[Freesurfer] R: Re: R: Re: R: Re: R: Re: thalami mask (nii.gz) to import in FSL

2014-04-29 Thread stdp82
...@wustl.edu, Freesurfer support listfreesurfer@nmr.mgh.harvard.edu Ogg: Re: [Freesurfer] R: Re: R: Re: R: Re: thalami mask (nii.gz) to import in FSL You need to overlay the thalamus ROI on the T1 from which it was derived, so that I have a reference for the anatomy. It is very unlikely

Re: [Freesurfer] R: Re: R: Re: R: Re: R: Re: thalami mask (nii.gz) to import in FSL

2014-04-29 Thread Harms, Michael
: [Freesurfer] R: Re: R: Re: R: Re: thalami mask (nii.gz) to import in FSL You need to overlay the thalamus ROI on the T1 from which it was derived, so that I have a reference for the anatomy. It is very unlikely that FSLview is ignoring the orientation information. cheers, -MH -- Michael Harms

Re: [Freesurfer] R: Re: R: Re: R: Re: R: Re: thalami mask (nii.gz) to import in FSL

2014-04-29 Thread Harms, Michael
To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu, Harms, Michael mha...@wustl.edu Subject: R: Re: [Freesurfer] R: Re: R: Re: R: Re: thalami mask (nii.gz) to import in FSL I'm trying to do it. But I have an error. It shoud be due to difference in size? In freeviewer the files