/libgenome][master] 3 commits: Update symbols for GCC 8

2018-08-13 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libgenome Commits: 9896894e by Graham Inggs at 2018-08-13T15:09:25Z Update symbols for GCC 8 - - - - - 303d19b3 by Graham Inggs at 2018-08-13T15:11:15Z Rename libgenome0.symbols - libgenome0.symbols.amd64 - - - - - 10e6b730 by Graham Inggs

[med-svn] [Git][med-team/libncl] Pushed new tag debian/2.1.21+git20171002.4becff7-2

2018-08-13 Thread Graham Inggs
Graham Inggs pushed new tag debian/2.1.21+git20171002.4becff7-2 at Debian Med / libncl -- View it on GitLab: https://salsa.debian.org/med-team/libncl/tree/debian/2.1.21+git20171002.4becff7-2 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/libsmithwaterman][master] Mark specific symbols for mips and mipsel as optional, upload to unstable

2018-08-13 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libsmithwaterman Commits: 685a1414 by Graham Inggs at 2018-08-13T11:18:26Z Mark specific symbols for mips and mipsel as optional, upload to unstable - - - - - 2 changed files: - debian/changelog - debian/libsmithwaterman0.symbols Changes

[med-svn] [Git][med-team/libsmithwaterman] Pushed new tag debian/0.0+git20160702.2610e25-7

2018-08-13 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.0+git20160702.2610e25-7 at Debian Med / libsmithwaterman -- View it on GitLab: https://salsa.debian.org/med-team/libsmithwaterman/tree/debian/0.0+git20160702.2610e25-7 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/libsmithwaterman] Pushed new tag debian/0.0+git20160702.2610e25-6

2018-08-06 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.0+git20160702.2610e25-6 at Debian Med / libsmithwaterman -- View it on GitLab: https://salsa.debian.org/med-team/libsmithwaterman/tree/debian/0.0+git20160702.2610e25-6 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/libsmithwaterman][master] Prepare for upload to unstable

2018-08-06 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libsmithwaterman Commits: 2ae91968 by Graham Inggs at 2018-08-06T11:04:21Z Prepare for upload to unstable - - - - - 1 changed file: - debian/changelog Changes: = debian/changelog

[med-svn] [Git][med-team/libsmithwaterman][master] 3 commits: Add missing symbol, drop Lintian override

2018-08-06 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libsmithwaterman Commits: 0f6a505a by Graham Inggs at 2018-08-06T10:25:48Z Add missing symbol, drop Lintian override - - - - - 2ad603a0 by Graham Inggs at 2018-08-06T10:28:55Z Strip Debian revision from two symbols - - - - - be62057e

[med-svn] [Git][med-team/libmuscle] Pushed new tag debian/3.7+4565-4

2018-07-13 Thread Graham Inggs
Graham Inggs pushed new tag debian/3.7+4565-4 at Debian Med / libmuscle -- View it on GitLab: https://salsa.debian.org/med-team/libmuscle/tree/debian/3.7+4565-4 You're receiving this email because of your account on salsa.debian.org. ___ debian-med

[med-svn] [Git][med-team/libmuscle][master] Team upload

2018-07-13 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libmuscle Commits: eb47ef53 by Graham Inggs at 2018-07-13T12:29:52+02:00 Team upload - - - - - 1 changed file: - debian/changelog Changes: = debian/changelog

[med-svn] [Git][med-team/libmuscle][master] Prepare for upload to unstable

2018-07-13 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libmuscle Commits: e182fdbf by Graham Inggs at 2018-07-13T12:28:01+02:00 Prepare for upload to unstable - - - - - 1 changed file: - debian/changelog Changes: = debian/changelog

[med-svn] [Git][med-team/libmuscle][master] Mark symbols that are optimized away when built with -O3

2018-07-13 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libmuscle Commits: 124692ec by Graham Inggs at 2018-07-13T12:05:55+02:00 Mark symbols that are optimized away when built with -O3 - - - - - 2 changed files: - debian/changelog - debian/libmuscle1.symbols Changes

