Re: [chain2] configuration façade APIs

2012-07-22 Thread Simone Tripodi
Just tracked CHAIN-72 and assigned to Elijah best, -Simo http://people.apache.org/~simonetripodi/ http://simonetripodi.livejournal.com/ http://twitter.com/simonetripodi http://www.99soft.org/ On Sat, Jul 21, 2012 at 11:27 PM, Simone Tripodi simonetrip...@apache.org wrote: Hi all guys,

Re: [chain2] configuration façade APIs

2012-07-22 Thread Elijah Zupancic
Thanks! On Sat, Jul 21, 2012 at 11:54 PM, Simone Tripodi simonetrip...@apache.org wrote: Just tracked CHAIN-72 and assigned to Elijah best, -Simo http://people.apache.org/~simonetripodi/ http://simonetripodi.livejournal.com/ http://twitter.com/simonetripodi http://www.99soft.org/ On

[GUMP@vmgump]: Project commons-digester3 (in module apache-commons) failed

2012-07-22 Thread Gump
To whom it may engage... This is an automated request, but not an unsolicited one. For more information please visit http://gump.apache.org/nagged.html, and/or contact the folk at gene...@gump.apache.org. Project commons-digester3 has an issue affecting its community integration. This

Re: [Math] Replacing LegendreGaussIntegrator

2012-07-22 Thread Luc Maisonobe
On 22/07/2012 03:43, Gilles Sadowski wrote: Hello. Any objection to the proposals in the following issue: https://issues.apache.org/jira/browse/MATH-827 ? I am fine with this proposal. Having a non-interative quadrature is good and we must provide clear API so users know when they use

Re: [Math] JIRA Road Map panel

2012-07-22 Thread Luc Maisonobe
On 22/07/2012 03:58, Gilles Sadowski wrote: Hi. In this panel https://issues.apache.org/jira/browse/MATH#selectedTab=com.atlassian.jira.plugin.system.project%3Aroadmap-panel there appears sections for the following upcoming versions: 1.3 2.2.1 Nightly builds Shouldn't they be

Re: [Math] Little thought about multi-threading

2012-07-22 Thread Luc Maisonobe
On 22/07/2012 02:29, Gilles Sadowski wrote: On Sat, Jul 21, 2012 at 11:41:45AM -0700, Ted Dunning wrote: The easy way to get much of this benefit is to simply use multi-threaded versions of Atlas via jblas. Probably not viable given the no dependency posture of commons math. When

Re: [Math] Synchronization

2012-07-22 Thread Luc Maisonobe
Hi Gilles, On 22/07/2012 02:43, Gilles Sadowski wrote: On Sat, Jul 21, 2012 at 11:44:43AM -0700, Ted Dunning wrote: Synchronization in low level code is generally really bad. This is the whole point of why Vector was essentially thrown away in Java collections in favor of ArrayList. I

[GUMP@vmgump]: Project commons-proxy-test (in module apache-commons) failed

2012-07-22 Thread Gump
To whom it may engage... This is an automated request, but not an unsolicited one. For more information please visit http://gump.apache.org/nagged.html, and/or contact the folk at gene...@gump.apache.org. Project commons-proxy-test has an issue affecting its community integration. This

Re: [Math] Synchronization

2012-07-22 Thread Gilles Sadowski
Hello. On 22/07/2012 02:43, Gilles Sadowski wrote: On Sat, Jul 21, 2012 at 11:44:43AM -0700, Ted Dunning wrote: Synchronization in low level code is generally really bad. This is the whole point of why Vector was essentially thrown away in Java collections in favor of ArrayList. I

[GUMP@vmgump]: Project commons-scxml-test (in module apache-commons) failed

2012-07-22 Thread Gump
To whom it may engage... This is an automated request, but not an unsolicited one. For more information please visit http://gump.apache.org/nagged.html, and/or contact the folk at gene...@gump.apache.org. Project commons-scxml-test has an issue affecting its community integration. This

[GUMP@vmgump]: Project commons-jelly-tags-jmx (in module commons-jelly) failed

2012-07-22 Thread Gump
To whom it may engage... This is an automated request, but not an unsolicited one. For more information please visit http://gump.apache.org/nagged.html, and/or contact the folk at gene...@gump.apache.org. Project commons-jelly-tags-jmx has an issue affecting its community integration.

