Re: [Fink-devel] Got a bunch of .info from a helpful user

[John Lillibridge]

Thanks Alexander,

I'm happy to report that gromacs[-mpi] built without a hitch under 10.12 beta 
4, after updating the finkinfo files:

System Version: macOS 10.12 (16A286a)

Developer Tools:
  Version: 8.0 (8S188o)
  Location: /Applications/Xcode-beta.app

Applications:
  Xcode: 8.0 (11222.4)

> fink list gromacs

Information about 9784 packages read in 1 seconds.
 i   gromacs   5.1.1-100Molecular dynamics package
 i   gromacs-dev   5.1.1-100Molecular dynamics package
 gromacs-mpi   5.1.1-100Molecular dynamics package 
(Parallel version)
 gromacs-mpi-dev   5.1.1-100Molecular dynamics package 
(Parallel version)
 i   gromacs1-mpi-shlibs   5.1.1-100Molecular dynamics package 
(Parallel version)
 i   gromacs1-shlibs   5.1.1-100Molecular dynamics package

Cheers,
John

> On Aug 10, 2016, at 12:17 , Alexander Hansen  
> wrote:
> 
> To my direct email, unfortunately. We really need to get the distribution 
> moved to git so that this kind of thing can be handled via a pull request.
> 
> Anyway, I’ve now got a bunch of .infos which have been test-built on the 
> 10.12 beta, only one of which is for a package for which I am the maintainer 
> of record.  :
> 
> app-defaults.info matplotlib-py.info
> apple-gdb.infomodule-build-pm-10.12.info
> business-isbn-data-pm-10.12.info  module-refresh-pm-10.12.info
> capture-tiny-pm-10.12.infomodule-scandeps-pm-10.12.info
> cpan-changes-pm-10.12.infonetpacket-pm.info
> cwd-guard-pm-10.12.info   ocaml.info
> data-compare-pm-10.12.infopackage-generator-pm-10.12.info
> devel-checkcompiler-pm-10.12.info pegex-pm-10.12.info
> devel-stacktrace-pm-10.12.infoperl5162.info
> dynaloader-functions-pm-10.12.infopo4a-10.12.info
> expect-5.45.info  pod-markdown-pm-10.12.info
> experimental-pm-10.12.infoqt4-base-x11-4.7.3.info
> extutils-makemaker-pm-10.12.info  readonly-pm-10.12.info
> file-finder-pm-10.12.info rec-descent-pm-10.12.info
> fink-10.12.info   #   rstudio-desktop.info
> fixpath-10.12.info *  rstudio-server.info
> ghc-10.12.infosub-infix-pm-10.12.info
> git-remote-mediawiki.info tcltk-8.6.6.info
> git-send-email.info   test-data-pm-10.12.info
> git-svn.info  test-reporter-pm.info
> git.info  test-requires-pm-10.12.info
> gnucash2-10.12.info   test-sharedfork-pm-10.12.info
> gromacs-mpi.info  test-simple-pm-10.12.info
> gromacs.info  test-synopsis-pm-10.12.info
> help2man-perl.infotest-yaml-valid-pm-10.12.info
> icon-naming-utils-10.12.info  tkimg-1.3.info
> intltool40-10.12.info tktreectrl-2.4.1.info
> irssi.infotree-dag-node-pm-10.12.info
> itk-4.0.2.infotree-simple-pm-10.12.info
> iwidgets-4.0.1.info   type-tie-pm-10.12.info
> librasqal3-shlibs-10.12.info  viennarna.info
> llvm-gcc42-10.12.info xinitrc.info @
> log-log4perl-pm-10.12.infoxmkmf.info
> math-matrixreal-pm-10.12.info yaml-tiny-pm-10.12.info
> 
> Notes:
> # Autogenerated from the fink source, so this one will be excluded
> * Mine, so I updated the package.
> @ I just removed the Distribution: 10.8, 10.9, 10.10, 10.11 tag instead
> 
> There’s a a tracker item with an updated gromacs, so I’ll probably merge the 
> changes here onto it and post that onto the tracker for approval.
> 
> I haven’t looked through just yet, but I believe a fair number of these 
> changes are just to add 10.12 to the eligible distributions.  Unless people 
> have strong objections, I’ll just do that. Any packages that have a more 
> extensive update will be posted on the tracker for maintainer evaluation.
> -- 
> Alexander Hansen, Ph.D.
> Fink User Liaison

--
What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are 
consuming the most bandwidth. Provides multi-vendor support for NetFlow, 
J-Flow, sFlow and other flows. Make informed decisions using capacity 
planning reports. http://sdm.link/zohodev2dev
___
Fink-devel mailing list
Fink-devel@lists.sourceforge.net
List archive:
http://news.gmane.org/gmane.os.apple.fink.devel
Subscription management:
https://lists.sourceforge.net/lists/listinfo/fink-devel

[Fink-devel] Got a bunch of .info from a helpful user

[Alexander Hansen]

To my direct email, unfortunately.  We really need to get the distribution 
moved to git so that this kind of thing can be handled via a pull request.

