Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci
In directory fdv4jf1.ch3.sourceforge.com:/tmp/cvs-serv22395
Modified Files:
pdb2pqr.info
Log Message:
fix bizarro build of pdb2pqr
Index: pdb2pqr.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/pdb2pqr.info,v
retrieving revision 1.11
retrieving revision 1.12
diff -u -d -r1.11 -r1.12
--- pdb2pqr.info 29 Nov 2008 11:46:31 -0000 1.11
+++ pdb2pqr.info 14 Apr 2009 01:06:39 -0000 1.12
@@ -1,18 +1,23 @@
Package: pdb2pqr
-Version: 1.3.0
-Revision: 2
+Version: 1.4.0
+Revision: 1
Source: mirror:sourceforge:%n/%n-%v.tar.gz
-Source-MD5: be38f746cfede22b8ebb5d4bdeac3305
+Source-MD5: 2ff9907c06b5420cf52e73717fb01a9d
SourceDirectory: %n-%v
-Depends: numeric-py25, python25
-BuildDepends: fort77
+Depends: numeric-py26, python26, (%m != x86_64) gcc43-shlibs, (%m = x86_64)
gcc44-shlibs
+BuildDepends: python, python26, (%m != x86_64) gcc43, (%m = x86_64) gcc44
Description: Converts pdb files to pqr
NoSetCPPFLAGS: true
NoSetLDFLAGS: true
-ConfigureParams: py_path=%p/bin/python2.5
CompileScript: <<
#!/bin/zsh -efv
-./configure --with-max-atoms="1000000" --without-url
--with-python=%p/bin/python2.5 --with-f77=fort77
+perl -pi -e 's|fort xlf95 lf95 g95|fort xlf95 lf95 g95 gfortran|g'
./propka/configure
+perl -pi -e 's|/usr/bin/python|%p/bin/python2.6|g' ./pdb2pka/pka.py
+perl -pi -e 's|/usr/bin/python|%p/bin/python2.6|g' ./src/psize.py
+perl -pi -e 's|-Wl,-framework -Wl,Python
-bundle|%p/lib/python2.6/config/libpython2.6.dylib -bundle|g' ./configure
+perl -pi -e 's|-Wl,-framework -Wl,Python
-bundle|%p/lib/python2.6/config/libpython2.6.dylib -bundle|g' ./propka/configure
+rm -fr contrib
+./configure --with-max-atoms="1000000" --without-url
--with-python=%p/bin/python2.6 --with-f77=gfortran
make
rm -f **/*.o
<<
@@ -22,11 +27,11 @@
cp -R * %i/share/pdb2pqr
#
mkdir -p %i/bin
-echo "#\!/bin/zsh -f" >| %i/bin/pdb2pqr
+echo "#!/bin/zsh -f" >| %i/bin/pdb2pqr
echo "%p/share/pdb2pqr/pdb2pqr.py \"\...@\" " >>| %i/bin/pdb2pqr
chmod a+x %i/bin/pdb2pqr
#
-echo "#\!/bin/zsh -f" >| %i/bin/propka
+echo "#!/bin/zsh -f" >| %i/bin/propka
echo "%p/share/pdb2pqr/propka/propka \"\...@\" " >>| %i/bin/propka
chmod a+x %i/bin/propka
<<
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