Re: Citations: strip braces {} in titles in bibliographies in basic style?

2024-05-06 Thread William Denton
x > > entry parser according to the spec. > > Fixed, on main. > There is no formal Bibtex format reference, so approximate parsing has to do. > https://git.savannah.gnu.org/cgit/emacs/org-mode.git/commit/?id=d2df9624c Thanks for coming back to this months later and making it be

Re: [POLL] Should we enable or disable automatic tag alignment by default everywhere

2024-04-17 Thread William Denton
uspect people using variable pitches will already have this turned on, and making it the default won't bother them. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Seeing all the steps when I run an R code block

2024-04-09 Thread William Denton
setwd('/home/wtd/books') > > > I just tested with the latest version of ESS and I am no longer able to > reproduce the problem. > > Do you still see it on your side? Thanks for following up. No, I don't see it any more ... an ESS upgrade or something fixed the problem. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Question about citation formatting

2024-03-27 Thread William Denton
yword use_this" to print the references. This means if you edit a source's metadata you might need to do it in two places, but it would let you think, "Do I want to cite by translator or author here?" Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

check.sh setup.sh, nohup.out

2024-03-19 Thread William Denton
Some unusual files sneaked in with commit 37cd00bb120. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Bug (?): org-fontify-quote-and-verse-blocks

2024-03-18 Thread William Denton
this: #+begin_quote This is a quote. #+end_quote Put pointer inside the quote block and run `M-x describe-text-properties`. It says that the face is org-block, not org-quote as expected: There are text properties here: face (org-block) Bill -- William Denton https

Re: Things got very slow: profiler output

2024-03-17 Thread William Denton
now have it set to '(script entities). Both 'latex and 'native gave me the problems, but this works.) Thanks again, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Things got very slow: profiler output

2024-03-16 Thread William Denton
and Bruno, might it help if we did a video call and shared screens to see problems live? My Lisp is limited but I'll help how I can. Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada Debugger entered--Lisp error: (er

Best way to make the Org source tree?

2024-03-13 Thread William Denton
update $ git pull && make Is that right? Is `make autoloads` needed? What should I be running? I ask because I suddenly wondered if I'd been doing this wrong and it was triggering a problem. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private inve

Re: Things got very slow: profiler output

2024-03-13 Thread William Denton
.com/wdenton/.emacs.d/blob/master/init.org#org Thanks for looking at this problem, Ihor. If there's anything else to try, I'll try it. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Things got very slow: profiler output

2024-03-09 Thread William Denton
On Thursday, March 7th, 2024 at 11:12, William Denton wrote: > I recompiled Emacs and Org last night and closed all my buffers except for > two medium-sized ones, neither with any LaTeX in them. I restarted and spent > a minute or two with one buffer, closing and expanding headings,

Re: Emacs slow-down

2024-03-07 Thread William Denton
mon about our configurations. Might it be a package that's getting in the way, and a change there is causing this? Or does the profiling show it's in base Org? Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Things got very slow: profiler output

2024-03-07 Thread William Denton
e-folds 156 0%re-search-forward ... I'm happy to try anything else ... Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: R session error (org-babel)

2024-03-06 Thread William Denton
documentation: then I made an r.org file with the snippet and ran it, and it worked: # #+begin_src R :session test A <- 1 #+end_src # Cheers, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: R session error (org-babel)

2024-03-05 Thread William Denton
, but we can help with that. I can look for a snippet of code if you need one. Cheers, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Things got very slow: profiler output

2024-02-28 Thread William Denton
% org-fontify-drawers 4 0% org-raise-scripts 28 0%+ font-lock-unfontify-region 4 0%+ font-lock-extend-region-wholelines 4 0% text-property-any 30951 29% + command-execute ... -- William Denton

Re: [DISCUSSION] What should we do with undocumented x^(superscript inside /round/ braces) syntax? (was: Subscript with parenthesis)

2024-02-17 Thread William Denton
ne was using it (perhaps by accident) it will be easy to change when necessary. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: (jit-lock-function 1) signaled (error "Stack overflow in regexp matcher")