[med-svn] [Git][med-team/libmuscle][master] Adjust libmuscle1.symbols for 32-/64-bit architectures

2018-07-13 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libmuscle Commits: 3cf6c5b5 by Graham Inggs at 2018-07-13T12:01:08+02:00 Adjust libmuscle1.symbols for 32-/64-bit architectures - - - - - 2 changed files: - debian/changelog - debian/libmuscle1.symbols Changes

[med-svn] [Git][med-team/phyml] Pushed new tag debian/3%3.3.20180621-2

2018-06-27 Thread Graham Inggs
Graham Inggs pushed new tag debian/3%3.3.20180621-2 at Debian Med / phyml -- View it on GitLab: https://salsa.debian.org/med-team/phyml/tree/debian/3%253.3.20180621-2 You're receiving this email because of your account on salsa.debian.org. ___ debian

[med-svn] [Git][med-team/phyml][master] Prepare for upload to unstable

2018-06-27 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / phyml Commits: 5462f892 by Graham Inggs at 2018-06-27T18:25:43+02:00 Prepare for upload to unstable - - - - - 1 changed file: - debian/changelog Changes: = debian/changelog

[med-svn] [Git][med-team/python-pbcore] Pushed new tag debian/1.5.0+git20180606.43fcd9d+dfsg-2

2018-06-27 Thread Graham Inggs
Graham Inggs pushed new tag debian/1.5.0+git20180606.43fcd9d+dfsg-2 at Debian Med / python-pbcore -- View it on GitLab: https://salsa.debian.org/med-team/python-pbcore/tree/debian/1.5.0+git20180606.43fcd9d+dfsg-2 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/python-pbcore][master] Add test Depends: python-h5py, upload to unstable

2018-06-27 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / python-pbcore Commits: 23fa04a0 by Graham Inggs at 2018-06-27T15:09:32+02:00 Add test Depends: python-h5py, upload to unstable - - - - - 2 changed files: - debian/changelog - debian/tests/control Changes

[med-svn] [Git][med-team/phyml][master] Allow MPI oversubscription in autopkgtests

2018-06-27 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / phyml Commits: de42d5ae by Graham Inggs at 2018-06-27T14:58:48+02:00 Allow MPI oversubscription in autopkgtests - - - - - 2 changed files: - debian/changelog - debian/tests/run-unit-test Changes

[med-svn] [Git][med-team/libpll] Pushed new tag debian/0.3.2-2

2018-06-23 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.3.2-2 at Debian Med / libpll -- View it on GitLab: https://salsa.debian.org/med-team/libpll/tree/debian/0.3.2-2 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing

[med-svn] [Git][med-team/libpll][master] 2 commits: Update debian/copyright

2018-06-23 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libpll Commits: d55bd381 by Graham Inggs at 2018-06-23T20:15:43+02:00 Update debian/copyright - - - - - c16f4dfa by Graham Inggs at 2018-06-23T20:17:15+02:00 Prepare for upload to unstable - - - - - 2 changed files: - debian/changelog

[med-svn] [Git][med-team/libsmithwaterman] Pushed new tag debian/0.0+git20160702.2610e25-4

2018-06-12 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.0+git20160702.2610e25-4 at Debian Med / libsmithwaterman -- View it on GitLab: https://salsa.debian.org/med-team/libsmithwaterman/tree/debian/0.0+git20160702.2610e25-4 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/libsmithwaterman][master] 3 commits: Fix symbol that seems to be exported on all architectures

2018-06-12 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / libsmithwaterman Commits: dd3dfdc5 by Graham Inggs at 2018-06-12T21:31:44+02:00 Fix symbol that seems to be exported on all architectures - - - - - 11d80b1c by Graham Inggs at 2018-06-12T21:52:30+02:00 Mark symbols that are optimized away

[med-svn] [Git][med-team/ray] Pushed new tag debian/2.3.1-6

2018-05-17 Thread Graham Inggs
Graham Inggs pushed new tag debian/2.3.1-6 at Debian Med / ray --- View it on GitLab: https://salsa.debian.org/med-team/ray/tree/debian/2.3.1-6 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit mailing list