Re: [chain2] configuration façade APIs

2012-07-22 Thread Oliver Heger
Is there any relation or overlap to [configuration]? Depending on your concrete requirements, this is probably over-sized. But maybe a source of inspiration? Oliver Am 22.07.2012 10:00, schrieb Elijah Zupancic: Thanks! On Sat, Jul 21, 2012 at 11:54 PM, Simone Tripodi

Re: [math] Eigen decomposition of real asymmetric matrices

2012-07-22 Thread Thomas Neidhart
On 07/18/2012 10:55 PM, Thomas Neidhart wrote: Hi, I finalized now this feature request (MATH-235) by adding more random data test which success for an epsilon of 1e-12, which imho is pretty good for now. For the problem with the internal DecompositionSolver, I now throw an

Re: [chain2] configuration façade APIs

2012-07-22 Thread Simone Tripodi
Good point Oliver, I honestly didn't think about [configuration], please apologize! since [chain] already had a way to be configured via an XML wrapper around the Digester, we thought it would have been good having a façade and plug other textual format... Anyway, we are open to suggestions -

Re: [Math] Little thought about multi-threading

2012-07-22 Thread Phil Steitz
On 7/21/12 6:17 AM, Gilles Sadowski wrote: Hi. My previous post (with subject Synchronisation) made me think (again) that it might be useful to start considering how to take advantage of multi-threading in Commons Math. Indeed, it seems that some parts of the library might end up not being

[math] API proposal for differentiation

2012-07-22 Thread Luc Maisonobe
Hi all, A few months ago, Gilles proposed to add an implementation of the Ridder's algorithm for differentiation (see https://issues.apache.org/jira/browse/MATH-726). After some discussion the issue was postponed, waiting for an API for this family of algorithms. Last week, at work, someone

Re: [math] Eigen decomposition of real asymmetric matrices

2012-07-22 Thread Luc Maisonobe
On 22/07/2012 17:09, Thomas Neidhart wrote: On 07/18/2012 10:55 PM, Thomas Neidhart wrote: Hi, Hi Thomas, I finalized now this feature request (MATH-235) by adding more random data test which success for an epsilon of 1e-12, which imho is pretty good for now. For the problem with the

Re: [Math] Little thought about multi-threading

2012-07-22 Thread Ted Dunning
I don't believe that there are any commons math algorithms that would benefit from execution in a Hadoop map-reduce style. The issue is that iterative algorithms are essentially incompatible with the very large startup costs of map-reduce programs under Hadoop. Some algorithms can be recast to

Re: [math] API proposal for differentiation

2012-07-22 Thread Phil Steitz
On 7/22/12 9:35 AM, Luc Maisonobe wrote: Hi all, A few months ago, Gilles proposed to add an implementation of the Ridder's algorithm for differentiation (see https://issues.apache.org/jira/browse/MATH-726). After some discussion the issue was postponed, waiting for an API for this family of

[GUMP@vmgump]: Project commons-exec-test (in module apache-commons) failed

2012-07-22 Thread Gump
To whom it may engage... This is an automated request, but not an unsolicited one. For more information please visit http://gump.apache.org/nagged.html, and/or contact the folk at gene...@gump.apache.org. Project commons-exec-test has an issue affecting its community integration. This

Re: [pool][dbcp] Move AbandonedObjectPool in v 2's?

2012-07-22 Thread Phil Steitz
On 7/22/12 12:16 PM, Mark Thomas wrote: On 21/07/2012 17:51, Phil Steitz wrote: On 7/20/12 1:47 PM, Mark Thomas wrote: On 16/07/2012 20:55, Phil Steitz wrote: On 7/15/12 10:46 AM, Phil Steitz wrote: On 7/15/12 1:12 AM, Mark Thomas wrote: On 15/07/2012 01:38, Phil Steitz wrote: Sorry if this

Re: [chain2] configuration façade APIs

2012-07-22 Thread Oliver Heger
Hi Simo, Am 22.07.2012 17:54, schrieb Simone Tripodi: Good point Oliver, I honestly didn't think about [configuration], please apologize! since [chain] already had a way to be configured via an XML wrapper around the Digester, we thought it would have been good having a façade and plug other

Re: [math] Eigen decomposition of real asymmetric matrices

2012-07-22 Thread Gilles Sadowski
On Sun, Jul 22, 2012 at 06:39:02PM +0200, Luc Maisonobe wrote: On 22/07/2012 17:09, Thomas Neidhart wrote: On 07/18/2012 10:55 PM, Thomas Neidhart wrote: Hi, Hi Thomas, I finalized now this feature request (MATH-235) by adding more random data test which success for an epsilon of