2024-02-15 Thread William Denton
On Thursday, February 15th, 2024 at 15:40, William Denton wrote: > I am having a problem I've never seen before: Org can't handle anything more > in a large file I have! > > This file is where I keep my notes day to day for work, with headings for > months and days and cat

(jit-lock-function 1) signaled (error "Stack overflow in regexp matcher")

2024-02-15 Thread William Denton
matting is all lost. I turned on debugging and restarted, and got a big stack trace, which I will paste in below. If "marker at 770" means line 770 then I don't know what's going on, because it's just regular stuff there and around it. What can I do to determine where the problem is? Any he

Re: Help: How to change faces of words between parenthesis

2024-02-13 Thread William Denton
sl-activate That might involve changing your whole citation process, which is a big step, but citations are on my mind so I thought I'd mention it. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada > > > > Best regards

Re: An academic journal made entirely in Org-Mode

2024-01-29 Thread William Denton
ect. (And what citation style is used by that journal?) Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Basic citations: problems with quotes in LaTeX export

2024-01-20 Thread William Denton
mentary I could certainly imagine them, for example where you want to refer to a certain word or mention how an author translates it. In any case there's something unexpected going on here. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Basic citations: bugs with citation objects with multiple keys, prefixes, suffixes

2024-01-15 Thread William Denton
12}, location = {Berlin}, publisher = {Springer}, doi = {10.1007/978-3-642-23816-1}, isbn = {9783642238161} } -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Basic citations: should default citation style have a name and style code?

2024-01-14 Thread William Denton
d make Org lose the formatting on links and they would show [[in their raw naked form]]. I know someone else had this problem too, so I'm noting this for anyone searching the archives for Swiper. Thanks to you both for your help, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and

Re: Basic citations: should default citation style have a name and style code?

2024-01-13 Thread William Denton
On Sunday, January 14th, 2024 at 00:08, William Denton wrote: > While we're talking about citations, I'm stuck on something else. If I run > "C-c C-x @" to insert a citation into a file, I'm shown a list of > bibliography entries and I can go up and down and hit

Re: Basic citations: should default citation style have a name and style code?

2024-01-13 Thread William Denton
king a patch to make it clearer. Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada > > -- > Ihor Radchenko // yantar92, > Org mode contributor, > Learn more about Org mode at https://orgm

Re: Basic citations: should default citation style have a name and style code?

2024-01-11 Thread William Denton
uff nonsense Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada > > -- > Ihor Radchenko // yantar92, > Org mode contributor, > Learn more about Org mode at https://orgmode.org/. > > Support Org development

Re: Basic citations: should default citation style have a name and style code?

2024-01-11 Thread William Denton
;Export CITATION object. STYLE is the expected citation style, as a pair of strings or nil." And then there's a section below starting: ;; Default ("nil") style. Now that I know what that does, I can sort of see what's going on. The same thing is in the CSL code as well, so i

Basic citations: should default citation style have a name and style code?

2024-01-10 Thread William Denton
ne-letter code "d" then I think the problem would go away. With thanks to everyone who did all the great citation work originally, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: #5 [[bbb:OrgMeetup]] on Wed, Jan 17, 19:00 UTC+3

2024-01-09 Thread William Denton
rope/Istanbul> Thanks for organizing another one, Ihor. So I make sure I have the time right, it's at 1600 UTC, so this will give anyone the correct local time? (With apologies for stepping outside Org.) $ date -d '17 January 2024 16:00 UTC' Bill -- William Denton https://www.miskatonic.org/ Libra

Re: [PATCH] Set Python shell in Org edit buffer

2024-01-07 Thread William Denton
il reading this.) I fixed it by simplifying my R setup and removing some hooks and such, and now things work reasonably and I'm familiar with what happens when. Having an option to control this would be a helpful addition. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: strange error exporting to ascii

2023-12-21 Thread William Denton
ng to various formats lately, testing out basic and CSL citations, and ran into a few bugs but not what you're showing. And nothing about ODT was touched, IIRC. Could you try narrowing down to citations only, and commenting out one by one until it works? Bill -- William Denton https://www.misk