[med-svn] [Git][med-team/ray][master] 6 commits: Switch to debhelper 11

2018-05-17 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / ray Commits: 312fbf41 by Graham Inggs at 2018-05-17T14:50:43+02:00 Switch to debhelper 11 - - - - - 3c3669b9 by Graham Inggs at 2018-05-17T14:52:01+02:00 Use HTTPS for copyright format - - - - - eaa27acc by Graham Inggs at 2018-05-17T14:56

[med-svn] [Git][med-team/ray][master] Allow node oversubscription in autopkgtest

2018-05-16 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / ray Commits: 815c1cb5 by Graham Inggs at 2018-05-16T14:43:23+02:00 Allow node oversubscription in autopkgtest - - - - - 2 changed files: - debian/changelog - debian/tests/run-unit-test Changes

[med-svn] [Git][med-team/python-pysam] Pushed new tag debian/0.14+ds-2

2018-04-22 Thread Graham Inggs
Graham Inggs pushed new tag debian/0.14+ds-2 at Debian Med / python-pysam --- View it on GitLab: https://salsa.debian.org/med-team/python-pysam/tree/debian/0.14+ds-2 You're receiving this email because of your account on salsa.debian.org. ___ debian

[med-svn] [Git][med-team/python-pysam][master] 4 commits: Add Python 2.7 compatibility symlink for libchtslib.so

2018-02-19 Thread Graham Inggs
Graham Inggs pushed to branch master at Debian Med / python-pysam Commits: 78a7073d by Graham Inggs at 2018-02-19T11:58:59+02:00 Add Python 2.7 compatibility symlink for libchtslib.so - - - - - a9441105 by Graham Inggs at 2018-02-19T12:01:24+02:00 Update Vcs-* URIs for move to salsa.debian.org

[med-svn] [bitseq] 01/01: Link -lbam before -lz to fix build with -Wl, --as-needed

2018-02-02 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository bitseq. commit ce48c26201f9548fb7bb42da0eab547e53db282b Author: Graham Inggs <gin...@debian.org> Date: Fri Feb 2 12:11:51 2018 +0200 Link -lbam before -lz to fix

[med-svn] samtools annotated tag debian/1.6-4 created (now c744814)

2017-12-22 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to annotated tag debian/1.6-4 in repository samtools. at c744814 (tag) tagging 931933e085e8a0d61fd17c1c7e4654a3c9eaffb9 (commit) replaces upstream/1.6 tagged by Graham Inggs

[med-svn] samtools branch master updated (f722e30 -> 931933e)

2017-12-22 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository samtools. from f722e30 Upload to unstable new 931933e Reduce per-thread memory limit of sort tests, upload to unstable The 1 revisions listed above as

[med-svn] samtools 01/01: Reduce per-thread memory limit of sort tests, upload to unstable

2017-12-22 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository samtools. commit 931933e085e8a0d61fd17c1c7e4654a3c9eaffb9 Author: Graham Inggs <gin...@debian.org> Date: Sat Dec 23 09:05:16 2017 +0200 Reduce per-thread memory

[med-svn] [htslib] annotated tag debian/1.6-4 created (now f12e9ef)

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to annotated tag debian/1.6-4 in repository htslib. at f12e9ef (tag) tagging c722ac7c8ee79441fd8798dcfae4f797a49b1c02 (commit) replaces debian/1.6-3 tagged by Graham Inggs

[med-svn] [patman] branch master updated (1421cfd -> 1ef8517)

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository patman. from 1421cfd Update debian/changelog new 1ef8517 Prepare for upload to unstable The 1 revisions listed above as "new" are entirely new to this

[med-svn] [patman] 01/01: Prepare for upload to unstable

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository patman. commit 1ef8517098ba2cbc81814990201a8aa14542c31d Author: Graham Inggs <gin...@debian.org> Date: Thu Dec 21 17:29:35 2017 +0200 Prepare for upload to un

[med-svn] [htslib] 01/01: Ship new files win/rand.c and win/rand.h, upload to unstable

