Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci
In directory fdv4jf1.ch3.sourceforge.com:/tmp/cvs-serv31305
Modified Files:
gromacs.info
Log Message:
fixed numerous issues now works for 10.5, 10.6, long PATH values, thanks to
Allen Wilter
Index: gromacs.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/gromacs.info,v
retrieving revision 1.16
retrieving revision 1.17
diff -u -d -r1.16 -r1.17
--- gromacs.info 11 Sep 2009 03:29:53 -0000 1.16
+++ gromacs.info 21 Sep 2009 18:11:39 -0000 1.17
@@ -1,8 +1,8 @@
Package: gromacs
Version: 4.0.5
-Revision: 1000
-Depends: %N-shlibs (= %v-%r), fftw3-shlibs, x11, openmotif3-shlibs
-BuildDepends: fftw3, x11-dev
+Revision: 1003
+Depends: %N-shlibs (= %v-%r), fftw3-shlibs, x11, openmotif4-shlibs, gsl-shlibs
+BuildDepends: fftw3, x11-dev, gsl
BuildConflicts: gromacs-dev (<< %v-%r)
BuildDependsOnly: false
Source: mirror:custom:%n-%v.tar.gz
@@ -10,42 +10,55 @@
Primary: ftp://ftp.gromacs.org/pub/gromacs/
<<
Source-MD5: 2db2261852a4d3a97547979f379dee94
-ConfigureParams: --enable-shared --prefix=%p --exec-prefix=%p --mandir=%p/share
+ConfigureParams: --enable-shared --prefix=%p --exec-prefix=%p
--mandir=%p/share --with-x --with-gsl --x-includes=/usr/X11/include
--x-libraries=/usr/X11/lib
DocFiles: AUTHORS COPYING README
PatchScript: <<
#!/bin/zsh -efv
+perl -pi.bak -e 's|512|4096|g' src/gmxlib/futil.c
perl -pi.bak -e 's|/bin/csh|/bin/csh -f|g' share/**/* 2>/dev/null
perl -pi.bak -e 's|/lib/cpp|/usr/bin/cpp|g' share/**/* 2>/dev/null
<<
CompileScript: <<
-#!/bin/bash -ev
-if [ `uname -p` = "powerpc" ]; then
-./configure %c --enable-ppc-altivec
+#!/bin/bash -efv
+
+flag64=""
+if [[ %m == "x86_64" ]]; then
+ flag64="--enable-apple-64bit"
+fi
+
+if [[ $(uname -p) == "powerpc" ]]; then
+./configure %c --enable-ppc-altivec
else
-./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.`
--host=%m-apple-darwin`uname -r|cut -f1 -d.`
+./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.`
--host=%m-apple-darwin`uname -r|cut -f1 -d.` $flag64
fi
num_cpu=$(echo `sysctl -n hw.ncpu`)
make -j $num_cpu
<<
InstallScript: <<
-#!/bin/bash -ev
+#!/bin/bash -efv
+
+flag64=""
+if [[ %m == "x86_64" ]]; then
+ flag64="--enable-apple-64bit"
+fi
+
mkdir -p %i/include/%n
make install DESTDIR=%d
make clean
-if [ `uname -p` = "powerpc" ]; then
+if [ $(uname -p) = "powerpc" ]; then
./configure %c --enable-ppc-altivec --disable-float --program-suffix="_d"
else
-./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.`
--host=%m-apple-darwin`uname -r|cut -f1 -d.` --disable-float
--program-suffix="_d"
+./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.`
--host=%m-apple-darwin`uname -r|cut -f1 -d.` --disable-float
--program-suffix="_d" $flag64
fi
num_cpu=$(echo `sysctl -n hw.ncpu`)
make -j $num_cpu
+make install DESTDIR=%d
<<
SplitOff: <<
Package: %N-shlibs
-Depends: fftw3-shlibs, x11, openmotif3-shlibs
+Depends: fftw3-shlibs, x11, openmotif4-shlibs
Files: <<
- lib/libgmx.5.0.0.dylib
lib/libgmx.5.dylib
lib/libgmxana.5.0.0.dylib
lib/libgmxana.5.dylib
@@ -70,7 +83,7 @@
<<
SplitOff2: <<
Package: %N-dev
-Depends: %N-shlibs (= %v-%r), fftw3-shlibs, x11, openmotif3-shlibs
+Depends: %N-shlibs (= %v-%r), fftw3-shlibs, x11, openmotif4-shlibs
Files: <<
lib/*.a
lib/*.la
@@ -80,7 +93,6 @@
lib/libmd_d.dylib
lib/libgmx_d.dylib
lib/libgmxana_d.dylib
- lib/libmd_d.dylib
<<
BuildDependsOnly: True
DocFiles: AUTHORS COPYING README
@@ -90,8 +102,8 @@
GROMACS is a versatile and extremely well optimized package
to perform molecular dynamics computer simulations and
subsequent trajectory analysis. It is developed for
-biomolecules like proteins, but the extremely high
-performance means it is used also in several other field
+biomolecules like proteins, but the extremely high
+performance means it is used also in several other field
like polymer chemistry and solid state physics. This
version has the dynamic libs and executables.
The directories tutor, top, template and html are in
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