Re: Citations bug with basic processor, plain bibliographies, LaTeX

2023-12-18 Thread William Denton
On 18 December 2023, Ihor Radchenko wrote: Sigh... Fixed, on main. (I hope) https://git.savannah.gnu.org/cgit/emacs/org-mode.git/commit/?id=41726d408 Fixed! Thanks. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO

Re: Citations bug with basic processor, plain bibliographies, LaTeX

2023-12-18 Thread William Denton
d! Thanks, Bill On 15 December 2023, William Denton wrote: I've found a bug on main that I think is related to the recent patches about raw string objects. Try this as Basic.bib: @book{friends, title = {{{LaTeX}} and Friends}, author = {van Dongen, M.R.C.}, date = {2012}, location = {Berlin},

Citations bug with basic processor, plain bibliographies, LaTeX

2023-12-15 Thread William Denton
argument: stringp, (raw nil #("van Dongen, M.R.C." 0 18 (:parent #0))) Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 421.80 ppm (Mauna Loa Observatory, 2023-12-14)

Re: Citations: strip braces {} in titles in bibliographies in basic style?

2023-12-13 Thread William Denton
is with LaTeX. Thanks for the history. "If this doesn't fit your needs for org mode, I suggest you develop a LaTeX parser that can process LaTeX code according to your needs." Ah well. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigato

Re: Strange behaviour detected today

2023-12-13 Thread William Denton
¹). Bill ¹ https://github.com/bbatsov/solarized-emacs/issues/447 -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 421.99 ppm (Mauna Loa Observatory, 2023-12-12)

Citations: strip braces {} in titles in bibliographies in basic style?

2023-12-12 Thread William Denton
le will have to edit them out in every basic export. Bill ¹ https://retorque.re/zotero-better-bibtex/support/faq/#why-the-double-braces -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 421.66 ppm (Mauna Loa Observatory, 2023-12-11)

Re: [PATCH] Add new option 'org-imenu-flatten'

2023-12-08 Thread William Denton
years ago. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 420.74 ppm (Mauna Loa Observatory, 2023-12-07)

Re: Citations and basic processor: examples of some things that don't work

2023-12-07 Thread William Denton
-basic and other oc-* backends. I'll have a look in there and see if I can add some. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 420.04 ppm (Mauna Loa Observatory, 2023-12-01)

Re: Citations and basic processor: examples of some things that don't work

2023-12-06 Thread William Denton
r. I hope you don't mind opening up that file one last time for this fix ... Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 420.04 ppm (Mauna Loa Observatory, 2023-12-01)

Re: Citations and basic processor: examples of some things that don't work

2023-11-29 Thread William Denton
On 29 November 2023, Ihor Radchenko wrote: William Denton writes: Attached (I think attachments work on this list) is a small Org file that has a table that sets out all the various options possible with the basic processor for citations. Most work, but not the author style, and the caps

Citations and basic processor: examples of some things that don't work

2023-11-28 Thread William Denton
to square brackets, for example (cite/t/c:@friends) to [cite/t/c:@friends], and exporting. From what I see in oc-basic.el, everything in the table should work. Changing the processor to use CSL, they all do. Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist

Re: Citation bug with basic and nb style: no matching number on bibliographic entry

2023-11-27 Thread William Denton
Ignore this. To make the numbering appear in the bibliography, use this: #+cite_export: basic numeric I'm working my way through all the combinations and will submit some patches for the documentation when I have it figured out more. Bill On 27 November 2023, William Denton wrote: I'm

Citation bug with basic and nb style: no matching number on bibliographic entry

2023-11-27 Thread William Denton
You can't connect (1) to Chassell, Robert. (Using two sources doesn't make numbers suddenly appear.) Using the CSL processor and the IEEE style (the sort of style on which I assume the basic nb style is based) the citation is [1] and the book is listed as [1] in the bibliography. Bill