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository htslib. commit c722ac7c8ee79441fd8798dcfae4f797a49b1c02 Author: Graham Inggs <gin...@debian.org> Date: Thu Dec 21 17:10:38 2017 +0200 Ship new files win/rand.c a

[med-svn] [htslib] branch master updated (6886c3a -> c722ac7)

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository htslib. from 6886c3a Prepare for upload to unstable new c722ac7 Ship new files win/rand.c and win/rand.h, upload to unstable The 1 revisions listed above

[med-svn] [patman] 01/04: Fix passing of hardening flags in CXXFLAGS instead of CPPFLAGS

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository patman. commit 3e830b572446d24e7163cb183d30e2ce402976bb Author: Graham Inggs <gin...@debian.org> Date: Thu Dec 21 15:59:15 2017 +0200 Fix passing of hardening

[med-svn] [patman] 04/04: Update debian/changelog

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository patman. commit 1421cfdc570552723c3f0d1bb974a34dbe759e4f Author: Graham Inggs <gin...@debian.org> Date: Thu Dec 21 16:38:48 2017 +0200 Update debian/cha

[med-svn] [patman] 02/04: Rename drop_march_option.patch -> makefile.patch

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository patman. commit f9b6b9218df36bc451302b357b7814c90fc566cf Author: Graham Inggs <gin...@debian.org> Date: Thu Dec 21 16:00:55 2017 +0200 Rename drop_march_option

[med-svn] [patman] 03/04: Revert commit 9e67702

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository patman. commit bfbcd50ab7c2b90a717b15cc4afe8ea8cfc6aba9 Author: Graham Inggs <gin...@debian.org> Date: Thu Dec 21 16:04:37 2017 +0200 Revert commit 9e67702 ---

[med-svn] [patman] branch master updated (393c6e1 -> 1421cfd)

2017-12-21 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository patman. from 393c6e1 Upload to unstable new 3e830b5 Fix passing of hardening flags in CXXFLAGS instead of CPPFLAGS new f9b6b92 Rename

[med-svn] [htslib] annotated tag debian/1.6-3 created (now 879beb3)

2017-12-20 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to annotated tag debian/1.6-3 in repository htslib. at 879beb3 (tag) tagging 6886c3acb3395f088e25a53dfe7fdbbf14a6131b (commit) replaces upstream/1.6 tagged by Graham Inggs

[med-svn] [htslib] 03/03: Prepare for upload to unstable

2017-12-20 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository htslib. commit 6886c3acb3395f088e25a53dfe7fdbbf14a6131b Author: Graham Inggs <gin...@debian.org> Date: Wed Dec 20 16:54:25 2017 +0200 Prepare for upload to un

[med-svn] [htslib] branch master updated (5d5de29 -> 6886c3a)

2017-12-20 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository htslib. from 5d5de29 Add missing override, upload to unstable new b839a10 Ship a copy of cram headers in htslib-test instead of using symlinks new

[med-svn] [htslib] 02/03: Fix autopkgtest on i386 with GCC 7

2017-12-20 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository htslib. commit fb82f631a80a7db8ae4f74b82359e3255591f5c6 Author: Graham Inggs <gin...@debian.org> Date: Wed Dec 20 16:21:46 2017 +0200 Fix autopkgtest on i386 with

[med-svn] [htslib] 01/03: Ship a copy of cram headers in htslib-test instead of using symlinks

2017-12-20 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository htslib. commit b839a102b6b2b819d69b9e71ccf3d518014279b4 Author: Graham Inggs <gin...@debian.org> Date: Wed Dec 20 16:18:33 2017 +0200 Ship a copy of cram h

[med-svn] [r-bioc-genomeinfodbdata] annotated tag debian/1.0.0-1 created (now 1e2b581)

2017-12-19 Thread Graham Inggs
-Version: 4.1.0 Upload to unstable Secure URI in watch file Update upstream source from tag 'upstream/0.99.1' New upstream version Standards-Version: 4.1.1 Testsuite: autopkgtest-pkg-r Team upload to unstable Graham Inggs (2): Updated version 1.0.0 from

[med-svn] [r-bioc-genomeinfodbdata] annotated tag upstream/1.0.0 created (now 5ed840a)