Anyway, I’ve now got a bunch of .infos which have been test-built on the 10.12 
beta, only one of which is for a package for which I am the maintainer of 
record.  :

app-defaults.info   matplotlib-py.info
apple-gdb.info  module-build-pm-10.12.info
business-isbn-data-pm-10.12.infomodule-refresh-pm-10.12.info
capture-tiny-pm-10.12.info  module-scandeps-pm-10.12.info
cpan-changes-pm-10.12.info  netpacket-pm.info
cwd-guard-pm-10.12.info ocaml.info
data-compare-pm-10.12.info  package-generator-pm-10.12.info
devel-checkcompiler-pm-10.12.info   pegex-pm-10.12.info
devel-stacktrace-pm-10.12.info  perl5162.info
dynaloader-functions-pm-10.12.info  po4a-10.12.info
expect-5.45.infopod-markdown-pm-10.12.info
experimental-pm-10.12.info  qt4-base-x11-4.7.3.info
extutils-makemaker-pm-10.12.inforeadonly-pm-10.12.info
file-finder-pm-10.12.info   rec-descent-pm-10.12.info
fink-10.12.info #   rstudio-desktop.info
fixpath-10.12.info *rstudio-server.info
ghc-10.12.info  sub-infix-pm-10.12.info
git-remote-mediawiki.info   tcltk-8.6.6.info
git-send-email.info test-data-pm-10.12.info
git-svn.infotest-reporter-pm.info
git.infotest-requires-pm-10.12.info
gnucash2-10.12.info test-sharedfork-pm-10.12.info
gromacs-mpi.infotest-simple-pm-10.12.info
gromacs.infotest-synopsis-pm-10.12.info
help2man-perl.info  test-yaml-valid-pm-10.12.info
icon-naming-utils-10.12.infotkimg-1.3.info
intltool40-10.12.info   tktreectrl-2.4.1.info
irssi.info  tree-dag-node-pm-10.12.info
itk-4.0.2.info  tree-simple-pm-10.12.info
iwidgets-4.0.1.info type-tie-pm-10.12.info
librasqal3-shlibs-10.12.infoviennarna.info
llvm-gcc42-10.12.info   xinitrc.info @
log-log4perl-pm-10.12.info  xmkmf.info
math-matrixreal-pm-10.12.info   yaml-tiny-pm-10.12.info

Notes:
# Autogenerated from the fink source, so this one will be excluded
* Mine, so I updated the package.
@ I just removed the Distribution: 10.8, 10.9, 10.10, 10.11 tag instead



There’s a a tracker item with an updated gromacs, so I’ll probably merge the 
changes here onto it and post that onto the tracker for approval.

I haven’t looked through just yet, but I believe a fair number of these changes 
are just to add 10.12 to the eligible distributions.  Unless people have strong 
objections, I’ll just do that.  Any packages that have a more extensive update 
will be posted on the tracker for maintainer evaluation.
-- 
Alexander Hansen, Ph.D.
Fink User Liaison


--
What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are 
consuming the most bandwidth. Provides multi-vendor support for NetFlow, 
J-Flow, sFlow and other flows. Make informed decisions using capacity 
planning reports. http://sdm.link/zohodev2dev
___
Fink-devel mailing list
Fink-devel@lists.sourceforge.net
List archive:
http://news.gmane.org/gmane.os.apple.fink.devel
Subscription management:
https://lists.sourceforge.net/lists/listinfo/fink-devel

Re: [Fink-devel] aclocal.m4 error compiling under 10.12

[Daniel Macks]

On Tue, 9 Aug 2016 11:52:39 -0700, Alexander Hansen 
 wrote:

> > On Aug 6, 2016, at 20:42, Daniel Macks  wrote:
> > > On Sat, 6 Aug 2016 11:56:46 -0700, Alexander Hansen > 
>  wrote:
> >>> On Aug 6, 2016, at 11:50, John Lillibridge  wrote:
>  I managed to get Fink to build via bootstrap under 10.12 beta >> 
> (now 3). But certain packages fail to compile with the following >> 
> types of errors when checking dependencies:
>  fink-package-precedence --no-headers .  Scanning binaries 
> for incorrect dyld linking...  >> 
> /Applications/Xcode-beta.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/objdump:
>  'aclocal.m4': The file was not recognized as a valid object >> file.  
> fatal error: >> 
> /Applications/Xcode-beta.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/otool:
>  internal objdump command >> 
> failed
>  Error reading /usr/bin/otool -L: 256
>  I get the same type of error using the Xcode-8-beta app as well 
> >> as the Command Line Tools.  Any ideas how to work around this?
> >> >> Apple decided to change the behavior of otool for Xcode 8 (how 
> nice >> of them) and it now throws an error instead of silently 
> ignoring >> non-object files. >> >> As a workaround, change line 263 
> of /sw/bin/pathsetup.sh to my $otool >> = '/usr/bin/otool-classic’
> >> >> (I don’t have the Xcode 8 command-line tools deployed, so 
> I’m not >> 100% sure that otool-classic is accessible there, however.)
> > > I uploaded a new version of fink-package-precedence (0.19-1) that 
> uses > "otool-classic" if present (falling back to "otool" if not), 
> which > should resolve the problem. Please let me know--I don't have 
> xcode8, so > I'm just implementing what Alexander, and several others 
> on IRC and > other places, have reported. > > dan
> > > > --
> > Daniel Macks
> > dma...@netspace.org
> > otool-classic appears to be buried:
>
> 11:35am] howarth: note that otool-clasic is buried in 
> /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
>  and 
> /Library/Developer/CommandLineTools/usr/bin
> [11:38am] I guess we’d want to check the command-line tools location first. 

Done in f-p-p 0.20
 
dan
 

--
Daniel Macks
dma...@netspace.org
 


--
What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are 
consuming the most bandwidth. Provides multi-vendor support for NetFlow, 
J-Flow, sFlow and other flows. Make informed decisions using capacity 
planning reports. http://sdm.link/zohodev2dev
___
Fink-devel mailing list
Fink-devel@lists.sourceforge.net
List archive:
http://news.gmane.org/gmane.os.apple.fink.devel
Subscription management:
https://lists.sourceforge.net/lists/listinfo/fink-devel