Citation bug with print_bibliography :filter "keyword phrase" with spaces

2023-11-23 Thread William Denton
graphy and the Emacs bibliography are there, but the "keyword phrase" one isn't. The manual says, "Values including spaces must be surrounded with double quotes." I did that, but based on this it doesn't seem to be working. (I'm running Org from the development

Citation bug: cite/a does not work with basic

2023-11-22 Thread William Denton
and we get this error: Wrong type argument: characterp, raw However, change it to cite/n: or cite/t: or just plain cite: and it will work. I think it should work with cite/a, but I'm not sure what's going on. Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licens

Re: org-agenda t giving "Wrong type argument: stringp, nil"

2023-10-16 Thread William Denton
was fine. Whew! Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 419.81 ppm (Mauna Loa Observatory, 2023-10-15)

org-agenda t giving "Wrong type argument: stringp, nil"

2023-10-10 Thread William Denton
-secondary-string: Prevent altering current buffer cache I can't tell what's going on, but I hope this helps identify something. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 418.33 ppm (Mauna Loa Observatory, 2023-10-09)

How to hide square brackets around [[url][links]]?

2023-09-21 Thread William Denton
d the file. Should these commands be reformatting all the links in the buffer, and the fact they don't work is a sign of the bug? Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 418.58 ppm (Mauna Loa Observatory, 2023-09-20)

Wider margins on text, but no margins on tables?

2023-08-18 Thread William Denton
hack. Any related tips or configurations would be welcome too. Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 419.19 ppm (Mauna Loa Observatory, 2023-08-17)

Re: [SUMMARY] [[bbb:OrgMeetup]] on Wed, Aug 9, 19:00 UTC+3 (was: Interest in an Org video meetup?)

2023-08-11 Thread William Denton
interesting seeing how others make great use of some parts of Org I use very little. And of course just seeing what someone else's Emacs looks like is always fun. (For those who weren't there: No one had their camera on, it was screen-sharing and people talking.) Bill -- William Denton

Re: BUG: org-cycle does not unfold some subtrees

2023-08-04 Thread William Denton
the search would fail or throw an error or require me to collapse headings before it would work, but that hasn't happened in a while and I didn't try to debug it. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 421.92

Re: Preserving leading zeros

2023-05-28 Thread William Denton
before it's added to the catalogue. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 424.57 ppm (Mauna Loa Observatory, 2023-05-27)

Preserving leading zeros

2023-05-28 Thread William Denton
n removing it later, but that's a bit ugly. Has anyone had this problem and worked around it some other way? Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 424.57 ppm (Mauna Loa Observatory, 2023-05-27)

Re: BUG: org-cycle does not unfold some subtrees

2023-05-12 Thread William Denton
om/abo-abo/swiper -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 423.90 ppm (Mauna Loa Observatory, 2023-05-11)

Re: BUG: org-cycle does not unfold some subtrees

2023-05-11 Thread William Denton
On 11 May 2023, Ihor Radchenko wrote: William Denton writes: Do you use evil-mode? Definitely not. Curious. This function is supposed to be run upon finishing or aborting isearch. What is the value of `isearch-mode-end-hook' in your Org buffers? (anzu--reset-mode-line org-fold-core

Re: BUG: org-cycle does not unfold some subtrees

2023-05-11 Thread William Denton
On 11 May 2023, Ihor Radchenko wrote: William Denton writes: Does it also help if you run M-: (org-fold-core--clear-isearch-overlays)? That worked! I just had the problem. I ran that, and the tree popped open! Do you use evil-mode? Definitely not. Bill -- William Denton https

Re: BUG: org-cycle does not unfold some subtrees

2023-05-10 Thread William Denton
reproduce it at will. Does it also help if you run M-: (org-fold-core--clear-isearch-overlays)? That worked! I just had the problem. I ran that, and the tree popped open! Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada C

Re: BUG: org-cycle does not unfold some subtrees

2023-05-09 Thread William Denton
in there. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 424.26 ppm (Mauna Loa Observatory, 2023-05-08)

Re: Why am I being told to use "straight.el"?