2017-12-19 Thread Graham Inggs
by Graham Inggs on Tue Dec 19 20:49:11 2017 +0200 - Log - Upstream version 1.0.0 Graham Inggs (1): New upstream version 1.0.0 --- No new revisions were added

[med-svn] [r-bioc-genomeinfodbdata] 02/03: Updated version 1.0.0 from 'upstream/1.0.0'

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-bioc-genomeinfodbdata. commit baa051abb9088ba4041a93523b45ae851c7dd316 Merge: bcdd7b9 768c4aa Author: Graham Inggs <gin...@debian.org> Date: Tue Dec 19 20:49:11 2017

[med-svn] [r-bioc-genomeinfodbdata] 01/01: pristine-tar data for r-bioc-genomeinfodbdata_1.0.0.orig.tar.gz

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch pristine-tar in repository r-bioc-genomeinfodbdata. commit b8b44172a651abb43b8d2591f2fbdd04c1e87c39 Author: Graham Inggs <gin...@debian.org> Date: Tue Dec 19 20:49:11 2017 +0200 pr

[med-svn] [r-bioc-genomeinfodbdata] 03/03: New upstream release, bump Standards-Version, upload to unstable

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-bioc-genomeinfodbdata. commit 782ffa8da5614d5e7d3439c84fbb14198870bc6d Author: Graham Inggs <gin...@debian.org> Date: Tue Dec 19 20:54:53 2017 +0200 New up

[med-svn] [r-bioc-genomeinfodbdata] branch upstream updated (6385a39 -> 768c4aa)

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch upstream in repository r-bioc-genomeinfodbdata. from 6385a39 New upstream version 0.99.1 adds 768c4aa New upstream version 1.0.0 No new revisions were added by this update.

[med-svn] [r-bioc-genomeinfodbdata] branch master updated (bcdd7b9 -> 782ffa8)

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository r-bioc-genomeinfodbdata. from bcdd7b9 Team upload to unstable new 768c4aa New upstream version 1.0.0 new baa051a Updated version 1.0.0 from

[med-svn] [r-bioc-genomeinfodbdata] branch pristine-tar updated (bee8cff -> b8b4417)

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch pristine-tar in repository r-bioc-genomeinfodbdata. from bee8cff pristine-tar data for r-bioc-genomeinfodbdata_0.99.1.orig.tar.gz new b8b4417 pristine-tar data for

[med-svn] [r-bioc-genomeinfodbdata] 01/03: New upstream version 1.0.0

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-bioc-genomeinfodbdata. commit 768c4aa204fba0a4e22d32f7415821dccd70480e Author: Graham Inggs <gin...@debian.org> Date: Tue Dec 19 20:49:02 2017 +0200 New up

[med-svn] [patman] branch master updated (8033b8e -> 9e67702)

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository patman. from 8033b8e Upload to unstable new 9e67702 Disable PIE on x32 The 1 revisions listed above as "new" are entirely new to this repository and will

[med-svn] [patman] 01/01: Disable PIE on x32

2017-12-19 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository patman. commit 9e677022c3c9f3038a738efaa42fa8541fe3b8f6 Author: Graham Inggs <gin...@debian.org> Date: Tue Dec 19 21:27:56 2017 +0200 Disable PIE on x32 ---

[med-svn] [r-cran-praise] 01/01: Run r-cran-praise's tests instead of r-cran-crayon's

2017-12-01 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-praise. commit 27bec5a256b18e6ac7fce0fbae00227462e5bb53 Author: Graham Inggs <gin...@debian.org> Date: Fri Dec 1 17:02:50 2017 +0200 Run r-cran-praise's

[med-svn] [r-cran-praise] branch master updated (7223b4d -> 27bec5a)

2017-12-01 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository r-cran-praise. from 7223b4d Upload to unstable new 27bec5a Run r-cran-praise's tests instead of r-cran-crayon's The 1 revisions listed above as "new" are

[med-svn] [r-cran-checkmate] branch master updated (2e01906 -> 3e44df6)