Re: [Math] Little thought about multi-threading

2012-07-22 Thread Oliver Heger
Am 22.07.2012 21:01, schrieb Ted Dunning: I don't believe that there are any commons math algorithms that would benefit from execution in a Hadoop map-reduce style. The issue is that iterative algorithms are essentially incompatible with the very large startup costs of map-reduce programs under

Re: [math] API proposal for differentiation

2012-07-22 Thread Gilles Sadowski
On Sun, Jul 22, 2012 at 12:44:07PM -0700, Phil Steitz wrote: On 7/22/12 9:35 AM, Luc Maisonobe wrote: Hi all, A few months ago, Gilles proposed to add an implementation of the Ridder's algorithm for differentiation (see https://issues.apache.org/jira/browse/MATH-726). After some

Re: [Math] Little thought about multi-threading

2012-07-22 Thread Gilles Sadowski
On Sun, Jul 22, 2012 at 09:27:17AM -0700, Phil Steitz wrote: On 7/21/12 6:17 AM, Gilles Sadowski wrote: Hi. My previous post (with subject Synchronisation) made me think (again) that it might be useful to start considering how to take advantage of multi-threading in Commons Math.

Re: [Math] Little thought about multi-threading

2012-07-22 Thread Gilles Sadowski
On Sun, Jul 22, 2012 at 12:01:01PM -0700, Ted Dunning wrote: I don't believe that there are any commons math algorithms that would benefit from execution in a Hadoop map-reduce style. The issue is that iterative algorithms are essentially incompatible with the very large startup costs of

Re: [Math] Little thought about multi-threading

2012-07-22 Thread Phil Steitz
On 7/22/12 2:14 PM, Gilles Sadowski wrote: On Sun, Jul 22, 2012 at 09:27:17AM -0700, Phil Steitz wrote: On 7/21/12 6:17 AM, Gilles Sadowski wrote: Hi. My previous post (with subject Synchronisation) made me think (again) that it might be useful to start considering how to take advantage of

Re: [pool][dbcp] Move AbandonedObjectPool in v 2's?

2012-07-22 Thread Phil Steitz
On 7/22/12 12:16 PM, Mark Thomas wrote: On 21/07/2012 17:51, Phil Steitz wrote: On 7/20/12 1:47 PM, Mark Thomas wrote: On 16/07/2012 20:55, Phil Steitz wrote: On 7/15/12 10:46 AM, Phil Steitz wrote: On 7/15/12 1:12 AM, Mark Thomas wrote: On 15/07/2012 01:38, Phil Steitz wrote: Sorry if this

Re: [Math] JIRA Road Map panel

2012-07-22 Thread Gilles Sadowski
On Sun, Jul 22, 2012 at 11:36:35AM +0200, Luc Maisonobe wrote: On 22/07/2012 03:58, Gilles Sadowski wrote: Hi. In this panel https://issues.apache.org/jira/browse/MATH#selectedTab=com.atlassian.jira.plugin.system.project%3Aroadmap-panel there appears sections for the following

[Math] Random tests sometimes fail (r1363105)

2012-07-22 Thread Gilles Sadowski
Hi Thomas. I've encountered a failure of one the tests which you introduced in revision 1363105. Here is an excerpt of the error: --- testNormalDistributionUnsymmetricMatrix(org.apache.commons.math3.linear.EigenDecompositionTest) Time elapsed: 0.044 sec FAILURE! java.lang.AssertionError: The

RE: [Math] Random tests sometimes fail (r1363105)

2012-07-22 Thread Becksfort, Jared
That is a good idea. I will add that to the multivariate normal distribution unit tests that I recently sent. From: Gilles Sadowski [gil...@harfang.homelinux.org] Sent: Sunday, July 22, 2012 5:44 PM To: dev@commons.apache.org Subject: [Math] Random tests

Re: [chain2] configuration façade APIs

2012-07-22 Thread Elijah Zupancic
Hi Oliver, Configuration seems like it might be useful if I end up redoing the XML configuration portion. Are there any plans to support YAML? Thanks, -Elijah On Sun, Jul 22, 2012 at 1:16 PM, Oliver Heger oliver.he...@oliver-heger.de wrote: Hi Simo, Am 22.07.2012 17:54, schrieb Simone

Re: [Math] Little thought about multi-threading

2012-07-22 Thread Thomas Neidhart
On 07/22/2012 11:25 PM, Gilles Sadowski wrote: [...] Threaded execution, on the other hand, can be very, very helpful for a number of math algorithms and thread management inside commons math is a very reasonable option in those cases. This would provide a performance boost with very