2023-04-21 Thread William Denton
de it go away. (I find I need to do that a couple of times a year, for one reason or another.) Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 423.25 ppm (Mauna Loa Observatory, 2023-04-20)

Clocktable :formatter to record time in hours or work-days

2023-04-11 Thread William Denton
k-days? I only want this formatting for this table, I have other clocktables in the same file I don't want to change. I've read about clocktables and the :formatter option, which I assume is what will do it, but I can't find any helpful examples so I'm stuck. Thanks for any help, Bill --

Re: [BUG] Incorrect display of folded headings after cycling with subheading with VISIBILITY content/children

2023-02-14 Thread William Denton
described) Ihor did some work but the problem is still going on now and then, in the sort of way that seems unreproducible to me. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada CO₂: 421.18 ppm (Mauna Loa Observatory

Re: LaTeX tutorial (focused on what Org exports) ??

2023-01-06 Thread William Denton
: \titleformat{\section} {\centering\Large}{\thesection}{}{} #+LATEX_HEADER: \titleformat{\subsubsection}[drop]{\itshape}{\thesection}{}{}{} #+LATEX_HEADER: \titlespacing{\subsubsection}{0.75in}{\baselineskip}{0.5in} Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed

How to make change the appearance of org-date inside a drawer?

2023-01-05 Thread William Denton
n text email, of course.) describe-char there tells me the timestamp has the face org-date. Is there a way to make org-date smaller when it's in a drawer? I don't want to make a global setting for it, because I often use dates in headings. Thanks, Bill -- William Denton https://www.miskatonic

Re: LaTeX tutorial (focused on what Org exports) ??

2023-01-02 Thread William Denton
the other recommendations, it's worth looking at the user guide for the memoir class, which is great for books: https://www.ctan.org/pkg/memoir It'll be somewhere on your system as memman.pdf. I learned a lot about page design and LaTeX from it. Cheers, Bill -- William Denton https

Re: org-persist files in /tmp

2022-12-21 Thread William Denton
e on Monday ago, and I may have rebuilt Emacs and Org then, and maybe restarted Emacs, but not nineteen times. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Org functions in source blocks

2022-12-11 Thread William Denton
ked so far will keep me busy. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Images generated by R code blocks do not display

2022-12-11 Thread William Denton
files where I'm updating data and images a few times a week, and when this broke it was a real pain---particularly because everything had worked so well for so long. Now my life is easy again. I appreciate your work on this and everything else, Ihor. Bill -- William Denton https

Org functions in source blocks

2022-12-09 Thread William Denton
uot;x" '(remote(test_table, @I$A..@II$A)) nil)) But running org-lookup-all on its own like this gives result nil, not something with some xs in it. Why not? #+begin_src emacs-lisp :results raw (org-lookup-all "x" '(remote(test_table, @I$A..@II$A)) nil) #+end_src Thanks,

Re: Images generated by R code blocks do not display

2022-12-08 Thread William Denton
nothing needs to be generated on the fly. As a reminder for anyone else having this problem, where updated images don't appear, this will refresh them: M-: (clear-image-cache) Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: [BUG] ob-R.el: extra empty data.frame columns generated from plain lists after recent change [9.6 (release_9.6-3-ga4d38e @ /usr/share/emacs/30.0.50/lisp/org/)]

2022-12-06 Thread William Denton
this, but if it used to become rows of a table, let's keep it that way. In R we might think of the list as a vector, I guess, but there's no way to represent that nicely in Org, though it is easy to step through the rows of a column or table. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist

Re: Displaying macros differently

2022-12-04 Thread William Denton
sion about evaluating the macros and showing the result, but I don't think that's possible. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: [BUG] ob-R: session evaluation returns empty ouputs with Org 9.6 [9.6 ( @ /home/fsantos/.emacs.d/elpa/org-9.6/)]

2022-11-30 Thread William Denton
didn't fix it. :( With a minimal setup, running the R block with a :session makes it ask where the working directory should be (the default in the prompt is the directory the test Org file is in). Setting ess-startup-directory to 'default-directory doesn't change that, or the output problem. Bill