2017-11-27 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository r-cran-checkmate. from 2e01906 Upload to unstable new 3e44df6 Add test Depends: r-cran-fastmatch The 1 revisions listed above as "new" are entirely new to

[med-svn] [r-cran-checkmate] 01/01: Add test Depends: r-cran-fastmatch

2017-11-27 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-checkmate. commit 3e44df632923ec5e48ee4ff0e0f9dfb281661e56 Author: Graham Inggs <gin...@debian.org> Date: Mon Nov 27 14:00:57 2017 +0200 Add test Depends:

[med-svn] [r-cran-igraph] branch master updated (cf184fb -> dd18edf)

2017-11-26 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository r-cran-igraph. from cf184fb Add debian/clean to fix FTBFSx2 new dd18edf Fix autopkgtests: Skip tests failing due to FP precision The 1 revisions listed

[med-svn] [r-cran-igraph] 01/01: Fix autopkgtests: Skip tests failing due to FP precision

2017-11-26 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-igraph. commit dd18edf69cad230ca23034c7d7ac15c164853711 Author: Graham Inggs <gin...@debian.org> Date: Sun Nov 26 13:55:17 2017 +0200 Fix autopkgtests

[med-svn] [r-cran-igraph] 01/01: Add debian/clean to fix FTBFSx2

2017-11-25 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-igraph. commit cf184fbbf8f4f5691db0be00a4b746c5f17e6b69 Author: Graham Inggs <gin...@debian.org> Date: Sun Nov 26 09:40:45 2017 +0200 Add debian/clean

[med-svn] [r-cran-igraph] branch master updated (4f98677 -> cf184fb)

2017-11-25 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository r-cran-igraph. from 4f98677 Fix autopkgtests: Update debian/README.test new cf184fb Add debian/clean to fix FTBFSx2 The 1 revisions listed above as "new"

[med-svn] [r-cran-igraph] 01/03: Fix autopkgtests: Install testthat tests as docs

2017-11-25 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-igraph. commit ba2bd760fd5ebb48044b70dbc8669b5ff8def788 Author: Graham Inggs <gin...@debian.org> Date: Sun Nov 26 08:09:41 2017 +0200 Fix autopkgtests: I

[med-svn] [r-cran-igraph] 03/03: Fix autopkgtests: Update debian/README.test

2017-11-25 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-igraph. commit 4f986775ceede4d1c6e00b2c2335af8a7910fefc Author: Graham Inggs <gin...@debian.org> Date: Sun Nov 26 08:13:59 2017 +0200 Fix autopkgtests:

[med-svn] [r-cran-igraph] 02/03: Fix autopkgtests: Update debian/tests/run-unit-test

2017-11-25 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-igraph. commit 0167102495d0b499bcbf08d99d281f2ea2c4be3a Author: Graham Inggs <gin...@debian.org> Date: Sun Nov 26 08:12:52 2017 +0200 Fix autopkgtests:

[med-svn] [r-cran-igraph] branch master updated (1d7565b -> 4f98677)

2017-11-25 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a change to branch master in repository r-cran-igraph. from 1d7565b Changelog entry for 1.1.2-2. new ba2bd76 Fix autopkgtests: Install testthat tests as docs new 0167102 Fix

[med-svn] [r-cran-bbmle] 02/02: Fix autopkgtests: Skip tests which have no saved results

2017-11-25 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-bbmle. commit 1da7c3b7d75af5a53b6f36dc139b6e37865fbe7f Author: Graham Inggs <gin...@debian.org> Date: Sun Nov 26 08:03:56 2017 +0200 Fix autopkgtests: Skip

[med-svn] [r-cran-bbmle] 01/02: Fix autopkgtests: Ignore difference with previously saved workspace

2017-11-25 Thread Graham Inggs
This is an automated email from the git hooks/post-receive script. ginggs pushed a commit to branch master in repository r-cran-bbmle. commit fff092e47ee355ba7137ac72f2f7bf4abeb98a2a Author: Graham Inggs <gin...@debian.org> Date: Sun Nov 26 08:02:25 2017 +0200 Fix autopkgtests:

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