Re: Images generated by R code blocks do not display

2022-11-28 Thread William Denton
): Support region. (org-display-inline-images): Fix refresh argument logic. (org-remove-inline-images): Support region. ... Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Images generated by R code blocks do not display

2022-11-28 Thread William Denton
is useful, but: 16. Edit source code back to 300x300 17. C-c C-c yes 18. Image disappears 19. C-c C-x C-v 20. 300x300 image appears (a new one? or the first one?) 21. Move the cursor to the image 22. The now incorrect 500x300 appears while the cursor is on it, same as 15 Bill -- William De

Re: Images generated by R code blocks do not display

2022-11-23 Thread William Denton
On 24 November 2022, Ihor Radchenko wrote: William Denton writes: What if you run M-: (clear-image-cache) before C-c C-x C-v? That does it! Strange. I am unable to reproduce the issue on my side (using the earlier bash code block you provided). What is your Emacs version? I refreshed

Re: Images generated by R code blocks do not display

2022-11-23 Thread William Denton
On 24 November 2022, Ihor Radchenko wrote: William Denton writes: + C-c C-c (execute R block again) + answer yes to "Evaluate this?" question + image disappears + C-c C-x C-v (to see image) + image is still 300 pixels square! What if you run M-: (clear-image-cache) before C

Re: Images generated by R code blocks do not display

2022-11-23 Thread William Denton
C-c C-x C-v (to see image) + image is 500 x 500! So R is generating a new, larger image, and it's there on disk, but Emacs won't show it. Thanks again, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Images generated by R code blocks do not display

2022-11-23 Thread William Denton
Thanks, Bill On 24 November 2022, Ihor Radchenko wrote: William Denton writes: In Emacs: + C-x C-f (load r.org wherever it is) + C-c C-c (to execute the R code) + Say yes to "Evaluate this R code block on your system?" + #RESULTS block appears (good) but image does not show + C-

Images generated by R code blocks do not display

2022-11-22 Thread William Denton
code block is run or rerun, and C-c C-X C-v (org-toggle-inline-images) should toggle the setting, not keep it off. Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Seeing all the steps when I run an R code block

2022-11-22 Thread William Denton
, this will stop that: (setq ess-startup-directory 'default-directory) ;; "Always start the process in the directory of the current file" But I have another R problem that does seem to be with Org, coming next ... Bill -- William Denton https://www.miskatonic.org/ Librarian, artist an

Seeing all the steps when I run an R code block

2022-11-14 Thread William Denton
is going on, but I can't see why. Is there some way I can see all the steps that are happening when I hit C-c C-c on that code block? Or maybe there's some other way to figure it out? Any suggestions welcome. Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed

[BUG] Cache warning [9.6-pre (release_9.5.5-1086-g7f7280 @ /usr/local/src/org-mode/lisp/)]

2022-11-08 Thread William Denton
) ) ("ftp" :follow (closure ((scheme . "ftp")) (url arg) (browse-url (concat scheme ":" url) arg) ) ) ("help" :follow org-link--open-help :store org-link--store-help) ("file" :complete org-link-complete-file) ("elisp" :follow org-link--open-elisp) ) org-metaup-hook '(org-babel-load-in-session-maybe) org-startup-with-inline-images t org-return-follows-link t org-special-ctrl-a/e t org-tags-column 120 org-hide-macro-markers t org-footnote-section nil org-list-allow-alphabetical t ) -- -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: R code blocks in org version 9.5

2022-10-19 Thread William Denton
, though I've never put "output" in such a block: I always use ":results graphics file". Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: R code blocks in org version 9.5

2022-10-18 Thread William Denton
session code blocks pretty much every day. Can you narrow it down any? Does even the most basic block, just adding 1 + 1, not work? What about with emacs -Q? Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Reinstalling compat fixed everything breaking

2022-09-14 Thread William Denton
why my configuration works now but yours still doesn't. I hope someone who knows more about all this can pitch in. Bill ¹ Configured so: (use-package org :pin manual :load-path "/usr/local/src/org-mode/lisp" :init ;; Lots of stuff here ) -- William Denton https://www.mis

Reinstalling compat fixed everything breaking

2022-09-13 Thread William Denton
einstall compat" did the trick and now everything works. In case someone else has the same problem I thought I'd mention this. Cheers, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Simple but repetitive http links

2022-09-07 Thread William Denton
line and it probably will. Welcome to Org! Bill ¹ https://orgmode.org/org.html#The-Very-Busy-C_002dc-C_002dc-Key -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Recent folding issues

2022-07-11 Thread William Denton
nothing, and Shift-TAB would expand /some/ headlines but not the one where the pointer was! So I'm in the same boat as you, and trying various things to figure out what's going on. Cheers, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator

Re: Folded headlines with text showing where it shouldn't

2022-07-11 Thread William Denton
On 3 June 2022, Ihor Radchenko wrote: William Denton writes: For me, this looks like either a mixed installation (please post the output of M-x org-version) or some third-party package misbehaving. M-x org-version says: Org mode version 9.5.3 (release_9.5.3-511-g8e69ad @ /usr/local/src

Re: Change both width and height of R plot in SRC block

2022-06-30 Thread William Denton
.) If this doesn't work, please give a reproducible example, and we can figure it out. The code you quote doesn't work because we don't have the cost data. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Utility of description lists

2022-06-17 Thread William Denton
descriptive text. Sometimes I use them when there's an obvious term/description pairing, and sometimes when I have a text-heavy list of things and I want to have a brief summary of each to make it easier to read. Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed

Re: Folded headlines with text showing where it shouldn't

2022-06-02 Thread William Denton
your excellent folding work that would let me check some value or variable that would be helpful when I see such a problem? Some way of inspecting the state of something that might be useful? Thanks, Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private

Folded headlines with text showing where it shouldn't

2022-05-30 Thread William Denton
t's a link that is displayed out of place. (This is with Emacs and Org built from source on 22 May; Org was at 8e69adabe2026. Maybe it's been fixed since then but I haven't seen this mentioned, so I thought I'd grab a screenshot while I could.) Bill -- William Denton https://www.miskatonic.org/ Librari

Re: export regions of a org files to other formats (most likely only to a buffer).

2022-05-25 Thread William Denton
e's also C-v to toggle "visible only" export, which I've never used.) Or would it work to add a heading for the paragraph temporarily, just for export? Bill -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: [BUG] when open a large org file, emacs get stuck and show a warning "org-element--cache: Unregistered buffer modifications detected"

2022-05-17 Thread William Denton
faul value and disable org-indent-mode , open the large org file, everything works fine -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

Re: Tips on using Org-mode to manage a reading list

2022-05-16 Thread William Denton
On 16 May 2022, William Denton wrote: Your plan looks very much like something I saw on Planet Emacslife¹ a week or two ago ... but now I can't find it because it scrolled off the bottom. Maybe someone else here saw it? Or is the one who wrote it? It was someone using properties to store

Re: Tips on using Org-mode to manage a reading list

2022-05-16 Thread William Denton
with, it'll be easy to refine and adapt in a month or six depending on what you need. Bill ¹ https://planet.emacslife.com/ ² https://www.zotero.org/ -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

ivy-done and "Unregistered buffer modifications detected"

2022-05-10 Thread William Denton
ot; :follow #[514 "\301\300\302Q\"\207" ["ftp" browse-url ":"] 6 "\n\n(fn URL ARG)"] ) ("help" :follow org-link--open-help :store org-link--store-help) ("file" :complete org-link-complete-file) ("elisp" :follow org-link--open-elisp) ) org-metaup-hook '(org-babel-load-in-session-maybe) org-startup-with-inline-images t org-return-follows-link t org-special-ctrl-a/e t org-tags-column 120 org-hide-macro-markers t org-footnote-section nil org-list-allow-alphabetical t ) -- -- William Denton https://www.miskatonic.org/ Librarian, artist and licensed private investigator. Toronto, Canada

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